RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 V9GYY9 64 aa5.85□□□□□ -1.47
LINC00494-201ENST00000416742 MRPL34Q9BQ48 92 aaKnown RBP5.84□□□□□ -1.47
LINC00494-201ENST00000416742 ALMS1Q8TCU4 4167 aa5.84□□□□□ -1.47
LINC00494-201ENST00000416742 PCOTHQ58A44 107 aa5.84□□□□□ -1.47
LINC00494-201ENST00000416742 LRP1BQ9NZR2 4599 aa5.84□□□□□ -1.48
LINC00494-201ENST00000416742 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
LINC00494-201ENST00000416742 Q6ZSA8 131 aa5.83□□□□□ -1.48
LINC00494-201ENST00000416742 ASB16-AS1Q495Z4 193 aa5.82□□□□□ -1.48
LINC00494-201ENST00000416742 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
LINC00494-201ENST00000416742 KRTAP13-2Q52LG2 175 aa5.81□□□□□ -1.48
LINC00494-201ENST00000416742 CD164Q04900 197 aa5.81□□□□□ -1.48
LINC00494-201ENST00000416742 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
LINC00494-201ENST00000416742 PKD1P98161 4303 aa5.8□□□□□ -1.48
LINC00494-201ENST00000416742 LINC00336Q6ZUF6 198 aa5.79□□□□□ -1.48
LINC00494-201ENST00000416742 KRTAP21-3Q3LHN1 58 aa5.78□□□□□ -1.48
LINC00494-201ENST00000416742 SPANXA2-OT1Q8N9U9 137 aa5.78□□□□□ -1.48
LINC00494-201ENST00000416742 PLA2G1BP04054 148 aaKnown RBP5.76□□□□□ -1.49
LINC00494-201ENST00000416742 H3BS24 57 aa5.75□□□□□ -1.49
LINC00494-201ENST00000416742 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
LINC00494-201ENST00000416742 LINC00313P59037 77 aa5.75□□□□□ -1.49
LINC00494-201ENST00000416742 RETNLBQ9BQ08 111 aa5.75□□□□□ -1.49
LINC00494-201ENST00000416742 C1orf195Q5TG92 126 aa5.74□□□□□ -1.49
LINC00494-201ENST00000416742 Q5W150 140 aa5.74□□□□□ -1.49
LINC00494-201ENST00000416742 SMR3BP02814 79 aaPredicted RBP5.74□□□□□ -1.49
LINC00494-201ENST00000416742 VPS13BQ7Z7G8 4022 aa5.73□□□□□ -1.49
LINC00494-201ENST00000416742 IGLV7-46A0A075B6I9 117 aa5.73□□□□□ -1.49
LINC00494-201ENST00000416742 C8orf87E5RJ46 101 aa5.73□□□□□ -1.49
LINC00494-201ENST00000416742 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
LINC00494-201ENST00000416742 PSPHP1O15172 72 aa5.73□□□□□ -1.49
LINC00494-201ENST00000416742 SACSQ9NZJ4 4579 aa5.72□□□□□ -1.49
LINC00494-201ENST00000416742 BRK1Q8WUW1 75 aa5.71□□□□□ -1.49
LINC00494-201ENST00000416742 COA5Q86WW8 74 aa5.7□□□□□ -1.5
LINC00494-201ENST00000416742 LIMD2Q9BT23 127 aa5.7□□□□□ -1.5
LINC00494-201ENST00000416742 Q1T7F1 81 aa5.7□□□□□ -1.5
LINC00494-201ENST00000416742 LOC101927531A0A1B0GV80 90 aa5.69□□□□□ -1.5
LINC00494-201ENST00000416742 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
LINC00494-201ENST00000416742 PKHD1P08F94 4074 aa5.68□□□□□ -1.5
LINC00494-201ENST00000416742 A8MUN3 132 aa5.67□□□□□ -1.5
LINC00494-201ENST00000416742 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
LINC00494-201ENST00000416742 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
LINC00494-201ENST00000416742 DYNC1H1Q14204 4646 aaKnown RBP5.66□□□□□ -1.5
LINC00494-201ENST00000416742 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
LINC00494-201ENST00000416742 FAM229AH3BQW9 127 aa5.65□□□□□ -1.51
LINC00494-201ENST00000416742 SPINK1P00995 79 aa5.65□□□□□ -1.51
LINC00494-201ENST00000416742 LINC00304Q8N9R0 145 aa5.64□□□□□ -1.51
LINC00494-201ENST00000416742 HRES1P13985 223 aa5.63□□□□□ -1.51
LINC00494-201ENST00000416742 PRR15LQ9BU68 103 aa5.63□□□□□ -1.51
LINC00494-201ENST00000416742 FAT1Q14517 4588 aa5.62□□□□□ -1.51
LINC00494-201ENST00000416742 KRTAP16-1A8MUX0 517 aa5.61□□□□□ -1.51
LINC00494-201ENST00000416742 SPAG11AQ6PDA7 123 aa5.61□□□□□ -1.51
LINC00494-201ENST00000416742 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
LINC00494-201ENST00000416742 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
LINC00494-201ENST00000416742 A0A1B0GVY2 172 aa5.6□□□□□ -1.51
LINC00494-201ENST00000416742 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
LINC00494-201ENST00000416742 Q5VV11 94 aa5.58□□□□□ -1.52
LINC00494-201ENST00000416742 ACYP2P14621 99 aa5.57□□□□□ -1.52
LINC00494-201ENST00000416742 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
LINC00494-201ENST00000416742 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
LINC00494-201ENST00000416742 RYR2Q92736 4967 aa5.53□□□□□ -1.52
LINC00494-201ENST00000416742 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
LINC00494-201ENST00000416742 A8MU10 97 aa5.52□□□□□ -1.53
LINC00494-201ENST00000416742 KRTAP10-4P60372 401 aaPredicted RBP5.52□□□□□ -1.53
LINC00494-201ENST00000416742 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
LINC00494-201ENST00000416742 A6NED7 52 aa5.52□□□□□ -1.53
LINC00494-201ENST00000416742 DMAC1Q96GE9 116 aa5.52□□□□□ -1.53
LINC00494-201ENST00000416742 RPS29P62273 56 aaKnown RBP5.51□□□□□ -1.53
LINC00494-201ENST00000416742 KMT2CQ8NEZ4 4911 aaKnown RBP5.5□□□□□ -1.53
LINC00494-201ENST00000416742 Q75L30 129 aa5.49□□□□□ -1.53
LINC00494-201ENST00000416742 C7orf65Q6ZTY9 151 aa5.49□□□□□ -1.53
LINC00494-201ENST00000416742 Q8N1X5 172 aa5.46□□□□□ -1.54
LINC00494-201ENST00000416742 SPTSSBQ8NFR3 76 aa5.45□□□□□ -1.54
LINC00494-201ENST00000416742 LCA10Q71F78 164 aa5.44□□□□□ -1.54
LINC00494-201ENST00000416742 SPINK7P58062 85 aa5.44□□□□□ -1.54
LINC00494-201ENST00000416742 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
LINC00494-201ENST00000416742 PKHD1L1Q86WI1 4243 aa5.43□□□□□ -1.54
LINC00494-201ENST00000416742 FLG2Q5D862 2391 aaPredicted RBP5.42□□□□□ -1.54
LINC00494-201ENST00000416742 DMBT1Q9UGM3 2413 aaPredicted RBP5.42□□□□□ -1.54
LINC00494-201ENST00000416742 A8MUU9 505 aa5.41□□□□□ -1.54
LINC00494-201ENST00000416742 A0A1B0GU69 56 aa5.4□□□□□ -1.54
LINC00494-201ENST00000416742 Q5VSD8 79 aa5.4□□□□□ -1.54
LINC00494-201ENST00000416742 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.54
LINC00494-201ENST00000416742 LRP1Q07954 4544 aaKnown RBP5.39□□□□□ -1.55
LINC00494-201ENST00000416742 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
LINC00494-201ENST00000416742 ATP11AUNQ6ZP68 121 aa5.35□□□□□ -1.55
LINC00494-201ENST00000416742 HSPG2P98160 4391 aa5.34□□□□□ -1.55
LINC00494-201ENST00000416742 KRTAP10-8P60410 259 aa5.34□□□□□ -1.55
LINC00494-201ENST00000416742 RBM12B-AS1Q9P1G2 102 aa5.34□□□□□ -1.56
LINC00494-201ENST00000416742 RYR3Q15413 4870 aa5.33□□□□□ -1.56
LINC00494-201ENST00000416742 FAT3Q8TDW7 4589 aa5.32□□□□□ -1.56
LINC00494-201ENST00000416742 J3QL48 77 aa5.3□□□□□ -1.56
LINC00494-201ENST00000416742 TNXBP22105 4242 aa5.3□□□□□ -1.56
LINC00494-201ENST00000416742 RYR1P21817 5038 aa5.3□□□□□ -1.56
LINC00494-201ENST00000416742 KRTAP17-1Q9BYP8 105 aa5.29□□□□□ -1.56
LINC00494-201ENST00000416742 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
LINC00494-201ENST00000416742 KIAA1109Q2LD37 5005 aa5.28□□□□□ -1.56
LINC00494-201ENST00000416742 UQCR11O14957 56 aa5.27□□□□□ -1.57
LINC00494-201ENST00000416742 MYCBP2O75592 4640 aa5.26□□□□□ -1.57
LINC00494-201ENST00000416742 MIR22HGQ0VDD5 57 aa5.26□□□□□ -1.57
LINC00494-201ENST00000416742 A6NN06 94 aa5.24□□□□□ -1.57
LINC00494-201ENST00000416742 COX6B2Q6YFQ2 88 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms