RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CDK2AP2O75956 126 aa6.55□□□□□ -1.36
DDX56-203ENST00000421223 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
DDX56-203ENST00000421223 MP68P56378 58 aa6.54□□□□□ -1.36
DDX56-203ENST00000421223 LCA10Q71F78 164 aa6.54□□□□□ -1.36
DDX56-203ENST00000421223 DNAH8Q96JB1 4490 aa6.54□□□□□ -1.36
DDX56-203ENST00000421223 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
DDX56-203ENST00000421223 HYDINQ4G0P3 5121 aa6.52□□□□□ -1.37
DDX56-203ENST00000421223 hDV103S1A0JD37 113 aa6.52□□□□□ -1.37
DDX56-203ENST00000421223 KRTAP29-1A8MX34 341 aaPredicted RBP6.51□□□□□ -1.37
DDX56-203ENST00000421223 H0Y9P7 68 aa6.51□□□□□ -1.37
DDX56-203ENST00000421223 LINC00313P59037 77 aa6.5□□□□□ -1.37
DDX56-203ENST00000421223 Q96NJ1 140 aa6.5□□□□□ -1.37
DDX56-203ENST00000421223 MMP24-AS1A0A0U1RRL7 71 aa6.49□□□□□ -1.37
DDX56-203ENST00000421223 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
DDX56-203ENST00000421223 A0A087X002 238 aa6.48□□□□□ -1.37
DDX56-203ENST00000421223 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
DDX56-203ENST00000421223 C8orf17Q9NRJ1 99 aa6.47□□□□□ -1.37
DDX56-203ENST00000421223 C1orf64Q8NEQ6 169 aa6.46□□□□□ -1.38
DDX56-203ENST00000421223 DNAH5Q8TE73 4624 aa6.46□□□□□ -1.38
DDX56-203ENST00000421223 TRAV22A0A0B4J277 110 aa6.46□□□□□ -1.38
DDX56-203ENST00000421223 PCOTHQ58A44 107 aa6.45□□□□□ -1.38
DDX56-203ENST00000421223 A0A1B0GVX0 72 aa6.45□□□□□ -1.38
DDX56-203ENST00000421223 LRP1BQ9NZR2 4599 aa6.44□□□□□ -1.38
DDX56-203ENST00000421223 Q1T7F1 81 aa6.44□□□□□ -1.38
DDX56-203ENST00000421223 CYP4F30PQ9H0H9 118 aa6.44□□□□□ -1.38
DDX56-203ENST00000421223 SMR3BP02814 79 aaPredicted RBP6.44□□□□□ -1.38
DDX56-203ENST00000421223 A6NN06 94 aa6.43□□□□□ -1.38
DDX56-203ENST00000421223 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
DDX56-203ENST00000421223 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
DDX56-203ENST00000421223 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
DDX56-203ENST00000421223 RETNLBQ9BQ08 111 aa6.41□□□□□ -1.38
DDX56-203ENST00000421223 H3BPC8 53 aa6.4□□□□□ -1.39
DDX56-203ENST00000421223 KRTAP13-2Q52LG2 175 aa6.4□□□□□ -1.39
DDX56-203ENST00000421223 SSBP3-AS1Q7Z2R9 100 aa6.4□□□□□ -1.39
DDX56-203ENST00000421223 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
DDX56-203ENST00000421223 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
DDX56-203ENST00000421223 ATP11AUNQ6ZP68 121 aa6.39□□□□□ -1.39
DDX56-203ENST00000421223 Q6ZSA8 131 aa6.39□□□□□ -1.39
DDX56-203ENST00000421223 ASB16-AS1Q495Z4 193 aa6.37□□□□□ -1.39
DDX56-203ENST00000421223 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
DDX56-203ENST00000421223 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
DDX56-203ENST00000421223 ALMS1Q8TCU4 4167 aa6.37□□□□□ -1.39
DDX56-203ENST00000421223 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
DDX56-203ENST00000421223 FAT2Q9NYQ8 4349 aa6.35□□□□□ -1.39
DDX56-203ENST00000421223 Q5VV11 94 aa6.35□□□□□ -1.39
DDX56-203ENST00000421223 TP53AIP1Q9HCN2 124 aa6.35□□□□□ -1.39
DDX56-203ENST00000421223 PKD1P98161 4303 aa6.35□□□□□ -1.39
DDX56-203ENST00000421223 PKHD1P08F94 4074 aa6.34□□□□□ -1.39
DDX56-203ENST00000421223 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
DDX56-203ENST00000421223 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
DDX56-203ENST00000421223 A6NED7 52 aa6.33□□□□□ -1.4
DDX56-203ENST00000421223 Q5W150 140 aa6.32□□□□□ -1.4
DDX56-203ENST00000421223 KRTAP1-4P0C5Y4 121 aa6.31□□□□□ -1.4
DDX56-203ENST00000421223 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
DDX56-203ENST00000421223 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
DDX56-203ENST00000421223 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
DDX56-203ENST00000421223 IGLV7-46A0A075B6I9 117 aa6.27□□□□□ -1.41
DDX56-203ENST00000421223 LIMD2Q9BT23 127 aa6.25□□□□□ -1.41
DDX56-203ENST00000421223 FAT1Q14517 4588 aa6.25□□□□□ -1.41
DDX56-203ENST00000421223 Q8N9P0 234 aaPredicted RBP6.25□□□□□ -1.41
DDX56-203ENST00000421223 COA5Q86WW8 74 aa6.24□□□□□ -1.41
DDX56-203ENST00000421223 DYNC1H1Q14204 4646 aaKnown RBP6.23□□□□□ -1.41
DDX56-203ENST00000421223 LINC00304Q8N9R0 145 aa6.22□□□□□ -1.41
DDX56-203ENST00000421223 IGKV2D-30A0A075B6S6 120 aa6.21□□□□□ -1.42
DDX56-203ENST00000421223 IGKV2-30P06310 120 aa6.21□□□□□ -1.42
DDX56-203ENST00000421223 LOC101927531A0A1B0GV80 90 aa6.2□□□□□ -1.42
DDX56-203ENST00000421223 SPINK1P00995 79 aa6.2□□□□□ -1.42
DDX56-203ENST00000421223 SPAG11AQ6PDA7 123 aa6.19□□□□□ -1.42
DDX56-203ENST00000421223 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
DDX56-203ENST00000421223 KMT2CQ8NEZ4 4911 aaKnown RBP6.19□□□□□ -1.42
DDX56-203ENST00000421223 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
DDX56-203ENST00000421223 KRTAP13-3Q3SY46 172 aa6.18□□□□□ -1.42
DDX56-203ENST00000421223 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
DDX56-203ENST00000421223 HRES1P13985 223 aa6.16□□□□□ -1.42
DDX56-203ENST00000421223 A0A1B0GVY2 172 aa6.16□□□□□ -1.42
DDX56-203ENST00000421223 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
DDX56-203ENST00000421223 DMBT1Q9UGM3 2413 aaPredicted RBP6.14□□□□□ -1.43
DDX56-203ENST00000421223 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
DDX56-203ENST00000421223 Q75L30 129 aa6.12□□□□□ -1.43
DDX56-203ENST00000421223 RYR2Q92736 4967 aa6.11□□□□□ -1.43
DDX56-203ENST00000421223 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
DDX56-203ENST00000421223 APOBP04114 4563 aaKnown RBP6.08□□□□□ -1.44
DDX56-203ENST00000421223 ACYP2P14621 99 aa6.08□□□□□ -1.44
DDX56-203ENST00000421223 SPINK7P58062 85 aa6.06□□□□□ -1.44
DDX56-203ENST00000421223 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
DDX56-203ENST00000421223 CSAG1Q6PB30 78 aa6.05□□□□□ -1.44
DDX56-203ENST00000421223 Q8N1X5 172 aa6.05□□□□□ -1.44
DDX56-203ENST00000421223 LRP1Q07954 4544 aaKnown RBP6.01□□□□□ -1.45
DDX56-203ENST00000421223 Q5VSD8 79 aa6.01□□□□□ -1.45
DDX56-203ENST00000421223 DMAC1Q96GE9 116 aa6.01□□□□□ -1.45
DDX56-203ENST00000421223 J3QL48 77 aa5.99□□□□□ -1.45
DDX56-203ENST00000421223 RPS29P62273 56 aaKnown RBP5.98□□□□□ -1.45
DDX56-203ENST00000421223 ROMO1P60602 79 aa5.97□□□□□ -1.45
DDX56-203ENST00000421223 RYR3Q15413 4870 aa5.97□□□□□ -1.45
DDX56-203ENST00000421223 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
DDX56-203ENST00000421223 A0A1B0GU69 56 aa5.92□□□□□ -1.46
DDX56-203ENST00000421223 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
DDX56-203ENST00000421223 A8MUU9 505 aa5.9□□□□□ -1.46
DDX56-203ENST00000421223 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.47
DDX56-203ENST00000421223 MYCBP2O75592 4640 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms