RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 TRBV20-1A0A075B6N2 111 aa8.01□□□□□ -1.13
ITGB1-204ENST00000417122 A0A1B0GVX0 72 aa8□□□□□ -1.13
ITGB1-204ENST00000417122 TSTD3H0UI37 97 aa8□□□□□ -1.13
ITGB1-204ENST00000417122 JMJD7-PLA2G4BH0Y9G9 81 aa8□□□□□ -1.13
ITGB1-204ENST00000417122 Q6ZQT0 140 aa8□□□□□ -1.13
ITGB1-204ENST00000417122 C8orf87E5RJ46 101 aa7.99□□□□□ -1.13
ITGB1-204ENST00000417122 J3KT08 172 aa7.98□□□□□ -1.13
ITGB1-204ENST00000417122 LYRM7Q5U5X0 104 aa7.98□□□□□ -1.13
ITGB1-204ENST00000417122 BATFQ16520 125 aa7.97□□□□□ -1.13
ITGB1-204ENST00000417122 LOC110117498A0A087WWA1 95 aa7.96□□□□□ -1.14
ITGB1-204ENST00000417122 A0A1B0GW54 56 aa7.95□□□□□ -1.14
ITGB1-204ENST00000417122 PDE6GP18545 87 aa7.94□□□□□ -1.14
ITGB1-204ENST00000417122 C14orf132Q9NPU4 83 aa7.93□□□□□ -1.14
ITGB1-204ENST00000417122 NDUFB1O75438 58 aa7.92□□□□□ -1.14
ITGB1-204ENST00000417122 LOC105371267A0A1B0GV96 52 aa7.91□□□□□ -1.14
ITGB1-204ENST00000417122 CRCT1Q9UGL9 99 aa7.9□□□□□ -1.14
ITGB1-204ENST00000417122 FAM236DA0A1B0GTK5 79 aa7.89□□□□□ -1.15
ITGB1-204ENST00000417122 FAM236CP0DP71 79 aa7.89□□□□□ -1.15
ITGB1-204ENST00000417122 C9orf118A6NHY6 69 aa7.88□□□□□ -1.15
ITGB1-204ENST00000417122 A8MWP4 228 aa7.88□□□□□ -1.15
ITGB1-204ENST00000417122 HRES1P13985 223 aa7.88□□□□□ -1.15
ITGB1-204ENST00000417122 RBM12B-AS1Q9P1G2 102 aa7.87□□□□□ -1.15
ITGB1-204ENST00000417122 TAX1BP3O14907 124 aa7.86□□□□□ -1.15
ITGB1-204ENST00000417122 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
ITGB1-204ENST00000417122 ZCCHC13Q8WW36 166 aaKnown RBP7.86□□□□□ -1.15
ITGB1-204ENST00000417122 C8orf17Q9NRJ1 99 aa7.86□□□□□ -1.15
ITGB1-204ENST00000417122 IGKV3D-7A0A0C4DH55 119 aa7.85□□□□□ -1.15
ITGB1-204ENST00000417122 A0A1W2PPM0 123 aa7.84□□□□□ -1.15
ITGB1-204ENST00000417122 H3BT86 120 aa7.84□□□□□ -1.15
ITGB1-204ENST00000417122 NREPQ16612 68 aa7.84□□□□□ -1.15
ITGB1-204ENST00000417122 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-204ENST00000417122 MTURNQ8N3F0 131 aa7.82□□□□□ -1.16
ITGB1-204ENST00000417122 FSIP2Q5CZC0 6907 aa7.81□□□□□ -1.16
ITGB1-204ENST00000417122 PRR15Q8IV56 129 aa7.8□□□□□ -1.16
ITGB1-204ENST00000417122 SPINK7P58062 85 aa7.79□□□□□ -1.16
ITGB1-204ENST00000417122 Q6ZVQ6 151 aa7.79□□□□□ -1.16
ITGB1-204ENST00000417122 KRTAP9-8Q9BYQ0 159 aa7.79□□□□□ -1.16
ITGB1-204ENST00000417122 MMP24-AS1A0A0U1RRL7 71 aa7.75□□□□□ -1.17
ITGB1-204ENST00000417122 TMEM254Q8TBM7 123 aa7.74□□□□□ -1.17
ITGB1-204ENST00000417122 SPCS1Q9Y6A9 102 aa7.74□□□□□ -1.17
ITGB1-204ENST00000417122 MRPL34Q9BQ48 92 aaKnown RBP7.73□□□□□ -1.17
ITGB1-204ENST00000417122 K7EQZ3 153 aa7.72□□□□□ -1.17
ITGB1-204ENST00000417122 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-204ENST00000417122 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
ITGB1-204ENST00000417122 BPY2O14599 106 aa7.69□□□□□ -1.18
ITGB1-204ENST00000417122 MT2AP02795 61 aa7.68□□□□□ -1.18
ITGB1-204ENST00000417122 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
ITGB1-204ENST00000417122 NDUFS5O43920 106 aa7.67□□□□□ -1.18
ITGB1-204ENST00000417122 COL5A1-AS1Q5SY13 56 aa7.67□□□□□ -1.18
ITGB1-204ENST00000417122 MT1FP04733 61 aa7.62□□□□□ -1.19
ITGB1-204ENST00000417122 K7EP34 96 aa7.61□□□□□ -1.19
ITGB1-204ENST00000417122 Q8N9L7 120 aa7.61□□□□□ -1.19
ITGB1-204ENST00000417122 PRO0461Q9UI25 63 aa7.61□□□□□ -1.19
ITGB1-204ENST00000417122 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
ITGB1-204ENST00000417122 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
ITGB1-204ENST00000417122 Q5W150 140 aa7.57□□□□□ -1.2
ITGB1-204ENST00000417122 LINC00846Q9NV44 126 aa7.57□□□□□ -1.2
ITGB1-204ENST00000417122 USH2AO75445 5202 aa7.57□□□□□ -1.2
ITGB1-204ENST00000417122 UBL5Q9BZL1 73 aa7.56□□□□□ -1.2
ITGB1-204ENST00000417122 IGKV2D-30A0A075B6S6 120 aa7.55□□□□□ -1.2
ITGB1-204ENST00000417122 HCG22E2RYF7 251 aa7.55□□□□□ -1.2
ITGB1-204ENST00000417122 IGKV2-30P06310 120 aa7.55□□□□□ -1.2
ITGB1-204ENST00000417122 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
ITGB1-204ENST00000417122 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
ITGB1-204ENST00000417122 GTF2H5Q6ZYL4 71 aa7.52□□□□□ -1.21
ITGB1-204ENST00000417122 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
ITGB1-204ENST00000417122 CXCL6P80162 114 aa7.5□□□□□ -1.21
ITGB1-204ENST00000417122 SSPOA2VEC9 5147 aa7.49□□□□□ -1.21
ITGB1-204ENST00000417122 PCP4L1A6NKN8 68 aa7.48□□□□□ -1.21
ITGB1-204ENST00000417122 F8W1H4 67 aa7.47□□□□□ -1.21
ITGB1-204ENST00000417122 ETDBQ3ZM63 59 aa7.44□□□□□ -1.22
ITGB1-204ENST00000417122 C4orf26Q17RF5 130 aa7.42□□□□□ -1.22
ITGB1-204ENST00000417122 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
ITGB1-204ENST00000417122 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-204ENST00000417122 TP53AIP1Q9HCN2 124 aa7.35□□□□□ -1.23
ITGB1-204ENST00000417122 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
ITGB1-204ENST00000417122 FCGBPQ9Y6R7 5405 aaPredicted RBP7.3□□□□□ -1.24
ITGB1-204ENST00000417122 C1orf64Q8NEQ6 169 aa7.29□□□□□ -1.24
ITGB1-204ENST00000417122 ACYP1P07311 99 aa7.28□□□□□ -1.24
ITGB1-204ENST00000417122 C5orf47Q569G3 176 aa7.27□□□□□ -1.25
ITGB1-204ENST00000417122 KRTAP9-7A8MTY7 169 aa7.26□□□□□ -1.25
ITGB1-204ENST00000417122 S4R3F8 94 aa7.26□□□□□ -1.25
ITGB1-204ENST00000417122 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
ITGB1-204ENST00000417122 FAM240AA0A1B0GVK7 77 aa7.23□□□□□ -1.25
ITGB1-204ENST00000417122 ATP5EP2Q5VTU8 51 aa7.21□□□□□ -1.26
ITGB1-204ENST00000417122 LCA10Q71F78 164 aa7.21□□□□□ -1.26
ITGB1-204ENST00000417122 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
ITGB1-204ENST00000417122 CYP4F30PQ9H0H9 118 aa7.2□□□□□ -1.26
ITGB1-204ENST00000417122 TRAV22A0A0B4J277 110 aa7.19□□□□□ -1.26
ITGB1-204ENST00000417122 FAM236AA0A1B0GUQ0 79 aa7.18□□□□□ -1.26
ITGB1-204ENST00000417122 FAM236BA0A1B0GV22 79 aa7.18□□□□□ -1.26
ITGB1-204ENST00000417122 HIST1H4AP62805 103 aaKnown RBP7.18□□□□□ -1.26
ITGB1-204ENST00000417122 LOC101927531A0A1B0GV80 90 aa7.16□□□□□ -1.26
ITGB1-204ENST00000417122 UQCRQO14949 82 aa7.12□□□□□ -1.27
ITGB1-204ENST00000417122 H0Y9P7 68 aa7.09□□□□□ -1.27
ITGB1-204ENST00000417122 LINC00643Q86TS7 51 aa7.09□□□□□ -1.27
ITGB1-204ENST00000417122 A0A087WVE0 104 aa7.08□□□□□ -1.28
ITGB1-204ENST00000417122 ATOX1O00244 68 aa7.08□□□□□ -1.28
ITGB1-204ENST00000417122 A0A1B0GV90 55 aa7.06□□□□□ -1.28
ITGB1-204ENST00000417122 SPRR2GQ9BYE4 73 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms