RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 LUZP6Q538Z0 58 aa10.34□□□□□ -0.75
TRAPPC10-203ENST00000422875 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
TRAPPC10-203ENST00000422875 TENM4Q6N022 2769 aa10.32□□□□□ -0.76
TRAPPC10-203ENST00000422875 LINC00483Q53H64 154 aa10.32□□□□□ -0.76
TRAPPC10-203ENST00000422875 KRTAP7-1Q8IUC3 87 aa10.3□□□□□ -0.76
TRAPPC10-203ENST00000422875 CAMK2N1Q7Z7J9 78 aa10.3□□□□□ -0.76
TRAPPC10-203ENST00000422875 KRTAP10-2P60368 255 aa10.29□□□□□ -0.76
TRAPPC10-203ENST00000422875 A8MU10 97 aa10.29□□□□□ -0.76
TRAPPC10-203ENST00000422875 KRTAP10-1P60331 282 aa10.27□□□□□ -0.77
TRAPPC10-203ENST00000422875 S4R3F8 94 aa10.23□□□□□ -0.77
TRAPPC10-203ENST00000422875 LCE6AA0A183 80 aa10.23□□□□□ -0.77
TRAPPC10-203ENST00000422875 HRNRQ86YZ3 2850 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC10-203ENST00000422875 RPL37P61927 97 aaKnown RBP10.2□□□□□ -0.78
TRAPPC10-203ENST00000422875 SPATA8Q6RVD6 105 aa10.2□□□□□ -0.78
TRAPPC10-203ENST00000422875 ASPMQ8IZT6 3477 aa10.2□□□□□ -0.78
TRAPPC10-203ENST00000422875 TENM3Q9P273 2699 aa10.17□□□□□ -0.78
TRAPPC10-203ENST00000422875 H1FX-AS1Q4G0G2 97 aa10.16□□□□□ -0.78
TRAPPC10-203ENST00000422875 A6NN06 94 aa10.14□□□□□ -0.79
TRAPPC10-203ENST00000422875 ROMO1P60602 79 aa10.12□□□□□ -0.79
TRAPPC10-203ENST00000422875 R4GN34 69 aa10.12□□□□□ -0.79
TRAPPC10-203ENST00000422875 ADM2Q7Z4H4 148 aa10.11□□□□□ -0.79
TRAPPC10-203ENST00000422875 ZFHX4Q86UP3 3567 aa10.1□□□□□ -0.79
TRAPPC10-203ENST00000422875 RELNP78509 3460 aa10.07□□□□□ -0.8
TRAPPC10-203ENST00000422875 Q6ZRN7 208 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC10-203ENST00000422875 MXRA5Q9NR99 2828 aa10.02□□□□□ -0.81
TRAPPC10-203ENST00000422875 ASB16-AS1Q495Z4 193 aa10.02□□□□□ -0.81
TRAPPC10-203ENST00000422875 KRTAP13-1Q8IUC0 172 aa9.98□□□□□ -0.81
TRAPPC10-203ENST00000422875 LAMA5O15230 3695 aa9.97□□□□□ -0.81
TRAPPC10-203ENST00000422875 M0QZ58 72 aa9.96□□□□□ -0.81
TRAPPC10-203ENST00000422875 M0R2T5 61 aa9.94□□□□□ -0.82
TRAPPC10-203ENST00000422875 Q5VSD8 79 aa9.94□□□□□ -0.82
TRAPPC10-203ENST00000422875 KRTAP13-2Q52LG2 175 aa9.92□□□□□ -0.82
TRAPPC10-203ENST00000422875 TENM1Q9UKZ4 2725 aa9.91□□□□□ -0.82
TRAPPC10-203ENST00000422875 MUC3AQ02505 3323 aa9.91□□□□□ -0.82
TRAPPC10-203ENST00000422875 CELSR1Q9NYQ6 3014 aa9.9□□□□□ -0.82
TRAPPC10-203ENST00000422875 A0A0A0MQY5 61 aa9.87□□□□□ -0.83
TRAPPC10-203ENST00000422875 KRTAP25-1Q3LHN0 102 aa9.87□□□□□ -0.83
TRAPPC10-203ENST00000422875 CSMD1Q96PZ7 3565 aa9.86□□□□□ -0.83
TRAPPC10-203ENST00000422875 PKD1L1Q8TDX9 2849 aa9.82□□□□□ -0.84
TRAPPC10-203ENST00000422875 PDZD2O15018 2839 aa9.82□□□□□ -0.84
TRAPPC10-203ENST00000422875 SEC61BP60468 96 aaKnown RBP9.8□□□□□ -0.84
TRAPPC10-203ENST00000422875 CUBNO60494 3623 aa9.79□□□□□ -0.84
TRAPPC10-203ENST00000422875 DMDP11532 3685 aa9.79□□□□□ -0.84
TRAPPC10-203ENST00000422875 SMG1Q96Q15 3661 aaKnown RBP9.75□□□□□ -0.85
TRAPPC10-203ENST00000422875 TGP01266 2768 aa9.73□□□□□ -0.85
TRAPPC10-203ENST00000422875 VWFP04275 2813 aa9.67□□□□□ -0.86
TRAPPC10-203ENST00000422875 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
TRAPPC10-203ENST00000422875 NDUFAF8A1L188 74 aa9.65□□□□□ -0.86
TRAPPC10-203ENST00000422875 SVEP1Q4LDE5 3571 aa9.64□□□□□ -0.87
TRAPPC10-203ENST00000422875 A8MUU9 505 aa9.6□□□□□ -0.87
TRAPPC10-203ENST00000422875 KRTAP16-1A8MUX0 517 aa9.6□□□□□ -0.87
TRAPPC10-203ENST00000422875 FBN1P35555 2871 aaKnown RBP9.59□□□□□ -0.87
TRAPPC10-203ENST00000422875 TENM2Q9NT68 2774 aa9.55□□□□□ -0.88
TRAPPC10-203ENST00000422875 SRRM2Q9UQ35 2752 aaKnown RBP9.51□□□□□ -0.89
TRAPPC10-203ENST00000422875 C20orf166-AS1Q96NR2 134 aa9.47□□□□□ -0.89
TRAPPC10-203ENST00000422875 KRTAP1-4P0C5Y4 121 aa9.44□□□□□ -0.9
TRAPPC10-203ENST00000422875 PLAC4Q8WY50 150 aa9.44□□□□□ -0.9
TRAPPC10-203ENST00000422875 C10orf95Q9H7T3 257 aa9.44□□□□□ -0.9
TRAPPC10-203ENST00000422875 H0YAA0 97 aa9.42□□□□□ -0.9
TRAPPC10-203ENST00000422875 SPENQ96T58 3664 aaKnown RBP9.35□□□□□ -0.91
TRAPPC10-203ENST00000422875 XP32Q5T750 250 aa9.2□□□□□ -0.94
TRAPPC10-203ENST00000422875 OTOGQ6ZRI0 2925 aa9.19□□□□□ -0.94
TRAPPC10-203ENST00000422875 FBN3Q75N90 2809 aa9.17□□□□□ -0.94
TRAPPC10-203ENST00000422875 TNP1P09430 55 aa9.17□□□□□ -0.94
TRAPPC10-203ENST00000422875 KRTAP13-3Q3SY46 172 aa9.16□□□□□ -0.94
TRAPPC10-203ENST00000422875 P0C880 135 aa9.13□□□□□ -0.95
TRAPPC10-203ENST00000422875 ZFHX3Q15911 3703 aa9.12□□□□□ -0.95
TRAPPC10-203ENST00000422875 CSMD2Q7Z408 3487 aa9.12□□□□□ -0.95
TRAPPC10-203ENST00000422875 KRTAP10-8P60410 259 aa9.03□□□□□ -0.96
TRAPPC10-203ENST00000422875 NBPF19A0A087WUL8 3843 aa9.03□□□□□ -0.96
TRAPPC10-203ENST00000422875 COL7A1Q02388 2944 aa9.02□□□□□ -0.97
TRAPPC10-203ENST00000422875 MEGF8Q7Z7M0 2845 aa8.99□□□□□ -0.97
TRAPPC10-203ENST00000422875 A0A1B0GVY2 172 aa8.96□□□□□ -0.98
TRAPPC10-203ENST00000422875 PP632Q6XCG6 107 aa8.96□□□□□ -0.98
TRAPPC10-203ENST00000422875 TPRXLQ17RH7 258 aa8.82□□□□□ -1
TRAPPC10-203ENST00000422875 KRTAP12-2P59991 146 aa8.79□□□□□ -1
TRAPPC10-203ENST00000422875 KRTAP21-3Q3LHN1 58 aa8.75□□□□□ -1.01
TRAPPC10-203ENST00000422875 KRTAP3-1Q9BYR8 98 aa8.74□□□□□ -1.01
TRAPPC10-203ENST00000422875 TRRAPQ9Y4A5 3859 aa8.74□□□□□ -1.01
TRAPPC10-203ENST00000422875 BSNQ9UPA5 3926 aa8.65□□□□□ -1.02
TRAPPC10-203ENST00000422875 KRTAP12-1P59990 96 aa8.63□□□□□ -1.03
TRAPPC10-203ENST00000422875 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
TRAPPC10-203ENST00000422875 KRTAP13-4Q3LI77 160 aa8.55□□□□□ -1.04
TRAPPC10-203ENST00000422875 VPS13CQ709C8 3753 aa8.54□□□□□ -1.04
TRAPPC10-203ENST00000422875 KRTAP10-6P60371 365 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC10-203ENST00000422875 ANK3Q12955 4377 aaKnown RBP8.4□□□□□ -1.06
TRAPPC10-203ENST00000422875 CSMD3Q7Z407 3707 aa8.34□□□□□ -1.07
TRAPPC10-203ENST00000422875 PRO2289Q9P1D8 64 aa8.29□□□□□ -1.08
TRAPPC10-203ENST00000422875 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
TRAPPC10-203ENST00000422875 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
TRAPPC10-203ENST00000422875 ZNF469Q96JG9 3925 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC10-203ENST00000422875 KRTAP15-1Q3LI76 137 aa8.1□□□□□ -1.11
TRAPPC10-203ENST00000422875 MT1HL1P0DM35 61 aa8□□□□□ -1.13
TRAPPC10-203ENST00000422875 AKAP9Q99996 3911 aa7.92□□□□□ -1.14
TRAPPC10-203ENST00000422875 HUWE1Q7Z6Z7 4374 aaKnown RBP7.91□□□□□ -1.14
TRAPPC10-203ENST00000422875 KRTAP10-4P60372 401 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC10-203ENST00000422875 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC10-203ENST00000422875 KRTAP4-5Q9BYR2 181 aa7.7□□□□□ -1.18
TRAPPC10-203ENST00000422875 DNAH5Q8TE73 4624 aa7.63□□□□□ -1.19
TRAPPC10-203ENST00000422875 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms