RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 UQCR10Q9UDW1 63 aa1.4□□□□□ -2.18
VPS13A-208ENST00000423463 PRO1854Q9UHT4 67 aa1.4□□□□□ -2.18
VPS13A-208ENST00000423463 hADV29S1A0JD25 119 aa1.4□□□□□ -2.19
VPS13A-208ENST00000423463 MOBPQ13875 183 aa1.4□□□□□ -2.19
VPS13A-208ENST00000423463 DEFB105AQ8NG35 78 aa1.4□□□□□ -2.19
VPS13A-208ENST00000423463 FXYD2P54710 66 aa1.39□□□□□ -2.19
VPS13A-208ENST00000423463 C9orf153Q5TBE3 101 aa1.39□□□□□ -2.19
VPS13A-208ENST00000423463 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.39□□□□□ -2.19
VPS13A-208ENST00000423463 PPDPFLQ8WWR9 84 aa1.39□□□□□ -2.19
VPS13A-208ENST00000423463 MYCBP2O75592 4640 aa1.39□□□□□ -2.19
VPS13A-208ENST00000423463 A0A1B0GX51 115 aa1.39□□□□□ -2.19
VPS13A-208ENST00000423463 H7C2G1 150 aa1.39□□□□□ -2.19
VPS13A-208ENST00000423463 CD164Q04900 197 aa1.39□□□□□ -2.19
VPS13A-208ENST00000423463 OCIAD2Q56VL3 154 aa1.39□□□□□ -2.19
VPS13A-208ENST00000423463 FP248Q71RG6 208 aaPredicted RBP1.39□□□□□ -2.19
VPS13A-208ENST00000423463 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
VPS13A-208ENST00000423463 F8WEM9 126 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 BATFQ16520 125 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 Q6ZQY7 126 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 SNHG12Q9BXW3 62 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 KMT2DO14686 5537 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 COX6CP09669 75 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 Q6JHZ5 121 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 Q8N9L7 120 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 LIMD2Q9BT23 127 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 H3BQ85 93 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 M0R143 59 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 PSMB2P49721 201 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 Q5XG85 94 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 RETNLBQ9BQ08 111 aa1.38□□□□□ -2.19
VPS13A-208ENST00000423463 K7ERJ3 54 aa1.37□□□□□ -2.19
VPS13A-208ENST00000423463 TPRXLQ17RH7 258 aa1.37□□□□□ -2.19
VPS13A-208ENST00000423463 SCGB1C2P0DMR2 95 aa1.37□□□□□ -2.19
VPS13A-208ENST00000423463 KRTAP6-3Q3LI67 103 aa1.37□□□□□ -2.19
VPS13A-208ENST00000423463 HRCT1Q6UXD1 115 aa1.37□□□□□ -2.19
VPS13A-208ENST00000423463 TCL1BO95988 128 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 DNAL4O96015 105 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 TRACP01848 142 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 FABP2P12104 132 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 IGFL1Q6UW32 110 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 CLEC2BQ92478 149 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 NAA38Q9BRA0 125 aaKnown RBP1.36□□□□□ -2.19
VPS13A-208ENST00000423463 ORMDL1Q9P0S3 153 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 A0A0G2JQZ4 141 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 TRBV7-7A0A0K0K1E9 115 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 TMEM256-PLSCR3K7ERE1 68 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 ASB16-AS1Q495Z4 193 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 Q6Q795 121 aa1.36□□□□□ -2.19
VPS13A-208ENST00000423463 TNXBP22105 4242 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 H3BMG7 143 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 LST1O00453 97 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 C1orf195Q5TG92 126 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 TEN1Q86WV5 123 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 HMCN2Q8NDA2 5059 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 FAT4Q6V0I7 4981 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 H3BUT2 72 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 COL5A1-AS1Q5SY13 56 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 ANKRD29Q8N6D5 301 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 SS18L2Q9UHA2 77 aa1.35□□□□□ -2.19
VPS13A-208ENST00000423463 TAX1BP3O14907 124 aa1.34□□□□□ -2.19
VPS13A-208ENST00000423463 BAALC-AS2P0C853 105 aa1.34□□□□□ -2.19
VPS13A-208ENST00000423463 ATXN8Q156A1 80 aa1.34□□□□□ -2.19
VPS13A-208ENST00000423463 LYRM7Q5U5X0 104 aa1.34□□□□□ -2.19
VPS13A-208ENST00000423463 FSIP2Q5CZC0 6907 aa1.34□□□□□ -2.19
VPS13A-208ENST00000423463 TRBV20-1A0A075B6N2 111 aa1.34□□□□□ -2.2
VPS13A-208ENST00000423463 TRBV7-4A0A0J9YYF1 115 aa1.33□□□□□ -2.2
VPS13A-208ENST00000423463 A0A1W2PNM2 257 aa1.33□□□□□ -2.2
VPS13A-208ENST00000423463 RBM3P98179 157 aaKnown RBP1.33□□□□□ -2.2
VPS13A-208ENST00000423463 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
VPS13A-208ENST00000423463 A0A087WSZ3 146 aa1.33□□□□□ -2.2
VPS13A-208ENST00000423463 A0A1B0GVX0 72 aa1.33□□□□□ -2.2
VPS13A-208ENST00000423463 JMJD7-PLA2G4BH0Y9G9 81 aa1.33□□□□□ -2.2
VPS13A-208ENST00000423463 DEFB116Q30KQ4 102 aa1.33□□□□□ -2.2
VPS13A-208ENST00000423463 DSCR8Q96T75 97 aa1.33□□□□□ -2.2
VPS13A-208ENST00000423463 A0A0U1RQV1 116 aa1.32□□□□□ -2.2
VPS13A-208ENST00000423463 A0A1B0GW54 56 aa1.32□□□□□ -2.2
VPS13A-208ENST00000423463 A0A1W2PPM0 123 aa1.32□□□□□ -2.2
VPS13A-208ENST00000423463 C9JAW5 83 aa1.32□□□□□ -2.2
VPS13A-208ENST00000423463 CCKP06307 115 aa1.32□□□□□ -2.2
VPS13A-208ENST00000423463 PDE6GP18545 87 aa1.32□□□□□ -2.2
VPS13A-208ENST00000423463 A0A1B0GV90 55 aa1.32□□□□□ -2.2
VPS13A-208ENST00000423463 C9orf92A6NGG3 77 aa1.32□□□□□ -2.2
VPS13A-208ENST00000423463 SPCS1Q9Y6A9 102 aa1.32□□□□□ -2.2
VPS13A-208ENST00000423463 LOC110117498A0A087WWA1 95 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 A0A1B0GV72 72 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 H3BT86 120 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 PP632Q6XCG6 107 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 Q96NJ1 140 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 K7EP34 96 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 RPL37P61927 97 aaKnown RBP1.31□□□□□ -2.2
VPS13A-208ENST00000423463 Q6ZQT0 140 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 OBSCN-AS1Q96MR7 158 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 VPS25Q9BRG1 176 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 LINC00472Q9H8W2 130 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 LRP2P98164 4655 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 J3KT08 172 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 IGKV4-1P06312 121 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 PCOTHQ58A44 107 aa1.31□□□□□ -2.2
VPS13A-208ENST00000423463 Q5W150 140 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms