RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 LINC00483Q53H64 154 aa8.19□□□□□ -1.1
CTCFL-203ENST00000422109 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
CTCFL-203ENST00000422109 A0A1B0GVX0 72 aa8.18□□□□□ -1.1
CTCFL-203ENST00000422109 DNAH17Q9UFH2 4485 aa8.18□□□□□ -1.1
CTCFL-203ENST00000422109 DNHD1Q96M86 4753 aa8.17□□□□□ -1.1
CTCFL-203ENST00000422109 KRTAP10-2P60368 255 aa8.16□□□□□ -1.1
CTCFL-203ENST00000422109 IGLV7-43P04211 117 aa8.15□□□□□ -1.1
CTCFL-203ENST00000422109 DNAH6Q9C0G6 4158 aa8.15□□□□□ -1.1
CTCFL-203ENST00000422109 Q1T7F1 81 aa8.15□□□□□ -1.11
CTCFL-203ENST00000422109 RETNLBQ9BQ08 111 aa8.15□□□□□ -1.11
CTCFL-203ENST00000422109 A8MU10 97 aa8.14□□□□□ -1.11
CTCFL-203ENST00000422109 H3BPC8 53 aa8.14□□□□□ -1.11
CTCFL-203ENST00000422109 MRPL34Q9BQ48 92 aaKnown RBP8.13□□□□□ -1.11
CTCFL-203ENST00000422109 COA5Q86WW8 74 aa8.12□□□□□ -1.11
CTCFL-203ENST00000422109 SPANXA2-OT1Q8N9U9 137 aa8.11□□□□□ -1.11
CTCFL-203ENST00000422109 PRR15LQ9BU68 103 aa8.1□□□□□ -1.11
CTCFL-203ENST00000422109 TP53AIP1Q9HCN2 124 aa8.09□□□□□ -1.11
CTCFL-203ENST00000422109 SPTSSBQ8NFR3 76 aa8.08□□□□□ -1.12
CTCFL-203ENST00000422109 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
CTCFL-203ENST00000422109 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
CTCFL-203ENST00000422109 Q5W150 140 aa8.07□□□□□ -1.12
CTCFL-203ENST00000422109 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
CTCFL-203ENST00000422109 CHKB-CPT1BH3BT56 60 aa8.07□□□□□ -1.12
CTCFL-203ENST00000422109 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
CTCFL-203ENST00000422109 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
CTCFL-203ENST00000422109 Q5VV11 94 aa8.04□□□□□ -1.12
CTCFL-203ENST00000422109 KTN1-AS1Q86SY8 53 aa8.04□□□□□ -1.12
CTCFL-203ENST00000422109 KRTAP10-1P60331 282 aa8.02□□□□□ -1.13
CTCFL-203ENST00000422109 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
CTCFL-203ENST00000422109 C8orf87E5RJ46 101 aa8.01□□□□□ -1.13
CTCFL-203ENST00000422109 DNAH5Q8TE73 4624 aa8□□□□□ -1.13
CTCFL-203ENST00000422109 HRES1P13985 223 aa7.98□□□□□ -1.13
CTCFL-203ENST00000422109 KRTAP13-2Q52LG2 175 aa7.98□□□□□ -1.13
CTCFL-203ENST00000422109 HYDINQ4G0P3 5121 aa7.98□□□□□ -1.13
CTCFL-203ENST00000422109 LRP1BQ9NZR2 4599 aa7.97□□□□□ -1.13
CTCFL-203ENST00000422109 LIMD2Q9BT23 127 aa7.97□□□□□ -1.13
CTCFL-203ENST00000422109 PRR26Q8N8Z3 221 aa7.96□□□□□ -1.13
CTCFL-203ENST00000422109 A6NED7 52 aa7.96□□□□□ -1.14
CTCFL-203ENST00000422109 LINC00313P59037 77 aa7.96□□□□□ -1.14
CTCFL-203ENST00000422109 SSBP3-AS1Q7Z2R9 100 aa7.96□□□□□ -1.14
CTCFL-203ENST00000422109 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
CTCFL-203ENST00000422109 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
CTCFL-203ENST00000422109 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
CTCFL-203ENST00000422109 IGKV2D-30A0A075B6S6 120 aa7.87□□□□□ -1.15
CTCFL-203ENST00000422109 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
CTCFL-203ENST00000422109 LCA10Q71F78 164 aa7.87□□□□□ -1.15
CTCFL-203ENST00000422109 VPS13BQ7Z7G8 4022 aa7.86□□□□□ -1.15
CTCFL-203ENST00000422109 SMR3BP02814 79 aaPredicted RBP7.85□□□□□ -1.15
CTCFL-203ENST00000422109 KRTAP1-4P0C5Y4 121 aa7.84□□□□□ -1.15
CTCFL-203ENST00000422109 SPINK7P58062 85 aa7.84□□□□□ -1.15
CTCFL-203ENST00000422109 Q75L30 129 aa7.84□□□□□ -1.15
CTCFL-203ENST00000422109 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.15
CTCFL-203ENST00000422109 Q6ZSA8 131 aa7.83□□□□□ -1.16
CTCFL-203ENST00000422109 PKD1P98161 4303 aa7.83□□□□□ -1.16
CTCFL-203ENST00000422109 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
CTCFL-203ENST00000422109 FAM229AH3BQW9 127 aa7.82□□□□□ -1.16
CTCFL-203ENST00000422109 ACYP2P14621 99 aa7.81□□□□□ -1.16
CTCFL-203ENST00000422109 FAT2Q9NYQ8 4349 aa7.81□□□□□ -1.16
CTCFL-203ENST00000422109 PKHD1P08F94 4074 aa7.78□□□□□ -1.16
CTCFL-203ENST00000422109 KRTAP16-1A8MUX0 517 aa7.76□□□□□ -1.17
CTCFL-203ENST00000422109 C7orf65Q6ZTY9 151 aa7.76□□□□□ -1.17
CTCFL-203ENST00000422109 PRAC1Q96KF2 57 aa7.75□□□□□ -1.17
CTCFL-203ENST00000422109 A6NN06 94 aa7.74□□□□□ -1.17
CTCFL-203ENST00000422109 ATP11AUNQ6ZP68 121 aa7.74□□□□□ -1.17
CTCFL-203ENST00000422109 SPINK1P00995 79 aa7.73□□□□□ -1.17
CTCFL-203ENST00000422109 DMAC1Q96GE9 116 aa7.73□□□□□ -1.17
CTCFL-203ENST00000422109 CDC42SE1Q9NRR8 79 aa7.72□□□□□ -1.17
CTCFL-203ENST00000422109 C9orf92A6NGG3 77 aa7.71□□□□□ -1.17
CTCFL-203ENST00000422109 Q8N1X5 172 aa7.7□□□□□ -1.18
CTCFL-203ENST00000422109 LINC00304Q8N9R0 145 aa7.68□□□□□ -1.18
CTCFL-203ENST00000422109 A0A1B0GU69 56 aa7.67□□□□□ -1.18
CTCFL-203ENST00000422109 FAT1Q14517 4588 aa7.66□□□□□ -1.18
CTCFL-203ENST00000422109 LINC01554Q52M75 96 aa7.64□□□□□ -1.19
CTCFL-203ENST00000422109 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
CTCFL-203ENST00000422109 SACSQ9NZJ4 4579 aa7.6□□□□□ -1.19
CTCFL-203ENST00000422109 DYNC1H1Q14204 4646 aaKnown RBP7.59□□□□□ -1.19
CTCFL-203ENST00000422109 MIR22HGQ0VDD5 57 aa7.5□□□□□ -1.21
CTCFL-203ENST00000422109 UQCR11O14957 56 aa7.47□□□□□ -1.21
CTCFL-203ENST00000422109 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.22
CTCFL-203ENST00000422109 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
CTCFL-203ENST00000422109 APOBP04114 4563 aaKnown RBP7.44□□□□□ -1.22
CTCFL-203ENST00000422109 A0A1B0GVY2 172 aa7.44□□□□□ -1.22
CTCFL-203ENST00000422109 KRTAP10-4P60372 401 aaPredicted RBP7.42□□□□□ -1.22
CTCFL-203ENST00000422109 SPATA8Q6RVD6 105 aa7.41□□□□□ -1.22
CTCFL-203ENST00000422109 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
CTCFL-203ENST00000422109 KMT2CQ8NEZ4 4911 aaKnown RBP7.4□□□□□ -1.23
CTCFL-203ENST00000422109 LRP1Q07954 4544 aaKnown RBP7.39□□□□□ -1.23
CTCFL-203ENST00000422109 A8MUU9 505 aa7.39□□□□□ -1.23
CTCFL-203ENST00000422109 A0A0A0MQY5 61 aa7.38□□□□□ -1.23
CTCFL-203ENST00000422109 C20orf166-AS1Q96NR2 134 aa7.38□□□□□ -1.23
CTCFL-203ENST00000422109 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
CTCFL-203ENST00000422109 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
CTCFL-203ENST00000422109 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
CTCFL-203ENST00000422109 RYR2Q92736 4967 aa7.32□□□□□ -1.24
CTCFL-203ENST00000422109 MYCBP2O75592 4640 aa7.3□□□□□ -1.24
CTCFL-203ENST00000422109 KRTAP21-3Q3LHN1 58 aa7.29□□□□□ -1.24
CTCFL-203ENST00000422109 H0YAA0 97 aa7.26□□□□□ -1.25
CTCFL-203ENST00000422109 Q5VSD8 79 aa7.26□□□□□ -1.25
CTCFL-203ENST00000422109 A0A1B0GU33 70 aa7.24□□□□□ -1.25
CTCFL-203ENST00000422109 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms