RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 IGHV6-1A0A0B4J1U7 121 aa7.73□□□□□ -1.17
LRRTM1-205ENST00000417012 Q6ZR54 194 aa7.73□□□□□ -1.17
LRRTM1-205ENST00000417012 LOC101927531A0A1B0GV80 90 aa7.72□□□□□ -1.17
LRRTM1-205ENST00000417012 ATP11AUNQ6ZP68 121 aa7.72□□□□□ -1.17
LRRTM1-205ENST00000417012 A0A1B0GVX0 72 aa7.72□□□□□ -1.17
LRRTM1-205ENST00000417012 LINC00483Q53H64 154 aa7.71□□□□□ -1.17
LRRTM1-205ENST00000417012 C7orf65Q6ZTY9 151 aa7.71□□□□□ -1.17
LRRTM1-205ENST00000417012 ZNF706Q9Y5V0 76 aaPredicted RBP7.71□□□□□ -1.17
LRRTM1-205ENST00000417012 LCA10Q71F78 164 aa7.71□□□□□ -1.18
LRRTM1-205ENST00000417012 SPACA4Q8TDM5 124 aa7.71□□□□□ -1.18
LRRTM1-205ENST00000417012 FBN3Q75N90 2809 aa7.7□□□□□ -1.18
LRRTM1-205ENST00000417012 A0A087WTM6 91 aa7.7□□□□□ -1.18
LRRTM1-205ENST00000417012 MRPL34Q9BQ48 92 aaKnown RBP7.68□□□□□ -1.18
LRRTM1-205ENST00000417012 A6NN06 94 aa7.67□□□□□ -1.18
LRRTM1-205ENST00000417012 WWC2-AS2Q96NR7 200 aa7.67□□□□□ -1.18
LRRTM1-205ENST00000417012 SPAG11AQ6PDA7 123 aa7.66□□□□□ -1.18
LRRTM1-205ENST00000417012 PRAC1Q96KF2 57 aa7.65□□□□□ -1.18
LRRTM1-205ENST00000417012 RTL8CO15255 209 aa7.65□□□□□ -1.18
LRRTM1-205ENST00000417012 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
LRRTM1-205ENST00000417012 DNAH6Q9C0G6 4158 aa7.63□□□□□ -1.19
LRRTM1-205ENST00000417012 HRES1P13985 223 aa7.63□□□□□ -1.19
LRRTM1-205ENST00000417012 PSORS1C2Q9UIG4 136 aa7.63□□□□□ -1.19
LRRTM1-205ENST00000417012 IGLV5-52A0A0A0MRZ9 124 aa7.62□□□□□ -1.19
LRRTM1-205ENST00000417012 DNAH8Q96JB1 4490 aa7.62□□□□□ -1.19
LRRTM1-205ENST00000417012 ANAPC11Q9NYG5 84 aa7.62□□□□□ -1.19
LRRTM1-205ENST00000417012 CDC42SE1Q9NRR8 79 aa7.62□□□□□ -1.19
LRRTM1-205ENST00000417012 A0A087X002 238 aa7.61□□□□□ -1.19
LRRTM1-205ENST00000417012 NOTCH2NLQ7Z3S9 236 aa7.61□□□□□ -1.19
LRRTM1-205ENST00000417012 PLAC8Q9NZF1 115 aa7.61□□□□□ -1.19
LRRTM1-205ENST00000417012 DNAH17Q9UFH2 4485 aa7.61□□□□□ -1.19
LRRTM1-205ENST00000417012 LY6G6CO95867 125 aa7.6□□□□□ -1.19
LRRTM1-205ENST00000417012 ZNF861PO60384 105 aa7.6□□□□□ -1.19
LRRTM1-205ENST00000417012 SPINK6Q6UWN8 80 aa7.58□□□□□ -1.2
LRRTM1-205ENST00000417012 C1orf134Q5TEV5 83 aa7.57□□□□□ -1.2
LRRTM1-205ENST00000417012 PRR26Q8N8Z3 221 aa7.57□□□□□ -1.2
LRRTM1-205ENST00000417012 LINC00313P59037 77 aa7.56□□□□□ -1.2
LRRTM1-205ENST00000417012 HYDINQ4G0P3 5121 aa7.55□□□□□ -1.2
LRRTM1-205ENST00000417012 Q5W150 140 aa7.54□□□□□ -1.2
LRRTM1-205ENST00000417012 SPINK7P58062 85 aa7.53□□□□□ -1.2
LRRTM1-205ENST00000417012 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
LRRTM1-205ENST00000417012 LINC01554Q52M75 96 aa7.52□□□□□ -1.21
LRRTM1-205ENST00000417012 CIRBP-AS1Q8TBR5 109 aa7.52□□□□□ -1.21
LRRTM1-205ENST00000417012 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
LRRTM1-205ENST00000417012 DNAH5Q8TE73 4624 aa7.51□□□□□ -1.21
LRRTM1-205ENST00000417012 DNAH11Q96DT5 4516 aa7.51□□□□□ -1.21
LRRTM1-205ENST00000417012 ALMS1Q8TCU4 4167 aa7.51□□□□□ -1.21
LRRTM1-205ENST00000417012 ACYP2P14621 99 aa7.5□□□□□ -1.21
LRRTM1-205ENST00000417012 KRTAP10-2P60368 255 aa7.49□□□□□ -1.21
LRRTM1-205ENST00000417012 IGLV7-43P04211 117 aa7.49□□□□□ -1.21
LRRTM1-205ENST00000417012 SSBP3-AS1Q7Z2R9 100 aa7.45□□□□□ -1.22
LRRTM1-205ENST00000417012 DMAC1Q96GE9 116 aa7.44□□□□□ -1.22
LRRTM1-205ENST00000417012 PKD1P98161 4303 aa7.44□□□□□ -1.22
LRRTM1-205ENST00000417012 FAM229AH3BQW9 127 aa7.43□□□□□ -1.22
LRRTM1-205ENST00000417012 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
LRRTM1-205ENST00000417012 LRP1BQ9NZR2 4599 aa7.4□□□□□ -1.23
LRRTM1-205ENST00000417012 RETNLBQ9BQ08 111 aa7.39□□□□□ -1.23
LRRTM1-205ENST00000417012 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
LRRTM1-205ENST00000417012 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
LRRTM1-205ENST00000417012 A0A1B0GU69 56 aa7.36□□□□□ -1.23
LRRTM1-205ENST00000417012 VPS13BQ7Z7G8 4022 aa7.35□□□□□ -1.23
LRRTM1-205ENST00000417012 PKHD1P08F94 4074 aa7.34□□□□□ -1.23
LRRTM1-205ENST00000417012 KRTAP13-2Q52LG2 175 aa7.3□□□□□ -1.24
LRRTM1-205ENST00000417012 Q6ZSA8 131 aa7.3□□□□□ -1.24
LRRTM1-205ENST00000417012 KRTAP16-1A8MUX0 517 aa7.28□□□□□ -1.24
LRRTM1-205ENST00000417012 CSAG1Q6PB30 78 aa7.28□□□□□ -1.24
LRRTM1-205ENST00000417012 IGKV2D-30A0A075B6S6 120 aa7.28□□□□□ -1.24
LRRTM1-205ENST00000417012 SPATA8Q6RVD6 105 aa7.27□□□□□ -1.25
LRRTM1-205ENST00000417012 PLA2G1BP04054 148 aaKnown RBP7.26□□□□□ -1.25
LRRTM1-205ENST00000417012 UQCR11O14957 56 aa7.25□□□□□ -1.25
LRRTM1-205ENST00000417012 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
LRRTM1-205ENST00000417012 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
LRRTM1-205ENST00000417012 KRTAP1-4P0C5Y4 121 aa7.2□□□□□ -1.26
LRRTM1-205ENST00000417012 KRTAP21-3Q3LHN1 58 aa7.19□□□□□ -1.26
LRRTM1-205ENST00000417012 TYMSOSQ8TAI1 123 aa7.14□□□□□ -1.27
LRRTM1-205ENST00000417012 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
LRRTM1-205ENST00000417012 SPINK1P00995 79 aa7.13□□□□□ -1.27
LRRTM1-205ENST00000417012 DYNC1H1Q14204 4646 aaKnown RBP7.11□□□□□ -1.27
LRRTM1-205ENST00000417012 Q8N1X5 172 aa7.1□□□□□ -1.27
LRRTM1-205ENST00000417012 FAT1Q14517 4588 aa7.09□□□□□ -1.27
LRRTM1-205ENST00000417012 KMT2CQ8NEZ4 4911 aaKnown RBP7.07□□□□□ -1.28
LRRTM1-205ENST00000417012 FLG2Q5D862 2391 aaPredicted RBP7.07□□□□□ -1.28
LRRTM1-205ENST00000417012 APOBP04114 4563 aaKnown RBP7.03□□□□□ -1.28
LRRTM1-205ENST00000417012 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
LRRTM1-205ENST00000417012 RYR2Q92736 4967 aa7.03□□□□□ -1.28
LRRTM1-205ENST00000417012 A0A1B0GVY2 172 aa7.01□□□□□ -1.29
LRRTM1-205ENST00000417012 ROMO1P60602 79 aa7.01□□□□□ -1.29
LRRTM1-205ENST00000417012 RPS29P62273 56 aaKnown RBP7.01□□□□□ -1.29
LRRTM1-205ENST00000417012 KRTAP10-4P60372 401 aaPredicted RBP6.95□□□□□ -1.3
LRRTM1-205ENST00000417012 H0YAA0 97 aa6.94□□□□□ -1.3
LRRTM1-205ENST00000417012 C9orf92A6NGG3 77 aa6.94□□□□□ -1.3
LRRTM1-205ENST00000417012 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
LRRTM1-205ENST00000417012 C20orf166-AS1Q96NR2 134 aa6.93□□□□□ -1.3
LRRTM1-205ENST00000417012 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
LRRTM1-205ENST00000417012 A8MUU9 505 aa6.92□□□□□ -1.3
LRRTM1-205ENST00000417012 CRIPTQ9P021 101 aa6.92□□□□□ -1.3
LRRTM1-205ENST00000417012 A0A1B0GU33 70 aa6.91□□□□□ -1.3
LRRTM1-205ENST00000417012 KRTAP3-1Q9BYR8 98 aa6.88□□□□□ -1.31
LRRTM1-205ENST00000417012 H1FX-AS1Q4G0G2 97 aa6.87□□□□□ -1.31
LRRTM1-205ENST00000417012 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
LRRTM1-205ENST00000417012 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms