RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 A0A1B0GW54 56 aa7.02□□□□□ -1.28
PTPRN-204ENST00000423636 FLG2Q5D862 2391 aaPredicted RBP7.02□□□□□ -1.29
PTPRN-204ENST00000423636 MP68P56378 58 aa7.02□□□□□ -1.29
PTPRN-204ENST00000423636 C1orf195Q5TG92 126 aa7.02□□□□□ -1.29
PTPRN-204ENST00000423636 C1orf64Q8NEQ6 169 aa7.01□□□□□ -1.29
PTPRN-204ENST00000423636 ZNF706Q9Y5V0 76 aaPredicted RBP7□□□□□ -1.29
PTPRN-204ENST00000423636 LINC00483Q53H64 154 aa6.99□□□□□ -1.29
PTPRN-204ENST00000423636 C8orf17Q9NRJ1 99 aa6.99□□□□□ -1.29
PTPRN-204ENST00000423636 DYNC1H1Q14204 4646 aaKnown RBP6.99□□□□□ -1.29
PTPRN-204ENST00000423636 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
PTPRN-204ENST00000423636 NDUFC1O43677 76 aa6.98□□□□□ -1.29
PTPRN-204ENST00000423636 SPTSSBQ8NFR3 76 aa6.98□□□□□ -1.29
PTPRN-204ENST00000423636 A0A1B0GVX0 72 aa6.96□□□□□ -1.3
PTPRN-204ENST00000423636 ZCCHC13Q8WW36 166 aaKnown RBP6.96□□□□□ -1.3
PTPRN-204ENST00000423636 V9GYY9 64 aa6.96□□□□□ -1.3
PTPRN-204ENST00000423636 TRAV22A0A0B4J277 110 aa6.94□□□□□ -1.3
PTPRN-204ENST00000423636 PLA2G1BP04054 148 aaKnown RBP6.94□□□□□ -1.3
PTPRN-204ENST00000423636 Q5W150 140 aa6.94□□□□□ -1.3
PTPRN-204ENST00000423636 DMBT1Q9UGM3 2413 aaPredicted RBP6.94□□□□□ -1.3
PTPRN-204ENST00000423636 LCE6AA0A183 80 aa6.91□□□□□ -1.3
PTPRN-204ENST00000423636 PRR26Q8N8Z3 221 aa6.91□□□□□ -1.3
PTPRN-204ENST00000423636 SEC61GP60059 68 aa6.91□□□□□ -1.3
PTPRN-204ENST00000423636 CD164Q04900 197 aa6.89□□□□□ -1.31
PTPRN-204ENST00000423636 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
PTPRN-204ENST00000423636 MRPL34Q9BQ48 92 aaKnown RBP6.89□□□□□ -1.31
PTPRN-204ENST00000423636 APOBP04114 4563 aaKnown RBP6.87□□□□□ -1.31
PTPRN-204ENST00000423636 A8MUN3 132 aa6.86□□□□□ -1.31
PTPRN-204ENST00000423636 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
PTPRN-204ENST00000423636 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
PTPRN-204ENST00000423636 KRTAP1-4P0C5Y4 121 aa6.86□□□□□ -1.31
PTPRN-204ENST00000423636 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
PTPRN-204ENST00000423636 Q6ZSA8 131 aa6.86□□□□□ -1.31
PTPRN-204ENST00000423636 TYMSOSQ8TAI1 123 aa6.86□□□□□ -1.31
PTPRN-204ENST00000423636 MYCBP2O75592 4640 aa6.85□□□□□ -1.31
PTPRN-204ENST00000423636 A8MU10 97 aa6.84□□□□□ -1.31
PTPRN-204ENST00000423636 RYR3Q15413 4870 aa6.84□□□□□ -1.31
PTPRN-204ENST00000423636 PMAIP1Q13794 54 aa6.84□□□□□ -1.31
PTPRN-204ENST00000423636 RYR2Q92736 4967 aa6.84□□□□□ -1.31
PTPRN-204ENST00000423636 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
PTPRN-204ENST00000423636 LINC00313P59037 77 aa6.82□□□□□ -1.32
PTPRN-204ENST00000423636 C4orf48Q5BLP8 95 aa6.82□□□□□ -1.32
PTPRN-204ENST00000423636 PRR15LQ9BU68 103 aa6.82□□□□□ -1.32
PTPRN-204ENST00000423636 SSBP3-AS1Q7Z2R9 100 aa6.81□□□□□ -1.32
PTPRN-204ENST00000423636 IGKV2D-30A0A075B6S6 120 aa6.8□□□□□ -1.32
PTPRN-204ENST00000423636 IGKV2-30P06310 120 aa6.8□□□□□ -1.32
PTPRN-204ENST00000423636 SPAG11AQ6PDA7 123 aa6.8□□□□□ -1.32
PTPRN-204ENST00000423636 A6NED7 52 aa6.79□□□□□ -1.32
PTPRN-204ENST00000423636 COA5Q86WW8 74 aa6.79□□□□□ -1.32
PTPRN-204ENST00000423636 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
PTPRN-204ENST00000423636 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
PTPRN-204ENST00000423636 TP53AIP1Q9HCN2 124 aa6.74□□□□□ -1.33
PTPRN-204ENST00000423636 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
PTPRN-204ENST00000423636 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
PTPRN-204ENST00000423636 HRES1P13985 223 aa6.71□□□□□ -1.33
PTPRN-204ENST00000423636 IGLV7-46A0A075B6I9 117 aa6.71□□□□□ -1.34
PTPRN-204ENST00000423636 LINC00304Q8N9R0 145 aa6.7□□□□□ -1.34
PTPRN-204ENST00000423636 SPINK1P00995 79 aa6.7□□□□□ -1.34
PTPRN-204ENST00000423636 H3BPC8 53 aa6.68□□□□□ -1.34
PTPRN-204ENST00000423636 Q8N1X5 172 aa6.68□□□□□ -1.34
PTPRN-204ENST00000423636 PKHD1L1Q86WI1 4243 aa6.67□□□□□ -1.34
PTPRN-204ENST00000423636 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
PTPRN-204ENST00000423636 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.35
PTPRN-204ENST00000423636 EPPK1P58107 5090 aaKnown RBP6.64□□□□□ -1.35
PTPRN-204ENST00000423636 A0A1B0GVY2 172 aa6.64□□□□□ -1.35
PTPRN-204ENST00000423636 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
PTPRN-204ENST00000423636 LIMD2Q9BT23 127 aa6.64□□□□□ -1.35
PTPRN-204ENST00000423636 Q5VV11 94 aa6.63□□□□□ -1.35
PTPRN-204ENST00000423636 Q1T7F1 81 aa6.63□□□□□ -1.35
PTPRN-204ENST00000423636 LOC101927531A0A1B0GV80 90 aa6.62□□□□□ -1.35
PTPRN-204ENST00000423636 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
PTPRN-204ENST00000423636 C8orf87E5RJ46 101 aa6.61□□□□□ -1.35
PTPRN-204ENST00000423636 HSPG2P98160 4391 aa6.61□□□□□ -1.35
PTPRN-204ENST00000423636 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
PTPRN-204ENST00000423636 KRTAP21-3Q3LHN1 58 aa6.6□□□□□ -1.35
PTPRN-204ENST00000423636 C7orf65Q6ZTY9 151 aa6.58□□□□□ -1.36
PTPRN-204ENST00000423636 KRTAP10-4P60372 401 aaPredicted RBP6.57□□□□□ -1.36
PTPRN-204ENST00000423636 RYR1P21817 5038 aa6.57□□□□□ -1.36
PTPRN-204ENST00000423636 SPINK7P58062 85 aa6.56□□□□□ -1.36
PTPRN-204ENST00000423636 LPAP08519 4548 aa6.54□□□□□ -1.36
PTPRN-204ENST00000423636 Q5VSD8 79 aa6.53□□□□□ -1.36
PTPRN-204ENST00000423636 ACYP2P14621 99 aa6.52□□□□□ -1.37
PTPRN-204ENST00000423636 LCA10Q71F78 164 aa6.51□□□□□ -1.37
PTPRN-204ENST00000423636 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
PTPRN-204ENST00000423636 TNXBP22105 4242 aa6.49□□□□□ -1.37
PTPRN-204ENST00000423636 RBM12B-AS1Q9P1G2 102 aa6.48□□□□□ -1.37
PTPRN-204ENST00000423636 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
PTPRN-204ENST00000423636 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
PTPRN-204ENST00000423636 LRP2P98164 4655 aa6.46□□□□□ -1.38
PTPRN-204ENST00000423636 KTN1-AS1Q86SY8 53 aa6.45□□□□□ -1.38
PTPRN-204ENST00000423636 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
PTPRN-204ENST00000423636 A0A1B0GU69 56 aa6.41□□□□□ -1.38
PTPRN-204ENST00000423636 ATP11AUNQ6ZP68 121 aa6.41□□□□□ -1.38
PTPRN-204ENST00000423636 Q75L30 129 aa6.4□□□□□ -1.39
PTPRN-204ENST00000423636 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
PTPRN-204ENST00000423636 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
PTPRN-204ENST00000423636 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
PTPRN-204ENST00000423636 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
PTPRN-204ENST00000423636 A8MUU9 505 aa6.32□□□□□ -1.4
PTPRN-204ENST00000423636 C20orf166-AS1Q96NR2 134 aa6.32□□□□□ -1.4
PTPRN-204ENST00000423636 MUC2Q02817 5179 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms