RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 DNAL4O96015 105 aa3.67□□□□□ -1.82
HLA-DPA1-241ENST00000417724 COX8AP10176 69 aa3.67□□□□□ -1.82
HLA-DPA1-241ENST00000417724 HIST1H2BLQ99880 126 aa3.67□□□□□ -1.82
HLA-DPA1-241ENST00000417724 ORMDL1Q9P0S3 153 aa3.67□□□□□ -1.82
HLA-DPA1-241ENST00000417724 PRO1854Q9UHT4 67 aa3.67□□□□□ -1.82
HLA-DPA1-241ENST00000417724 J3KT08 172 aa3.66□□□□□ -1.82
HLA-DPA1-241ENST00000417724 H1FX-AS1Q4G0G2 97 aa3.66□□□□□ -1.82
HLA-DPA1-241ENST00000417724 A6NN06 94 aa3.65□□□□□ -1.83
HLA-DPA1-241ENST00000417724 NDUFB1O75438 58 aa3.65□□□□□ -1.83
HLA-DPA1-241ENST00000417724 HIST3H2BBQ8N257 126 aa3.65□□□□□ -1.83
HLA-DPA1-241ENST00000417724 VPS25Q9BRG1 176 aa3.65□□□□□ -1.83
HLA-DPA1-241ENST00000417724 TRIAP1O43715 76 aa3.64□□□□□ -1.83
HLA-DPA1-241ENST00000417724 DSCR8Q96T75 97 aa3.64□□□□□ -1.83
HLA-DPA1-241ENST00000417724 HIGD1BQ9P298 99 aa3.64□□□□□ -1.83
HLA-DPA1-241ENST00000417724 TMEM238LA0A1B0GVL6 79 aa3.63□□□□□ -1.83
HLA-DPA1-241ENST00000417724 A6NJY4 79 aa3.63□□□□□ -1.83
HLA-DPA1-241ENST00000417724 C21orf62-AS1Q17RA5 79 aa3.63□□□□□ -1.83
HLA-DPA1-241ENST00000417724 C14orf144Q96I85 54 aa3.63□□□□□ -1.83
HLA-DPA1-241ENST00000417724 IGKV3D-7A0A0C4DH55 119 aa3.62□□□□□ -1.83
HLA-DPA1-241ENST00000417724 UBE2V1Q13404 147 aa3.62□□□□□ -1.83
HLA-DPA1-241ENST00000417724 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
HLA-DPA1-241ENST00000417724 RBM3P98179 157 aaKnown RBP3.61□□□□□ -1.83
HLA-DPA1-241ENST00000417724 CEND1Q8N111 149 aa3.61□□□□□ -1.83
HLA-DPA1-241ENST00000417724 C8orf17Q9NRJ1 99 aa3.61□□□□□ -1.83
HLA-DPA1-241ENST00000417724 COX6CP09669 75 aa3.6□□□□□ -1.83
HLA-DPA1-241ENST00000417724 PSMB2P49721 201 aa3.6□□□□□ -1.83
HLA-DPA1-241ENST00000417724 Q6ZQT0 140 aa3.59□□□□□ -1.83
HLA-DPA1-241ENST00000417724 C2orf91Q6ZV80 131 aa3.59□□□□□ -1.83
HLA-DPA1-241ENST00000417724 Q6ZVQ6 151 aa3.59□□□□□ -1.83
HLA-DPA1-241ENST00000417724 C9JAW5 83 aa3.58□□□□□ -1.84
HLA-DPA1-241ENST00000417724 S100A6P06703 90 aa3.58□□□□□ -1.84
HLA-DPA1-241ENST00000417724 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
HLA-DPA1-241ENST00000417724 Q5VV11 94 aa3.58□□□□□ -1.84
HLA-DPA1-241ENST00000417724 MT1BP07438 61 aa3.57□□□□□ -1.84
HLA-DPA1-241ENST00000417724 FXYD2P54710 66 aa3.57□□□□□ -1.84
HLA-DPA1-241ENST00000417724 PAM16Q9Y3D7 125 aa3.57□□□□□ -1.84
HLA-DPA1-241ENST00000417724 FAM236AA0A1B0GUQ0 79 aa3.56□□□□□ -1.84
HLA-DPA1-241ENST00000417724 FAM236BA0A1B0GV22 79 aa3.56□□□□□ -1.84
HLA-DPA1-241ENST00000417724 SPATA45Q537H7 98 aa3.56□□□□□ -1.84
HLA-DPA1-241ENST00000417724 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
HLA-DPA1-241ENST00000417724 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
HLA-DPA1-241ENST00000417724 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
HLA-DPA1-241ENST00000417724 A0A1B0GW54 56 aa3.54□□□□□ -1.84
HLA-DPA1-241ENST00000417724 MRPL34Q9BQ48 92 aaKnown RBP3.54□□□□□ -1.84
HLA-DPA1-241ENST00000417724 VAMP8Q9BV40 100 aa3.54□□□□□ -1.84
HLA-DPA1-241ENST00000417724 IGKV2D-30A0A075B6S6 120 aa3.53□□□□□ -1.84
HLA-DPA1-241ENST00000417724 IGKV2-30P06310 120 aa3.53□□□□□ -1.84
HLA-DPA1-241ENST00000417724 BAALC-AS2P0C853 105 aa3.53□□□□□ -1.84
HLA-DPA1-241ENST00000417724 S100A1P23297 94 aa3.53□□□□□ -1.84
HLA-DPA1-241ENST00000417724 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
HLA-DPA1-241ENST00000417724 PRR15Q8IV56 129 aa3.53□□□□□ -1.84
HLA-DPA1-241ENST00000417724 TMEM254Q8TBM7 123 aa3.53□□□□□ -1.84
HLA-DPA1-241ENST00000417724 SPRR2GQ9BYE4 73 aa3.53□□□□□ -1.84
HLA-DPA1-241ENST00000417724 K7ERJ3 54 aa3.52□□□□□ -1.85
HLA-DPA1-241ENST00000417724 NDUFS5O43920 106 aa3.52□□□□□ -1.85
HLA-DPA1-241ENST00000417724 SCGB1C2P0DMR2 95 aa3.52□□□□□ -1.85
HLA-DPA1-241ENST00000417724 C5orf47Q569G3 176 aa3.52□□□□□ -1.85
HLA-DPA1-241ENST00000417724 KMT2DO14686 5537 aa3.51□□□□□ -1.85
HLA-DPA1-241ENST00000417724 C7orf65Q6ZTY9 151 aa3.51□□□□□ -1.85
HLA-DPA1-241ENST00000417724 MMP24-AS1A0A0U1RRL7 71 aa3.5□□□□□ -1.85
HLA-DPA1-241ENST00000417724 hDV103S1A0JD37 113 aa3.5□□□□□ -1.85
HLA-DPA1-241ENST00000417724 PDE6GP18545 87 aa3.5□□□□□ -1.85
HLA-DPA1-241ENST00000417724 HSD52Q0P140 79 aa3.5□□□□□ -1.85
HLA-DPA1-241ENST00000417724 JMJD7-PLA2G4BH0Y9G9 81 aa3.49□□□□□ -1.85
HLA-DPA1-241ENST00000417724 NREPQ16612 68 aa3.49□□□□□ -1.85
HLA-DPA1-241ENST00000417724 C4orf26Q17RF5 130 aa3.49□□□□□ -1.85
HLA-DPA1-241ENST00000417724 CSAG1Q6PB30 78 aa3.49□□□□□ -1.85
HLA-DPA1-241ENST00000417724 LOC110117498A0A087WWA1 95 aa3.48□□□□□ -1.85
HLA-DPA1-241ENST00000417724 Q5W150 140 aa3.48□□□□□ -1.85
HLA-DPA1-241ENST00000417724 IMUPQ9GZP8 106 aa3.48□□□□□ -1.85
HLA-DPA1-241ENST00000417724 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
HLA-DPA1-241ENST00000417724 KLKP1Q107X0 134 aa3.45□□□□□ -1.86
HLA-DPA1-241ENST00000417724 S4R3F8 94 aa3.45□□□□□ -1.86
HLA-DPA1-241ENST00000417724 K7EQZ3 153 aa3.44□□□□□ -1.86
HLA-DPA1-241ENST00000417724 SPRR2EP22531 72 aa3.44□□□□□ -1.86
HLA-DPA1-241ENST00000417724 SPRR2BP35325 72 aa3.44□□□□□ -1.86
HLA-DPA1-241ENST00000417724 SPRR2AP35326 72 aa3.44□□□□□ -1.86
HLA-DPA1-241ENST00000417724 C14orf132Q9NPU4 83 aa3.44□□□□□ -1.86
HLA-DPA1-241ENST00000417724 ATXN8Q156A1 80 aa3.43□□□□□ -1.86
HLA-DPA1-241ENST00000417724 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
HLA-DPA1-241ENST00000417724 LCA10Q71F78 164 aa3.42□□□□□ -1.86
HLA-DPA1-241ENST00000417724 KRTAP3-1Q9BYR8 98 aa3.42□□□□□ -1.86
HLA-DPA1-241ENST00000417724 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
HLA-DPA1-241ENST00000417724 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
HLA-DPA1-241ENST00000417724 CRIPTQ9P021 101 aa3.41□□□□□ -1.86
HLA-DPA1-241ENST00000417724 HCG22E2RYF7 251 aa3.4□□□□□ -1.87
HLA-DPA1-241ENST00000417724 BPY2O14599 106 aa3.4□□□□□ -1.87
HLA-DPA1-241ENST00000417724 CXCL6P80162 114 aa3.4□□□□□ -1.87
HLA-DPA1-241ENST00000417724 CASC2Q6XLA1 102 aa3.4□□□□□ -1.87
HLA-DPA1-241ENST00000417724 C1orf64Q8NEQ6 169 aa3.4□□□□□ -1.87
HLA-DPA1-241ENST00000417724 UQCR10Q9UDW1 63 aa3.39□□□□□ -1.87
HLA-DPA1-241ENST00000417724 KRTAP4-8Q9BYQ9 185 aa3.38□□□□□ -1.87
HLA-DPA1-241ENST00000417724 PYY3Q5JQD4 70 aa3.36□□□□□ -1.87
HLA-DPA1-241ENST00000417724 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
HLA-DPA1-241ENST00000417724 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
HLA-DPA1-241ENST00000417724 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
HLA-DPA1-241ENST00000417724 Q8N9L7 120 aa3.35□□□□□ -1.87
HLA-DPA1-241ENST00000417724 NAA38Q9BRA0 125 aaKnown RBP3.34□□□□□ -1.87
HLA-DPA1-241ENST00000417724 SPRR2DP22532 72 aa3.32□□□□□ -1.88
HLA-DPA1-241ENST00000417724 M0R143 59 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms