RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 CDK2AP2O75956 126 aa5.22□□□□□ -1.57
LINCMD1-201ENST00000418518 ATP5EP56381 51 aaPredicted RBP5.22□□□□□ -1.57
LINCMD1-201ENST00000418518 RPS29P62273 56 aaKnown RBP5.22□□□□□ -1.57
LINCMD1-201ENST00000418518 LIMD2Q9BT23 127 aa5.22□□□□□ -1.57
LINCMD1-201ENST00000418518 FAM236DA0A1B0GTK5 79 aa5.21□□□□□ -1.58
LINCMD1-201ENST00000418518 C8orf87E5RJ46 101 aa5.21□□□□□ -1.58
LINCMD1-201ENST00000418518 PLA2G1BP04054 148 aaKnown RBP5.21□□□□□ -1.58
LINCMD1-201ENST00000418518 FAM236CP0DP71 79 aa5.21□□□□□ -1.58
LINCMD1-201ENST00000418518 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
LINCMD1-201ENST00000418518 IGHV6-1A0A0B4J1U7 121 aa5.2□□□□□ -1.58
LINCMD1-201ENST00000418518 C1orf195Q5TG92 126 aa5.2□□□□□ -1.58
LINCMD1-201ENST00000418518 TYMSOSQ8TAI1 123 aa5.2□□□□□ -1.58
LINCMD1-201ENST00000418518 TP53AIP1Q9HCN2 124 aa5.2□□□□□ -1.58
LINCMD1-201ENST00000418518 SPINK1P00995 79 aa5.19□□□□□ -1.58
LINCMD1-201ENST00000418518 MRPL34Q9BQ48 92 aaKnown RBP5.19□□□□□ -1.58
LINCMD1-201ENST00000418518 SMR3BP02814 79 aaPredicted RBP5.18□□□□□ -1.58
LINCMD1-201ENST00000418518 MP68P56378 58 aa5.18□□□□□ -1.58
LINCMD1-201ENST00000418518 NOTCH2NLQ7Z3S9 236 aa5.18□□□□□ -1.58
LINCMD1-201ENST00000418518 HSPG2P98160 4391 aa5.18□□□□□ -1.58
LINCMD1-201ENST00000418518 TRAV22A0A0B4J277 110 aa5.17□□□□□ -1.58
LINCMD1-201ENST00000418518 H0Y9P7 68 aa5.17□□□□□ -1.58
LINCMD1-201ENST00000418518 SPAG11AQ6PDA7 123 aa5.17□□□□□ -1.58
LINCMD1-201ENST00000418518 PRR26Q8N8Z3 221 aa5.16□□□□□ -1.58
LINCMD1-201ENST00000418518 LINC00304Q8N9R0 145 aa5.16□□□□□ -1.58
LINCMD1-201ENST00000418518 RYR3Q15413 4870 aa5.15□□□□□ -1.58
LINCMD1-201ENST00000418518 C4orf48Q5BLP8 95 aa5.15□□□□□ -1.59
LINCMD1-201ENST00000418518 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
LINCMD1-201ENST00000418518 LINC00208Q96KT6 92 aa5.14□□□□□ -1.59
LINCMD1-201ENST00000418518 RYR1P21817 5038 aa5.14□□□□□ -1.59
LINCMD1-201ENST00000418518 KRTAP13-3Q3SY46 172 aa5.13□□□□□ -1.59
LINCMD1-201ENST00000418518 KRTAP16-1A8MUX0 517 aa5.12□□□□□ -1.59
LINCMD1-201ENST00000418518 OXTP01178 125 aa5.12□□□□□ -1.59
LINCMD1-201ENST00000418518 LINC00313P59037 77 aa5.12□□□□□ -1.59
LINCMD1-201ENST00000418518 Q8N9P0 234 aaPredicted RBP5.12□□□□□ -1.59
LINCMD1-201ENST00000418518 C1orf64Q8NEQ6 169 aa5.12□□□□□ -1.59
LINCMD1-201ENST00000418518 SPANXA2-OT1Q8N9U9 137 aa5.11□□□□□ -1.59
LINCMD1-201ENST00000418518 CYP4F30PQ9H0H9 118 aa5.11□□□□□ -1.59
LINCMD1-201ENST00000418518 TNXBP22105 4242 aa5.11□□□□□ -1.59
LINCMD1-201ENST00000418518 FAM229AH3BQW9 127 aa5.09□□□□□ -1.59
LINCMD1-201ENST00000418518 NDUFS5O43920 106 aa5.09□□□□□ -1.59
LINCMD1-201ENST00000418518 FLG2Q5D862 2391 aaPredicted RBP5.09□□□□□ -1.59
LINCMD1-201ENST00000418518 FAT3Q8TDW7 4589 aa5.08□□□□□ -1.6
LINCMD1-201ENST00000418518 KRTAP3-3Q9BYR6 98 aa5.08□□□□□ -1.6
LINCMD1-201ENST00000418518 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
LINCMD1-201ENST00000418518 LOC101927531A0A1B0GV80 90 aa5.06□□□□□ -1.6
LINCMD1-201ENST00000418518 Q5VSD8 79 aa5.06□□□□□ -1.6
LINCMD1-201ENST00000418518 Q5W150 140 aa5.06□□□□□ -1.6
LINCMD1-201ENST00000418518 IGLV7-46A0A075B6I9 117 aa5.04□□□□□ -1.6
LINCMD1-201ENST00000418518 KRTAP10-8P60410 259 aa5.04□□□□□ -1.6
LINCMD1-201ENST00000418518 LRP1Q07954 4544 aaKnown RBP5.02□□□□□ -1.61
LINCMD1-201ENST00000418518 SMIM26A0A096LP01 95 aa5.02□□□□□ -1.61
LINCMD1-201ENST00000418518 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
LINCMD1-201ENST00000418518 KIAA1109Q2LD37 5005 aa5□□□□□ -1.61
LINCMD1-201ENST00000418518 IGKV2-30P06310 120 aa5□□□□□ -1.61
LINCMD1-201ENST00000418518 Q8N1X5 172 aa4.99□□□□□ -1.61
LINCMD1-201ENST00000418518 C20orf166-AS1Q96NR2 134 aa4.99□□□□□ -1.61
LINCMD1-201ENST00000418518 A8MUU9 505 aa4.98□□□□□ -1.61
LINCMD1-201ENST00000418518 PCOTHQ58A44 107 aa4.98□□□□□ -1.61
LINCMD1-201ENST00000418518 FP248Q71RG6 208 aaPredicted RBP4.98□□□□□ -1.61
LINCMD1-201ENST00000418518 PRR4Q16378 134 aa4.97□□□□□ -1.61
LINCMD1-201ENST00000418518 EPPK1P58107 5090 aaKnown RBP4.96□□□□□ -1.61
LINCMD1-201ENST00000418518 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
LINCMD1-201ENST00000418518 RETNLBQ9BQ08 111 aa4.93□□□□□ -1.62
LINCMD1-201ENST00000418518 DMBT1Q9UGM3 2413 aaPredicted RBP4.92□□□□□ -1.62
LINCMD1-201ENST00000418518 HRES1P13985 223 aa4.92□□□□□ -1.62
LINCMD1-201ENST00000418518 COA5Q86WW8 74 aa4.92□□□□□ -1.62
LINCMD1-201ENST00000418518 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
LINCMD1-201ENST00000418518 C9orf92A6NGG3 77 aa4.91□□□□□ -1.62
LINCMD1-201ENST00000418518 Q1T7F1 81 aa4.91□□□□□ -1.62
LINCMD1-201ENST00000418518 Q75L30 129 aa4.91□□□□□ -1.62
LINCMD1-201ENST00000418518 C7orf65Q6ZTY9 151 aa4.9□□□□□ -1.63
LINCMD1-201ENST00000418518 C4orf26Q17RF5 130 aa4.89□□□□□ -1.63
LINCMD1-201ENST00000418518 IGKV2D-30A0A075B6S6 120 aa4.88□□□□□ -1.63
LINCMD1-201ENST00000418518 MYCBP2O75592 4640 aa4.88□□□□□ -1.63
LINCMD1-201ENST00000418518 V9GYY9 64 aa4.87□□□□□ -1.63
LINCMD1-201ENST00000418518 ACYP2P14621 99 aa4.86□□□□□ -1.63
LINCMD1-201ENST00000418518 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
LINCMD1-201ENST00000418518 A8MUN3 132 aa4.82□□□□□ -1.64
LINCMD1-201ENST00000418518 RPL37P61927 97 aaKnown RBP4.82□□□□□ -1.64
LINCMD1-201ENST00000418518 XP32Q5T750 250 aa4.81□□□□□ -1.64
LINCMD1-201ENST00000418518 KRTAP4-5Q9BYR2 181 aa4.81□□□□□ -1.64
LINCMD1-201ENST00000418518 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
LINCMD1-201ENST00000418518 BIRC6Q9NR09 4857 aa4.79□□□□□ -1.64
LINCMD1-201ENST00000418518 HERC2O95714 4834 aa4.78□□□□□ -1.64
LINCMD1-201ENST00000418518 SPINK7P58062 85 aa4.78□□□□□ -1.64
LINCMD1-201ENST00000418518 TPRXLQ17RH7 258 aa4.78□□□□□ -1.64
LINCMD1-201ENST00000418518 Q5VV11 94 aa4.76□□□□□ -1.65
LINCMD1-201ENST00000418518 ATP11AUNQ6ZP68 121 aa4.76□□□□□ -1.65
LINCMD1-201ENST00000418518 CHKB-CPT1BH3BT56 60 aa4.75□□□□□ -1.65
LINCMD1-201ENST00000418518 KRTAP3-1Q9BYR8 98 aa4.74□□□□□ -1.65
LINCMD1-201ENST00000418518 ABCA13Q86UQ4 5058 aa4.73□□□□□ -1.65
LINCMD1-201ENST00000418518 PSPHP1O15172 72 aa4.73□□□□□ -1.65
LINCMD1-201ENST00000418518 COX6B2Q6YFQ2 88 aa4.73□□□□□ -1.65
LINCMD1-201ENST00000418518 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
LINCMD1-201ENST00000418518 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
LINCMD1-201ENST00000418518 LRP2P98164 4655 aa4.67□□□□□ -1.66
LINCMD1-201ENST00000418518 SPTSSBQ8NFR3 76 aa4.66□□□□□ -1.66
LINCMD1-201ENST00000418518 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
LINCMD1-201ENST00000418518 MUC17Q685J3 4493 aa4.66□□□□□ -1.66
LINCMD1-201ENST00000418518 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms