RNA–Protein interactions for RNA: ENST00000422611.6

SLC12A4-202, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 4,670 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-202ENST00000422611 A0A087X002 238 aa11.48□□□□□ -0.57
SLC12A4-202ENST00000422611 NOTCH2NLQ7Z3S9 236 aa11.48□□□□□ -0.57
SLC12A4-202ENST00000422611 PLAC8Q9NZF1 115 aa11.47□□□□□ -0.57
SLC12A4-202ENST00000422611 SPINT4Q6UDR6 99 aa11.45□□□□□ -0.58
SLC12A4-202ENST00000422611 Q6ZR54 194 aa11.43□□□□□ -0.58
SLC12A4-202ENST00000422611 DMBT1Q9UGM3 2413 aaPredicted RBP11.41□□□□□ -0.58
SLC12A4-202ENST00000422611 LINC01554Q52M75 96 aa11.38□□□□□ -0.59
SLC12A4-202ENST00000422611 TENM3Q9P273 2699 aa11.38□□□□□ -0.59
SLC12A4-202ENST00000422611 A0A0D9SG42 100 aa11.36□□□□□ -0.59
SLC12A4-202ENST00000422611 LINC00483Q53H64 154 aa11.35□□□□□ -0.59
SLC12A4-202ENST00000422611 CSAG1Q6PB30 78 aa11.31□□□□□ -0.6
SLC12A4-202ENST00000422611 DMAC1Q96GE9 116 aa11.3□□□□□ -0.6
SLC12A4-202ENST00000422611 A0A1B0GU33 70 aa11.3□□□□□ -0.6
SLC12A4-202ENST00000422611 VWFP04275 2813 aa11.28□□□□□ -0.6
SLC12A4-202ENST00000422611 TENM1Q9UKZ4 2725 aa11.27□□□□□ -0.61
SLC12A4-202ENST00000422611 A6NN06 94 aa11.23□□□□□ -0.61
SLC12A4-202ENST00000422611 CRIPTQ9P021 101 aa11.19□□□□□ -0.62
SLC12A4-202ENST00000422611 PDZD2O15018 2839 aa11.19□□□□□ -0.62
SLC12A4-202ENST00000422611 KRTAP10-2P60368 255 aa11.19□□□□□ -0.62
SLC12A4-202ENST00000422611 TENM4Q6N022 2769 aa11.16□□□□□ -0.62
SLC12A4-202ENST00000422611 KRTAP13-1Q8IUC0 172 aa11.15□□□□□ -0.62
SLC12A4-202ENST00000422611 Q6ZRN7 208 aaPredicted RBP11.13□□□□□ -0.63
SLC12A4-202ENST00000422611 ADM2Q7Z4H4 148 aa11.12□□□□□ -0.63
SLC12A4-202ENST00000422611 KRTAP10-1P60331 282 aa11.11□□□□□ -0.63
SLC12A4-202ENST00000422611 FLG2Q5D862 2391 aaPredicted RBP11.1□□□□□ -0.63
SLC12A4-202ENST00000422611 FBN1P35555 2871 aaKnown RBP11.1□□□□□ -0.63
SLC12A4-202ENST00000422611 H3BS24 57 aa11.1□□□□□ -0.63
SLC12A4-202ENST00000422611 CSMD2Q7Z408 3487 aa11.1□□□□□ -0.63
SLC12A4-202ENST00000422611 BSNQ9UPA5 3926 aa11.07□□□□□ -0.64
SLC12A4-202ENST00000422611 SPATA8Q6RVD6 105 aa11.04□□□□□ -0.64
SLC12A4-202ENST00000422611 PKD1L1Q8TDX9 2849 aa11.01□□□□□ -0.65
SLC12A4-202ENST00000422611 NBPF19A0A087WUL8 3843 aa10.98□□□□□ -0.65
SLC12A4-202ENST00000422611 KRTAP13-2Q52LG2 175 aa10.92□□□□□ -0.66
SLC12A4-202ENST00000422611 OTOGQ6ZRI0 2925 aa10.9□□□□□ -0.66
SLC12A4-202ENST00000422611 H1FX-AS1Q4G0G2 97 aa10.89□□□□□ -0.67
SLC12A4-202ENST00000422611 ASB16-AS1Q495Z4 193 aa10.88□□□□□ -0.67
SLC12A4-202ENST00000422611 TGP01266 2768 aa10.82□□□□□ -0.68
SLC12A4-202ENST00000422611 RPL37P61927 97 aaKnown RBP10.78□□□□□ -0.68
SLC12A4-202ENST00000422611 S4R3F8 94 aa10.77□□□□□ -0.68
SLC12A4-202ENST00000422611 TENM2Q9NT68 2774 aa10.77□□□□□ -0.69
SLC12A4-202ENST00000422611 ZFHX3Q15911 3703 aa10.76□□□□□ -0.69
SLC12A4-202ENST00000422611 ROMO1P60602 79 aa10.74□□□□□ -0.69
SLC12A4-202ENST00000422611 VPS13CQ709C8 3753 aa10.72□□□□□ -0.69
SLC12A4-202ENST00000422611 COX6B2Q6YFQ2 88 aa10.72□□□□□ -0.69
SLC12A4-202ENST00000422611 Q6ZSA8 131 aa10.71□□□□□ -0.69
SLC12A4-202ENST00000422611 SRRM2Q9UQ35 2752 aaKnown RBP10.69□□□□□ -0.7
SLC12A4-202ENST00000422611 KRTAP25-1Q3LHN0 102 aa10.65□□□□□ -0.7
SLC12A4-202ENST00000422611 TRRAPQ9Y4A5 3859 aa10.65□□□□□ -0.7
SLC12A4-202ENST00000422611 J3QL48 77 aa10.61□□□□□ -0.71
SLC12A4-202ENST00000422611 CAMK2N1Q7Z7J9 78 aa10.5□□□□□ -0.73
SLC12A4-202ENST00000422611 R4GN34 69 aa10.49□□□□□ -0.73
SLC12A4-202ENST00000422611 KRTAP1-4P0C5Y4 121 aa10.48□□□□□ -0.73
SLC12A4-202ENST00000422611 Q5VSD8 79 aa10.48□□□□□ -0.73
SLC12A4-202ENST00000422611 LUZP6Q538Z0 58 aa10.46□□□□□ -0.73
SLC12A4-202ENST00000422611 RPS29P62273 56 aaKnown RBP10.46□□□□□ -0.74
SLC12A4-202ENST00000422611 ANK3Q12955 4377 aaKnown RBP10.45□□□□□ -0.74
SLC12A4-202ENST00000422611 KRTAP16-1A8MUX0 517 aa10.43□□□□□ -0.74
SLC12A4-202ENST00000422611 KRTAP13-3Q3SY46 172 aa10.42□□□□□ -0.74
SLC12A4-202ENST00000422611 FBN3Q75N90 2809 aa10.42□□□□□ -0.74
SLC12A4-202ENST00000422611 H0YAA0 97 aa10.4□□□□□ -0.74
SLC12A4-202ENST00000422611 M0QZ58 72 aa10.4□□□□□ -0.74
SLC12A4-202ENST00000422611 A8MUU9 505 aa10.38□□□□□ -0.75
SLC12A4-202ENST00000422611 C20orf166-AS1Q96NR2 134 aa10.34□□□□□ -0.75
SLC12A4-202ENST00000422611 ZNF469Q96JG9 3925 aaPredicted RBP10.25□□□□□ -0.77
SLC12A4-202ENST00000422611 NDUFAF8A1L188 74 aa10.25□□□□□ -0.77
SLC12A4-202ENST00000422611 C10orf95Q9H7T3 257 aa10.21□□□□□ -0.77
SLC12A4-202ENST00000422611 COL7A1Q02388 2944 aa10.16□□□□□ -0.78
SLC12A4-202ENST00000422611 MEGF8Q7Z7M0 2845 aa10.15□□□□□ -0.78
SLC12A4-202ENST00000422611 CSMD3Q7Z407 3707 aa10.14□□□□□ -0.79
SLC12A4-202ENST00000422611 SEC61BP60468 96 aaKnown RBP10.11□□□□□ -0.79
SLC12A4-202ENST00000422611 AKAP9Q99996 3911 aa10.02□□□□□ -0.81
SLC12A4-202ENST00000422611 A0A0A0MQY5 61 aa10.02□□□□□ -0.81
SLC12A4-202ENST00000422611 M0R2T5 61 aa9.99□□□□□ -0.81
SLC12A4-202ENST00000422611 XP32Q5T750 250 aa9.97□□□□□ -0.81
SLC12A4-202ENST00000422611 P0C880 135 aa9.96□□□□□ -0.82
SLC12A4-202ENST00000422611 KRTAP3-1Q9BYR8 98 aa9.86□□□□□ -0.83
SLC12A4-202ENST00000422611 HUWE1Q7Z6Z7 4374 aaKnown RBP9.73□□□□□ -0.85
SLC12A4-202ENST00000422611 PLAC4Q8WY50 150 aa9.69□□□□□ -0.86
SLC12A4-202ENST00000422611 KRTAP12-2P59991 146 aa9.67□□□□□ -0.86
SLC12A4-202ENST00000422611 TPRXLQ17RH7 258 aa9.64□□□□□ -0.87
SLC12A4-202ENST00000422611 KRTAP10-8P60410 259 aa9.6□□□□□ -0.87
SLC12A4-202ENST00000422611 KRTAP13-4Q3LI77 160 aa9.59□□□□□ -0.87
SLC12A4-202ENST00000422611 TNP1P09430 55 aa9.52□□□□□ -0.88
SLC12A4-202ENST00000422611 KRTAP10-6P60371 365 aaPredicted RBP9.52□□□□□ -0.89
SLC12A4-202ENST00000422611 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
SLC12A4-202ENST00000422611 DNAH10Q8IVF4 4471 aa9.49□□□□□ -0.89
SLC12A4-202ENST00000422611 KRTAP12-1P59990 96 aa9.48□□□□□ -0.89
SLC12A4-202ENST00000422611 KRTAP21-3Q3LHN1 58 aa9.4□□□□□ -0.9
SLC12A4-202ENST00000422611 PP632Q6XCG6 107 aa9.4□□□□□ -0.9
SLC12A4-202ENST00000422611 PLECQ15149 4684 aaKnown RBP9.31□□□□□ -0.92
SLC12A4-202ENST00000422611 DNAH9Q9NYC9 4486 aa9.28□□□□□ -0.92
SLC12A4-202ENST00000422611 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
SLC12A4-202ENST00000422611 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
SLC12A4-202ENST00000422611 DNAH1Q9P2D7 4330 aa9.22□□□□□ -0.93
SLC12A4-202ENST00000422611 DNAH11Q96DT5 4516 aa9.19□□□□□ -0.94
SLC12A4-202ENST00000422611 KRTAP10-4P60372 401 aaPredicted RBP9.07□□□□□ -0.96
SLC12A4-202ENST00000422611 KRTAP15-1Q3LI76 137 aa9.06□□□□□ -0.96
SLC12A4-202ENST00000422611 DNAH5Q8TE73 4624 aa9.02□□□□□ -0.97
SLC12A4-202ENST00000422611 DNAH8Q96JB1 4490 aa8.99□□□□□ -0.97
SLC12A4-202ENST00000422611 STARD9Q9P2P6 4700 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms