RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 VPS13DQ5THJ4 4388 aa2.23□□□□□ -2.05
HMGB3P20-201ENST00000417997 A0A087WSZ3 146 aa2.23□□□□□ -2.05
HMGB3P20-201ENST00000417997 BPY2O14599 106 aa2.23□□□□□ -2.05
HMGB3P20-201ENST00000417997 Q6Q795 121 aa2.23□□□□□ -2.05
HMGB3P20-201ENST00000417997 IMUPQ9GZP8 106 aa2.23□□□□□ -2.05
HMGB3P20-201ENST00000417997 PLECQ15149 4684 aaKnown RBP2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 A0A0G2JQZ4 141 aa2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 SMR3BP02814 79 aaPredicted RBP2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 CRYGAP11844 174 aa2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 SEC61GP60059 68 aa2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 FAM229BQ4G0N7 80 aa2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 HRCT1Q6UXD1 115 aa2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 SS18L2Q9UHA2 77 aa2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 DNAH7Q8WXX0 4024 aa2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 LYSTQ99698 3801 aa2.22□□□□□ -2.05
HMGB3P20-201ENST00000417997 FAM236AA0A1B0GUQ0 79 aa2.21□□□□□ -2.06
HMGB3P20-201ENST00000417997 FAM236BA0A1B0GV22 79 aa2.21□□□□□ -2.06
HMGB3P20-201ENST00000417997 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
HMGB3P20-201ENST00000417997 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
HMGB3P20-201ENST00000417997 SPINK6Q6UWN8 80 aa2.21□□□□□ -2.06
HMGB3P20-201ENST00000417997 DNAH10Q8IVF4 4471 aa2.21□□□□□ -2.06
HMGB3P20-201ENST00000417997 DNAH6Q9C0G6 4158 aa2.2□□□□□ -2.06
HMGB3P20-201ENST00000417997 A0A087WVE0 104 aa2.2□□□□□ -2.06
HMGB3P20-201ENST00000417997 C5orf47Q569G3 176 aa2.2□□□□□ -2.06
HMGB3P20-201ENST00000417997 SSBP3-AS1Q7Z2R9 100 aa2.2□□□□□ -2.06
HMGB3P20-201ENST00000417997 ANAPC13Q9BS18 74 aa2.2□□□□□ -2.06
HMGB3P20-201ENST00000417997 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
HMGB3P20-201ENST00000417997 TGP01266 2768 aa2.2□□□□□ -2.06
HMGB3P20-201ENST00000417997 J3KT08 172 aa2.19□□□□□ -2.06
HMGB3P20-201ENST00000417997 ATOX1O00244 68 aa2.19□□□□□ -2.06
HMGB3P20-201ENST00000417997 NDUFB1O75438 58 aa2.19□□□□□ -2.06
HMGB3P20-201ENST00000417997 CD164Q04900 197 aa2.19□□□□□ -2.06
HMGB3P20-201ENST00000417997 Q5VSD8 79 aa2.19□□□□□ -2.06
HMGB3P20-201ENST00000417997 LIMD2Q9BT23 127 aa2.19□□□□□ -2.06
HMGB3P20-201ENST00000417997 IGKV4-1P06312 121 aa2.18□□□□□ -2.06
HMGB3P20-201ENST00000417997 DEFB116Q30KQ4 102 aa2.18□□□□□ -2.06
HMGB3P20-201ENST00000417997 Q8N9L7 120 aa2.18□□□□□ -2.06
HMGB3P20-201ENST00000417997 DNAH17Q9UFH2 4485 aa2.17□□□□□ -2.06
HMGB3P20-201ENST00000417997 A8MWP4 228 aa2.17□□□□□ -2.06
HMGB3P20-201ENST00000417997 K7EQZ3 153 aa2.17□□□□□ -2.06
HMGB3P20-201ENST00000417997 KRTAP13-2Q52LG2 175 aa2.17□□□□□ -2.06
HMGB3P20-201ENST00000417997 PP632Q6XCG6 107 aa2.17□□□□□ -2.06
HMGB3P20-201ENST00000417997 HCG22E2RYF7 251 aa2.16□□□□□ -2.06
HMGB3P20-201ENST00000417997 SPAG11AQ6PDA7 123 aa2.16□□□□□ -2.06
HMGB3P20-201ENST00000417997 WFDC13Q8IUB5 93 aa2.16□□□□□ -2.06
HMGB3P20-201ENST00000417997 SMIM20Q8N5G0 67 aa2.16□□□□□ -2.06
HMGB3P20-201ENST00000417997 LINC00304Q8N9R0 145 aa2.16□□□□□ -2.06
HMGB3P20-201ENST00000417997 LINC00472Q9H8W2 130 aa2.16□□□□□ -2.06
HMGB3P20-201ENST00000417997 KMT2AQ03164 3969 aa2.15□□□□□ -2.06
HMGB3P20-201ENST00000417997 IGHV6-1A0A0B4J1U7 121 aa2.15□□□□□ -2.07
HMGB3P20-201ENST00000417997 A0A1B0GVX0 72 aa2.15□□□□□ -2.07
HMGB3P20-201ENST00000417997 SPINK1P00995 79 aa2.15□□□□□ -2.07
HMGB3P20-201ENST00000417997 KRTAP10-4P60372 401 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P20-201ENST00000417997 RPS28P62857 69 aaKnown RBP2.15□□□□□ -2.07
HMGB3P20-201ENST00000417997 ASB16-AS1Q495Z4 193 aa2.15□□□□□ -2.07
HMGB3P20-201ENST00000417997 CASC2Q6XLA1 102 aa2.15□□□□□ -2.07
HMGB3P20-201ENST00000417997 PRR15Q8IV56 129 aa2.15□□□□□ -2.07
HMGB3P20-201ENST00000417997 Q96NJ1 140 aa2.15□□□□□ -2.07
HMGB3P20-201ENST00000417997 DNAH2Q9P225 4427 aa2.14□□□□□ -2.07
HMGB3P20-201ENST00000417997 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
HMGB3P20-201ENST00000417997 C8orf87E5RJ46 101 aa2.14□□□□□ -2.07
HMGB3P20-201ENST00000417997 UQCRQO14949 82 aa2.14□□□□□ -2.07
HMGB3P20-201ENST00000417997 COX7CP15954 63 aa2.14□□□□□ -2.07
HMGB3P20-201ENST00000417997 RPS29P62273 56 aaKnown RBP2.14□□□□□ -2.07
HMGB3P20-201ENST00000417997 SERP2Q8N6R1 65 aa2.14□□□□□ -2.07
HMGB3P20-201ENST00000417997 FRAS1Q86XX4 4008 aa2.14□□□□□ -2.07
HMGB3P20-201ENST00000417997 MMP24-AS1A0A0U1RRL7 71 aa2.13□□□□□ -2.07
HMGB3P20-201ENST00000417997 hDV103S1A0JD37 113 aa2.13□□□□□ -2.07
HMGB3P20-201ENST00000417997 NDUFS5O43920 106 aa2.13□□□□□ -2.07
HMGB3P20-201ENST00000417997 Q5XG85 94 aa2.13□□□□□ -2.07
HMGB3P20-201ENST00000417997 C8orf17Q9NRJ1 99 aa2.13□□□□□ -2.07
HMGB3P20-201ENST00000417997 CCDC179H3BU77 68 aa2.12□□□□□ -2.07
HMGB3P20-201ENST00000417997 TMEM258P61165 79 aa2.12□□□□□ -2.07
HMGB3P20-201ENST00000417997 C1orf195Q5TG92 126 aa2.12□□□□□ -2.07
HMGB3P20-201ENST00000417997 TMEM254Q8TBM7 123 aa2.12□□□□□ -2.07
HMGB3P20-201ENST00000417997 MRPL34Q9BQ48 92 aaKnown RBP2.12□□□□□ -2.07
HMGB3P20-201ENST00000417997 PKD1P98161 4303 aa2.12□□□□□ -2.07
HMGB3P20-201ENST00000417997 SACSQ9NZJ4 4579 aa2.12□□□□□ -2.07
HMGB3P20-201ENST00000417997 C20orf197Q8N268 126 aa2.11□□□□□ -2.07
HMGB3P20-201ENST00000417997 HYDINQ4G0P3 5121 aa2.11□□□□□ -2.07
HMGB3P20-201ENST00000417997 DNAH8Q96JB1 4490 aa2.11□□□□□ -2.07
HMGB3P20-201ENST00000417997 FAT2Q9NYQ8 4349 aa2.11□□□□□ -2.07
HMGB3P20-201ENST00000417997 H0Y9P7 68 aa2.1□□□□□ -2.07
HMGB3P20-201ENST00000417997 MP68P56378 58 aa2.1□□□□□ -2.07
HMGB3P20-201ENST00000417997 LINC00313P59037 77 aa2.1□□□□□ -2.07
HMGB3P20-201ENST00000417997 TP53AIP1Q9HCN2 124 aa2.1□□□□□ -2.07
HMGB3P20-201ENST00000417997 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
HMGB3P20-201ENST00000417997 DNAH5Q8TE73 4624 aa2.1□□□□□ -2.07
HMGB3P20-201ENST00000417997 TRAV22A0A0B4J277 110 aa2.09□□□□□ -2.07
HMGB3P20-201ENST00000417997 ATP5EP56381 51 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P20-201ENST00000417997 RETNLBQ9BQ08 111 aa2.09□□□□□ -2.07
HMGB3P20-201ENST00000417997 SNURFQ9Y675 71 aa2.09□□□□□ -2.07
HMGB3P20-201ENST00000417997 H3BPC8 53 aa2.08□□□□□ -2.08
HMGB3P20-201ENST00000417997 NDUFC1O43677 76 aa2.08□□□□□ -2.08
HMGB3P20-201ENST00000417997 OXTP01178 125 aa2.08□□□□□ -2.08
HMGB3P20-201ENST00000417997 KLKP1Q107X0 134 aa2.08□□□□□ -2.08
HMGB3P20-201ENST00000417997 HECTD4Q9Y4D8 3996 aa2.08□□□□□ -2.08
HMGB3P20-201ENST00000417997 A0A0U1RQV1 116 aa2.07□□□□□ -2.08
HMGB3P20-201ENST00000417997 C9orf92A6NGG3 77 aa2.07□□□□□ -2.08
HMGB3P20-201ENST00000417997 FP248Q71RG6 208 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms