RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 TMEM254Q8TBM7 123 aa11.03□□□□□ -0.64
RAB3IP-205ENST00000417413 SNURFQ9Y675 71 aa11.02□□□□□ -0.64
RAB3IP-205ENST00000417413 LIMD2Q9BT23 127 aa11.02□□□□□ -0.65
RAB3IP-205ENST00000417413 C4orf48Q5BLP8 95 aa11.01□□□□□ -0.65
RAB3IP-205ENST00000417413 NOTCH2NLQ7Z3S9 236 aa11.01□□□□□ -0.65
RAB3IP-205ENST00000417413 EPPK1P58107 5090 aaKnown RBP11□□□□□ -0.65
RAB3IP-205ENST00000417413 A0A0U1RQV1 116 aa11□□□□□ -0.65
RAB3IP-205ENST00000417413 SPINK1P00995 79 aa11□□□□□ -0.65
RAB3IP-205ENST00000417413 HSPG2P98160 4391 aa10.99□□□□□ -0.65
RAB3IP-205ENST00000417413 FAT1Q14517 4588 aa10.99□□□□□ -0.65
RAB3IP-205ENST00000417413 RYR1P21817 5038 aa10.99□□□□□ -0.65
RAB3IP-205ENST00000417413 C5orf47Q569G3 176 aa10.97□□□□□ -0.65
RAB3IP-205ENST00000417413 LINC00304Q8N9R0 145 aa10.97□□□□□ -0.65
RAB3IP-205ENST00000417413 H7BZZ5 65 aa10.95□□□□□ -0.66
RAB3IP-205ENST00000417413 RPS29P62273 56 aaKnown RBP10.95□□□□□ -0.66
RAB3IP-205ENST00000417413 TMEM258P61165 79 aa10.94□□□□□ -0.66
RAB3IP-205ENST00000417413 SPAG11AQ6PDA7 123 aa10.94□□□□□ -0.66
RAB3IP-205ENST00000417413 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
RAB3IP-205ENST00000417413 C8orf87E5RJ46 101 aa10.91□□□□□ -0.66
RAB3IP-205ENST00000417413 ZCCHC13Q8WW36 166 aaKnown RBP10.91□□□□□ -0.66
RAB3IP-205ENST00000417413 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
RAB3IP-205ENST00000417413 NDUFC1O43677 76 aa10.9□□□□□ -0.66
RAB3IP-205ENST00000417413 PKHD1L1Q86WI1 4243 aa10.9□□□□□ -0.67
RAB3IP-205ENST00000417413 KRTAP17-1Q9BYP8 105 aa10.88□□□□□ -0.67
RAB3IP-205ENST00000417413 TP53AIP1Q9HCN2 124 aa10.87□□□□□ -0.67
RAB3IP-205ENST00000417413 H0Y9P7 68 aa10.85□□□□□ -0.67
RAB3IP-205ENST00000417413 MP68P56378 58 aa10.85□□□□□ -0.67
RAB3IP-205ENST00000417413 LINC00313P59037 77 aa10.85□□□□□ -0.67
RAB3IP-205ENST00000417413 NDUFS5O43920 106 aa10.82□□□□□ -0.68
RAB3IP-205ENST00000417413 TRAV22A0A0B4J277 110 aa10.81□□□□□ -0.68
RAB3IP-205ENST00000417413 H3BPC8 53 aa10.81□□□□□ -0.68
RAB3IP-205ENST00000417413 LINC00208Q96KT6 92 aa10.8□□□□□ -0.68
RAB3IP-205ENST00000417413 FAM236DA0A1B0GTK5 79 aa10.79□□□□□ -0.68
RAB3IP-205ENST00000417413 KRTAP16-1A8MUX0 517 aa10.79□□□□□ -0.68
RAB3IP-205ENST00000417413 FAM236CP0DP71 79 aa10.79□□□□□ -0.68
RAB3IP-205ENST00000417413 KRTAP10-8P60410 259 aa10.77□□□□□ -0.68
RAB3IP-205ENST00000417413 BIRC6Q9NR09 4857 aa10.76□□□□□ -0.69
RAB3IP-205ENST00000417413 OXTP01178 125 aa10.76□□□□□ -0.69
RAB3IP-205ENST00000417413 Q8N9P0 234 aaPredicted RBP10.76□□□□□ -0.69
RAB3IP-205ENST00000417413 C1orf64Q8NEQ6 169 aa10.75□□□□□ -0.69
RAB3IP-205ENST00000417413 KRTAP13-3Q3SY46 172 aa10.72□□□□□ -0.69
RAB3IP-205ENST00000417413 Q5W150 140 aa10.72□□□□□ -0.69
RAB3IP-205ENST00000417413 ATP5EP56381 51 aaPredicted RBP10.69□□□□□ -0.7
RAB3IP-205ENST00000417413 RPS28P62857 69 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-205ENST00000417413 KRTAP4-5Q9BYR2 181 aa10.67□□□□□ -0.7
RAB3IP-205ENST00000417413 FLG2Q5D862 2391 aaPredicted RBP10.65□□□□□ -0.7
RAB3IP-205ENST00000417413 RETNLBQ9BQ08 111 aa10.63□□□□□ -0.71
RAB3IP-205ENST00000417413 SERP1Q9Y6X1 66 aa10.61□□□□□ -0.71
RAB3IP-205ENST00000417413 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
RAB3IP-205ENST00000417413 MT1HL1P0DM35 61 aa10.59□□□□□ -0.71
RAB3IP-205ENST00000417413 LOC101927531A0A1B0GV80 90 aa10.58□□□□□ -0.72
RAB3IP-205ENST00000417413 TNXBP22105 4242 aa10.58□□□□□ -0.72
RAB3IP-205ENST00000417413 SPANXA2-OT1Q8N9U9 137 aa10.58□□□□□ -0.72
RAB3IP-205ENST00000417413 HERC2O95714 4834 aa10.57□□□□□ -0.72
RAB3IP-205ENST00000417413 CYP4F30PQ9H0H9 118 aa10.56□□□□□ -0.72
RAB3IP-205ENST00000417413 PCOTHQ58A44 107 aa10.55□□□□□ -0.72
RAB3IP-205ENST00000417413 C9orf92A6NGG3 77 aa10.54□□□□□ -0.72
RAB3IP-205ENST00000417413 J3QL48 77 aa10.53□□□□□ -0.72
RAB3IP-205ENST00000417413 PRR4Q16378 134 aa10.53□□□□□ -0.72
RAB3IP-205ENST00000417413 FAT3Q8TDW7 4589 aa10.53□□□□□ -0.72
RAB3IP-205ENST00000417413 IGLV7-46A0A075B6I9 117 aa10.5□□□□□ -0.73
RAB3IP-205ENST00000417413 MYCBP2O75592 4640 aa10.49□□□□□ -0.73
RAB3IP-205ENST00000417413 A8MUU9 505 aa10.49□□□□□ -0.73
RAB3IP-205ENST00000417413 IGKV2-30P06310 120 aa10.49□□□□□ -0.73
RAB3IP-205ENST00000417413 C20orf166-AS1Q96NR2 134 aa10.49□□□□□ -0.73
RAB3IP-205ENST00000417413 FP248Q71RG6 208 aaPredicted RBP10.47□□□□□ -0.73
RAB3IP-205ENST00000417413 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
RAB3IP-205ENST00000417413 ABCA13Q86UQ4 5058 aa10.4□□□□□ -0.74
RAB3IP-205ENST00000417413 IGKV2D-30A0A075B6S6 120 aa10.36□□□□□ -0.75
RAB3IP-205ENST00000417413 HRES1P13985 223 aa10.36□□□□□ -0.75
RAB3IP-205ENST00000417413 SMIM26A0A096LP01 95 aa10.36□□□□□ -0.75
RAB3IP-205ENST00000417413 Q75L30 129 aa10.36□□□□□ -0.75
RAB3IP-205ENST00000417413 C7orf65Q6ZTY9 151 aa10.29□□□□□ -0.76
RAB3IP-205ENST00000417413 COA5Q86WW8 74 aa10.28□□□□□ -0.76
RAB3IP-205ENST00000417413 XP32Q5T750 250 aa10.25□□□□□ -0.77
RAB3IP-205ENST00000417413 DMAC1Q96GE9 116 aa10.24□□□□□ -0.77
RAB3IP-205ENST00000417413 RPL37P61927 97 aaKnown RBP10.22□□□□□ -0.77
RAB3IP-205ENST00000417413 TPRXLQ17RH7 258 aa10.19□□□□□ -0.78
RAB3IP-205ENST00000417413 ACYP2P14621 99 aa10.18□□□□□ -0.78
RAB3IP-205ENST00000417413 SPINK7P58062 85 aa10.17□□□□□ -0.78
RAB3IP-205ENST00000417413 C4orf26Q17RF5 130 aa10.16□□□□□ -0.78
RAB3IP-205ENST00000417413 ATP11AUNQ6ZP68 121 aa10.16□□□□□ -0.78
RAB3IP-205ENST00000417413 MPLKIPQ8TAP9 179 aa10.15□□□□□ -0.78
RAB3IP-205ENST00000417413 PCLOQ9Y6V0 5065 aa10.14□□□□□ -0.79
RAB3IP-205ENST00000417413 Q1T7F1 81 aa10.12□□□□□ -0.79
RAB3IP-205ENST00000417413 A8MUN3 132 aa10.04□□□□□ -0.8
RAB3IP-205ENST00000417413 KRTAP3-1Q9BYR8 98 aa10.02□□□□□ -0.81
RAB3IP-205ENST00000417413 V9GYY9 64 aa10.02□□□□□ -0.81
RAB3IP-205ENST00000417413 CHKB-CPT1BH3BT56 60 aa10□□□□□ -0.81
RAB3IP-205ENST00000417413 COX6B2Q6YFQ2 88 aa9.95□□□□□ -0.82
RAB3IP-205ENST00000417413 LINC01558Q9Y6Z2 57 aa9.94□□□□□ -0.82
RAB3IP-205ENST00000417413 PSPHP1O15172 72 aa9.93□□□□□ -0.82
RAB3IP-205ENST00000417413 SEC61BP60468 96 aaKnown RBP9.89□□□□□ -0.83
RAB3IP-205ENST00000417413 Q5VV11 94 aa9.86□□□□□ -0.83
RAB3IP-205ENST00000417413 PRR15LQ9BU68 103 aa9.86□□□□□ -0.83
RAB3IP-205ENST00000417413 LPAP08519 4548 aa9.86□□□□□ -0.83
RAB3IP-205ENST00000417413 LRP2P98164 4655 aa9.84□□□□□ -0.83
RAB3IP-205ENST00000417413 HERC1Q15751 4861 aa9.84□□□□□ -0.83
RAB3IP-205ENST00000417413 SPTSSBQ8NFR3 76 aa9.74□□□□□ -0.85
RAB3IP-205ENST00000417413 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 479.9 ms