RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 Q1T7F1 81 aa15.15■□□□□ 0.02
ITGA9-203ENST00000422441 NDUFS5O43920 106 aa15.14■□□□□ 0.01
ITGA9-203ENST00000422441 CD164Q04900 197 aa15.13■□□□□ 0.01
ITGA9-203ENST00000422441 SSBP3-AS1Q7Z2R9 100 aa15.13■□□□□ 0.01
ITGA9-203ENST00000422441 SPINK6Q6UWN8 80 aa15.12■□□□□ 0.01
ITGA9-203ENST00000422441 PRO0628Q9UI54 55 aa15.09■□□□□ 0.01
ITGA9-203ENST00000422441 Q6ZSA8 131 aa15.08■□□□□ 0
ITGA9-203ENST00000422441 IGLV7-46A0A075B6I9 117 aa15.08■□□□□ 0
ITGA9-203ENST00000422441 KRTAP10-1P60331 282 aa15.07■□□□□ 0
ITGA9-203ENST00000422441 PKD1P98161 4303 aa15.07■□□□□ 0
ITGA9-203ENST00000422441 PCOTHQ58A44 107 aa15.06■□□□□ 0
ITGA9-203ENST00000422441 HYDINQ4G0P3 5121 aa15.03■□□□□ -0
ITGA9-203ENST00000422441 FAT2Q9NYQ8 4349 aa15.02■□□□□ -0
ITGA9-203ENST00000422441 LRP1BQ9NZR2 4599 aa15.02■□□□□ -0
ITGA9-203ENST00000422441 BRK1Q8WUW1 75 aa15□□□□□ -0.01
ITGA9-203ENST00000422441 KRTAP13-2Q52LG2 175 aa14.99□□□□□ -0.01
ITGA9-203ENST00000422441 PSPHP1O15172 72 aa14.94□□□□□ -0.02
ITGA9-203ENST00000422441 COA5Q86WW8 74 aa14.92□□□□□ -0.02
ITGA9-203ENST00000422441 V9GYY9 64 aa14.92□□□□□ -0.02
ITGA9-203ENST00000422441 C8orf87E5RJ46 101 aa14.92□□□□□ -0.02
ITGA9-203ENST00000422441 Q5W150 140 aa14.92□□□□□ -0.02
ITGA9-203ENST00000422441 KRTAP13-3Q3SY46 172 aa14.9□□□□□ -0.02
ITGA9-203ENST00000422441 Q8N9P0 234 aaPredicted RBP14.88□□□□□ -0.03
ITGA9-203ENST00000422441 LOC101927531A0A1B0GV80 90 aa14.86□□□□□ -0.03
ITGA9-203ENST00000422441 KRTAP1-4P0C5Y4 121 aa14.86□□□□□ -0.03
ITGA9-203ENST00000422441 C1orf195Q5TG92 126 aa14.86□□□□□ -0.03
ITGA9-203ENST00000422441 A8MUN3 132 aa14.85□□□□□ -0.03
ITGA9-203ENST00000422441 LINC00313P59037 77 aa14.82□□□□□ -0.04
ITGA9-203ENST00000422441 VPS13BQ7Z7G8 4022 aa14.82□□□□□ -0.04
ITGA9-203ENST00000422441 KRTAP21-3Q3LHN1 58 aa14.81□□□□□ -0.04
ITGA9-203ENST00000422441 LIMD2Q9BT23 127 aa14.79□□□□□ -0.04
ITGA9-203ENST00000422441 Q5VV11 94 aa14.76□□□□□ -0.05
ITGA9-203ENST00000422441 HRES1P13985 223 aa14.74□□□□□ -0.05
ITGA9-203ENST00000422441 PLA2G1BP04054 148 aaKnown RBP14.68□□□□□ -0.06
ITGA9-203ENST00000422441 PRR15LQ9BU68 103 aa14.68□□□□□ -0.06
ITGA9-203ENST00000422441 KRTAP16-1A8MUX0 517 aa14.67□□□□□ -0.06
ITGA9-203ENST00000422441 FAM229AH3BQW9 127 aa14.67□□□□□ -0.06
ITGA9-203ENST00000422441 TYMSOSQ8TAI1 123 aa14.63□□□□□ -0.07
ITGA9-203ENST00000422441 RETNLBQ9BQ08 111 aa14.63□□□□□ -0.07
ITGA9-203ENST00000422441 C4orf48Q5BLP8 95 aa14.61□□□□□ -0.07
ITGA9-203ENST00000422441 SACSQ9NZJ4 4579 aa14.61□□□□□ -0.07
ITGA9-203ENST00000422441 CHKB-CPT1BH3BT56 60 aa14.6□□□□□ -0.07
ITGA9-203ENST00000422441 SPAG11AQ6PDA7 123 aa14.59□□□□□ -0.07
ITGA9-203ENST00000422441 PKHD1P08F94 4074 aa14.59□□□□□ -0.07
ITGA9-203ENST00000422441 LINC01558Q9Y6Z2 57 aa14.58□□□□□ -0.08
ITGA9-203ENST00000422441 SPINK1P00995 79 aa14.56□□□□□ -0.08
ITGA9-203ENST00000422441 IGKV2-30P06310 120 aa14.56□□□□□ -0.08
ITGA9-203ENST00000422441 Q75L30 129 aa14.56□□□□□ -0.08
ITGA9-203ENST00000422441 ACYP2P14621 99 aa14.52□□□□□ -0.09
ITGA9-203ENST00000422441 A8MU10 97 aa14.49□□□□□ -0.09
ITGA9-203ENST00000422441 DMAC1Q96GE9 116 aa14.49□□□□□ -0.09
ITGA9-203ENST00000422441 PRR26Q8N8Z3 221 aa14.48□□□□□ -0.09
ITGA9-203ENST00000422441 DYNC1H1Q14204 4646 aaKnown RBP14.47□□□□□ -0.09
ITGA9-203ENST00000422441 LINC00304Q8N9R0 145 aa14.43□□□□□ -0.1
ITGA9-203ENST00000422441 SMR3BP02814 79 aaPredicted RBP14.41□□□□□ -0.1
ITGA9-203ENST00000422441 A6NED7 52 aa14.4□□□□□ -0.1
ITGA9-203ENST00000422441 RPS29P62273 56 aaKnown RBP14.39□□□□□ -0.11
ITGA9-203ENST00000422441 LCA10Q71F78 164 aa14.37□□□□□ -0.11
ITGA9-203ENST00000422441 IGKV2D-30A0A075B6S6 120 aa14.36□□□□□ -0.11
ITGA9-203ENST00000422441 A0A1B0GVY2 172 aa14.35□□□□□ -0.11
ITGA9-203ENST00000422441 APOBP04114 4563 aaKnown RBP14.29□□□□□ -0.12
ITGA9-203ENST00000422441 FAT1Q14517 4588 aa14.27□□□□□ -0.12
ITGA9-203ENST00000422441 KRTAP10-4P60372 401 aaPredicted RBP14.27□□□□□ -0.13
ITGA9-203ENST00000422441 CDC42SE1Q9NRR8 79 aa14.26□□□□□ -0.13
ITGA9-203ENST00000422441 SPINK7P58062 85 aa14.25□□□□□ -0.13
ITGA9-203ENST00000422441 PKHD1L1Q86WI1 4243 aa14.24□□□□□ -0.13
ITGA9-203ENST00000422441 ATP11AUNQ6ZP68 121 aa14.18□□□□□ -0.14
ITGA9-203ENST00000422441 PMAIP1Q13794 54 aa14.17□□□□□ -0.14
ITGA9-203ENST00000422441 C7orf65Q6ZTY9 151 aa14.17□□□□□ -0.14
ITGA9-203ENST00000422441 SPTSSBQ8NFR3 76 aa14.17□□□□□ -0.14
ITGA9-203ENST00000422441 RYR2Q92736 4967 aa14.14□□□□□ -0.15
ITGA9-203ENST00000422441 C9orf92A6NGG3 77 aa14.08□□□□□ -0.15
ITGA9-203ENST00000422441 A0A1B0GU69 56 aa14.06□□□□□ -0.16
ITGA9-203ENST00000422441 A8MUU9 505 aa14.06□□□□□ -0.16
ITGA9-203ENST00000422441 C20orf166-AS1Q96NR2 134 aa14.06□□□□□ -0.16
ITGA9-203ENST00000422441 Q8N1X5 172 aa14.01□□□□□ -0.17
ITGA9-203ENST00000422441 A6NN06 94 aa13.97□□□□□ -0.17
ITGA9-203ENST00000422441 KMT2CQ8NEZ4 4911 aaKnown RBP13.95□□□□□ -0.18
ITGA9-203ENST00000422441 FLG2Q5D862 2391 aaPredicted RBP13.86□□□□□ -0.19
ITGA9-203ENST00000422441 KTN1-AS1Q86SY8 53 aa13.83□□□□□ -0.2
ITGA9-203ENST00000422441 SPATA8Q6RVD6 105 aa13.81□□□□□ -0.2
ITGA9-203ENST00000422441 KRTAP3-1Q9BYR8 98 aa13.79□□□□□ -0.2
ITGA9-203ENST00000422441 UQCR11O14957 56 aa13.78□□□□□ -0.2
ITGA9-203ENST00000422441 FAT3Q8TDW7 4589 aa13.76□□□□□ -0.21
ITGA9-203ENST00000422441 TNXBP22105 4242 aa13.76□□□□□ -0.21
ITGA9-203ENST00000422441 MIR22HGQ0VDD5 57 aa13.74□□□□□ -0.21
ITGA9-203ENST00000422441 LRP1Q07954 4544 aaKnown RBP13.73□□□□□ -0.21
ITGA9-203ENST00000422441 KRTAP10-8P60410 259 aa13.73□□□□□ -0.21
ITGA9-203ENST00000422441 HSPG2P98160 4391 aa13.68□□□□□ -0.22
ITGA9-203ENST00000422441 Q5VSD8 79 aa13.66□□□□□ -0.22
ITGA9-203ENST00000422441 SEC61GP60059 68 aa13.65□□□□□ -0.22
ITGA9-203ENST00000422441 COX6B2Q6YFQ2 88 aa13.56□□□□□ -0.24
ITGA9-203ENST00000422441 RYR1P21817 5038 aa13.54□□□□□ -0.24
ITGA9-203ENST00000422441 RYR3Q15413 4870 aa13.54□□□□□ -0.24
ITGA9-203ENST00000422441 KRTAP17-1Q9BYP8 105 aa13.49□□□□□ -0.25
ITGA9-203ENST00000422441 DMBT1Q9UGM3 2413 aaPredicted RBP13.45□□□□□ -0.26
ITGA9-203ENST00000422441 RPL37P61927 97 aaKnown RBP13.45□□□□□ -0.26
ITGA9-203ENST00000422441 RBM12B-AS1Q9P1G2 102 aa13.42□□□□□ -0.26
ITGA9-203ENST00000422441 XP32Q5T750 250 aa13.4□□□□□ -0.26
ITGA9-203ENST00000422441 H0YAA0 97 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms