RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 NOTCH2NLQ7Z3S9 236 aa6.92□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 DNHD1Q96M86 4753 aa6.91□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 VPS13DQ5THJ4 4388 aa6.9□□□□□ -1.31
CSPG4P3Y-201ENST00000418188 MEGF8Q7Z7M0 2845 aa6.89□□□□□ -1.31
CSPG4P3Y-201ENST00000418188 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
CSPG4P3Y-201ENST00000418188 A6NED7 52 aa6.88□□□□□ -1.31
CSPG4P3Y-201ENST00000418188 Q5VV11 94 aa6.88□□□□□ -1.31
CSPG4P3Y-201ENST00000418188 SPAG11AQ6PDA7 123 aa6.88□□□□□ -1.31
CSPG4P3Y-201ENST00000418188 LINC00313P59037 77 aa6.87□□□□□ -1.31
CSPG4P3Y-201ENST00000418188 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
CSPG4P3Y-201ENST00000418188 C4orf48Q5BLP8 95 aa6.84□□□□□ -1.31
CSPG4P3Y-201ENST00000418188 KRTAP21-3Q3LHN1 58 aa6.83□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 PRKDCP78527 4128 aaKnown RBP6.83□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 Q5W150 140 aa6.83□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 SPTSSBQ8NFR3 76 aa6.83□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 RETNLBQ9BQ08 111 aa6.83□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 HRES1P13985 223 aa6.83□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 HECTD4Q9Y4D8 3996 aa6.82□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 KMT2AQ03164 3969 aa6.82□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 PMAIP1Q13794 54 aa6.81□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 ACYP2P14621 99 aa6.81□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 Q75L30 129 aa6.8□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 FRAS1Q86XX4 4008 aa6.79□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 DNAH8Q96JB1 4490 aa6.79□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 DNAH2Q9P225 4427 aa6.78□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 LINC01558Q9Y6Z2 57 aa6.78□□□□□ -1.32
CSPG4P3Y-201ENST00000418188 FBN3Q75N90 2809 aa6.77□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 KRTAP13-2Q52LG2 175 aa6.76□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 PLA2G1BP04054 148 aaKnown RBP6.76□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 A8MU10 97 aa6.74□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 TYMSOSQ8TAI1 123 aa6.74□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 Q6ZSA8 131 aa6.73□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 IGKV2D-30A0A075B6S6 120 aa6.73□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 IGKV2-30P06310 120 aa6.73□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 ATP11AUNQ6ZP68 121 aa6.72□□□□□ -1.33
CSPG4P3Y-201ENST00000418188 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
CSPG4P3Y-201ENST00000418188 LCA10Q71F78 164 aa6.7□□□□□ -1.34
CSPG4P3Y-201ENST00000418188 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
CSPG4P3Y-201ENST00000418188 SPINK1P00995 79 aa6.68□□□□□ -1.34
CSPG4P3Y-201ENST00000418188 DNAH11Q96DT5 4516 aa6.68□□□□□ -1.34
CSPG4P3Y-201ENST00000418188 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
CSPG4P3Y-201ENST00000418188 SPINK7P58062 85 aa6.65□□□□□ -1.34
CSPG4P3Y-201ENST00000418188 A0A1B0GU69 56 aa6.65□□□□□ -1.34
CSPG4P3Y-201ENST00000418188 DNAH6Q9C0G6 4158 aa6.65□□□□□ -1.35
CSPG4P3Y-201ENST00000418188 C7orf65Q6ZTY9 151 aa6.64□□□□□ -1.35
CSPG4P3Y-201ENST00000418188 LINC00304Q8N9R0 145 aa6.63□□□□□ -1.35
CSPG4P3Y-201ENST00000418188 DNAH5Q8TE73 4624 aa6.62□□□□□ -1.35
CSPG4P3Y-201ENST00000418188 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
CSPG4P3Y-201ENST00000418188 LRP1BQ9NZR2 4599 aa6.59□□□□□ -1.35
CSPG4P3Y-201ENST00000418188 KTN1-AS1Q86SY8 53 aa6.59□□□□□ -1.35
CSPG4P3Y-201ENST00000418188 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.35
CSPG4P3Y-201ENST00000418188 SMR3BP02814 79 aaPredicted RBP6.58□□□□□ -1.36
CSPG4P3Y-201ENST00000418188 SEC61GP60059 68 aa6.58□□□□□ -1.36
CSPG4P3Y-201ENST00000418188 A6NN06 94 aa6.52□□□□□ -1.37
CSPG4P3Y-201ENST00000418188 UQCR11O14957 56 aa6.52□□□□□ -1.37
CSPG4P3Y-201ENST00000418188 Q8N1X5 172 aa6.52□□□□□ -1.37
CSPG4P3Y-201ENST00000418188 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
CSPG4P3Y-201ENST00000418188 C9orf92A6NGG3 77 aa6.51□□□□□ -1.37
CSPG4P3Y-201ENST00000418188 VPS13BQ7Z7G8 4022 aa6.49□□□□□ -1.37
CSPG4P3Y-201ENST00000418188 MIR22HGQ0VDD5 57 aa6.49□□□□□ -1.37
CSPG4P3Y-201ENST00000418188 HYDINQ4G0P3 5121 aa6.48□□□□□ -1.37
CSPG4P3Y-201ENST00000418188 PKD1P98161 4303 aa6.46□□□□□ -1.38
CSPG4P3Y-201ENST00000418188 FAT2Q9NYQ8 4349 aa6.45□□□□□ -1.38
CSPG4P3Y-201ENST00000418188 SPATA8Q6RVD6 105 aa6.43□□□□□ -1.38
CSPG4P3Y-201ENST00000418188 RBM12B-AS1Q9P1G2 102 aa6.4□□□□□ -1.38
CSPG4P3Y-201ENST00000418188 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
CSPG4P3Y-201ENST00000418188 A8MUU9 505 aa6.37□□□□□ -1.39
CSPG4P3Y-201ENST00000418188 PKHD1P08F94 4074 aa6.35□□□□□ -1.39
CSPG4P3Y-201ENST00000418188 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
CSPG4P3Y-201ENST00000418188 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
CSPG4P3Y-201ENST00000418188 PRAC1Q96KF2 57 aa6.3□□□□□ -1.4
CSPG4P3Y-201ENST00000418188 FAT1Q14517 4588 aa6.3□□□□□ -1.4
CSPG4P3Y-201ENST00000418188 SACSQ9NZJ4 4579 aa6.28□□□□□ -1.4
CSPG4P3Y-201ENST00000418188 A0A1B0GU33 70 aa6.26□□□□□ -1.41
CSPG4P3Y-201ENST00000418188 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
CSPG4P3Y-201ENST00000418188 ADM2Q7Z4H4 148 aa6.25□□□□□ -1.41
CSPG4P3Y-201ENST00000418188 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
CSPG4P3Y-201ENST00000418188 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
CSPG4P3Y-201ENST00000418188 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
CSPG4P3Y-201ENST00000418188 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.41
CSPG4P3Y-201ENST00000418188 K7ERS5 55 aa6.2□□□□□ -1.42
CSPG4P3Y-201ENST00000418188 H1FX-AS1Q4G0G2 97 aa6.19□□□□□ -1.42
CSPG4P3Y-201ENST00000418188 Q5VSD8 79 aa6.19□□□□□ -1.42
CSPG4P3Y-201ENST00000418188 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
CSPG4P3Y-201ENST00000418188 H0YAA0 97 aa6.17□□□□□ -1.42
CSPG4P3Y-201ENST00000418188 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
CSPG4P3Y-201ENST00000418188 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
CSPG4P3Y-201ENST00000418188 LINC01554Q52M75 96 aa6.12□□□□□ -1.43
CSPG4P3Y-201ENST00000418188 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
CSPG4P3Y-201ENST00000418188 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
CSPG4P3Y-201ENST00000418188 PKHD1L1Q86WI1 4243 aa6.1□□□□□ -1.43
CSPG4P3Y-201ENST00000418188 RYR2Q92736 4967 aa6.07□□□□□ -1.44
CSPG4P3Y-201ENST00000418188 XP32Q5T750 250 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms