RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 A0A1W2PNM2 257 aa7.29□□□□□ -1.24
PAF1-202ENST00000416728 FAM236DA0A1B0GTK5 79 aa7.28□□□□□ -1.24
PAF1-202ENST00000416728 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
PAF1-202ENST00000416728 K7ERJ3 54 aa7.28□□□□□ -1.24
PAF1-202ENST00000416728 FAM236CP0DP71 79 aa7.28□□□□□ -1.24
PAF1-202ENST00000416728 LINC00313P59037 77 aa7.28□□□□□ -1.24
PAF1-202ENST00000416728 IGKV4-1P06312 121 aa7.26□□□□□ -1.25
PAF1-202ENST00000416728 PRO1854Q9UHT4 67 aa7.26□□□□□ -1.25
PAF1-202ENST00000416728 USH2AO75445 5202 aa7.25□□□□□ -1.25
PAF1-202ENST00000416728 KRTAP9-7A8MTY7 169 aa7.25□□□□□ -1.25
PAF1-202ENST00000416728 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
PAF1-202ENST00000416728 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
PAF1-202ENST00000416728 ANKRD29Q8N6D5 301 aa7.24□□□□□ -1.25
PAF1-202ENST00000416728 TRBV7-4A0A0J9YYF1 115 aa7.23□□□□□ -1.25
PAF1-202ENST00000416728 MT2AP02795 61 aa7.23□□□□□ -1.25
PAF1-202ENST00000416728 RBM12B-AS1Q9P1G2 102 aa7.23□□□□□ -1.25
PAF1-202ENST00000416728 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
PAF1-202ENST00000416728 TRIAP1O43715 76 aa7.22□□□□□ -1.25
PAF1-202ENST00000416728 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
PAF1-202ENST00000416728 DNAL4O96015 105 aa7.21□□□□□ -1.25
PAF1-202ENST00000416728 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
PAF1-202ENST00000416728 ORMDL1Q9P0S3 153 aa7.2□□□□□ -1.26
PAF1-202ENST00000416728 H3BQ85 93 aa7.2□□□□□ -1.26
PAF1-202ENST00000416728 HRES1P13985 223 aa7.2□□□□□ -1.26
PAF1-202ENST00000416728 DEFB116Q30KQ4 102 aa7.2□□□□□ -1.26
PAF1-202ENST00000416728 MPLKIPQ8TAP9 179 aa7.2□□□□□ -1.26
PAF1-202ENST00000416728 C5orf47Q569G3 176 aa7.19□□□□□ -1.26
PAF1-202ENST00000416728 IGHV6-1A0A0B4J1U7 121 aa7.18□□□□□ -1.26
PAF1-202ENST00000416728 TRACP01848 142 aa7.18□□□□□ -1.26
PAF1-202ENST00000416728 MT1FP04733 61 aa7.18□□□□□ -1.26
PAF1-202ENST00000416728 LINC00472Q9H8W2 130 aa7.18□□□□□ -1.26
PAF1-202ENST00000416728 TMEM256-PLSCR3K7ERE1 68 aa7.17□□□□□ -1.26
PAF1-202ENST00000416728 CCKP06307 115 aa7.17□□□□□ -1.26
PAF1-202ENST00000416728 CCDC179H3BU77 68 aa7.16□□□□□ -1.26
PAF1-202ENST00000416728 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
PAF1-202ENST00000416728 PSMB2P49721 201 aa7.16□□□□□ -1.26
PAF1-202ENST00000416728 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
PAF1-202ENST00000416728 FAM240AA0A1B0GVK7 77 aa7.14□□□□□ -1.27
PAF1-202ENST00000416728 LCE2BO14633 110 aa7.14□□□□□ -1.27
PAF1-202ENST00000416728 COX6CP09669 75 aa7.13□□□□□ -1.27
PAF1-202ENST00000416728 C8orf87E5RJ46 101 aa7.12□□□□□ -1.27
PAF1-202ENST00000416728 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
PAF1-202ENST00000416728 IMUPQ9GZP8 106 aa7.12□□□□□ -1.27
PAF1-202ENST00000416728 FCGBPQ9Y6R7 5405 aaPredicted RBP7.12□□□□□ -1.27
PAF1-202ENST00000416728 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
PAF1-202ENST00000416728 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
PAF1-202ENST00000416728 J3KT08 172 aa7.08□□□□□ -1.28
PAF1-202ENST00000416728 H3BT86 120 aa7.08□□□□□ -1.28
PAF1-202ENST00000416728 RPS28P62857 69 aaKnown RBP7.08□□□□□ -1.28
PAF1-202ENST00000416728 ATXN8Q156A1 80 aa7.08□□□□□ -1.28
PAF1-202ENST00000416728 ZCCHC13Q8WW36 166 aaKnown RBP7.07□□□□□ -1.28
PAF1-202ENST00000416728 ACYP1P07311 99 aa7.06□□□□□ -1.28
PAF1-202ENST00000416728 RBM3P98179 157 aaKnown RBP7.06□□□□□ -1.28
PAF1-202ENST00000416728 DSCR8Q96T75 97 aa7.06□□□□□ -1.28
PAF1-202ENST00000416728 C9JAW5 83 aa7.05□□□□□ -1.28
PAF1-202ENST00000416728 UQCRQO14949 82 aa7.05□□□□□ -1.28
PAF1-202ENST00000416728 SPINK7P58062 85 aa7.05□□□□□ -1.28
PAF1-202ENST00000416728 NDUFB1O75438 58 aa7□□□□□ -1.29
PAF1-202ENST00000416728 Q8N9P0 234 aaPredicted RBP6.99□□□□□ -1.29
PAF1-202ENST00000416728 Q6ZQT0 140 aa6.98□□□□□ -1.29
PAF1-202ENST00000416728 LINC00846Q9NV44 126 aa6.98□□□□□ -1.29
PAF1-202ENST00000416728 LINC00643Q86TS7 51 aa6.97□□□□□ -1.29
PAF1-202ENST00000416728 WFDC13Q8IUB5 93 aa6.97□□□□□ -1.29
PAF1-202ENST00000416728 A8MWP4 228 aa6.96□□□□□ -1.29
PAF1-202ENST00000416728 BAALC-AS2P0C853 105 aa6.96□□□□□ -1.29
PAF1-202ENST00000416728 COX7CP15954 63 aa6.96□□□□□ -1.29
PAF1-202ENST00000416728 MACF1Q9UPN3 7388 aaKnown RBP6.96□□□□□ -1.3
PAF1-202ENST00000416728 FAM236AA0A1B0GUQ0 79 aa6.95□□□□□ -1.3
PAF1-202ENST00000416728 FAM236BA0A1B0GV22 79 aa6.95□□□□□ -1.3
PAF1-202ENST00000416728 TMEM258P61165 79 aa6.95□□□□□ -1.3
PAF1-202ENST00000416728 ATOX1O00244 68 aa6.95□□□□□ -1.3
PAF1-202ENST00000416728 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
PAF1-202ENST00000416728 HIST1H4AP62805 103 aaKnown RBP6.93□□□□□ -1.3
PAF1-202ENST00000416728 KRTAP19-6Q3LI70 58 aa6.93□□□□□ -1.3
PAF1-202ENST00000416728 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
PAF1-202ENST00000416728 IGKV3D-7A0A0C4DH55 119 aa6.9□□□□□ -1.31
PAF1-202ENST00000416728 A0A1B0GW54 56 aa6.9□□□□□ -1.31
PAF1-202ENST00000416728 JMJD7-PLA2G4BH0Y9G9 81 aa6.9□□□□□ -1.31
PAF1-202ENST00000416728 Q6ZVQ6 151 aa6.89□□□□□ -1.31
PAF1-202ENST00000416728 LOC110117498A0A087WWA1 95 aa6.87□□□□□ -1.31
PAF1-202ENST00000416728 PDE6GP18545 87 aa6.86□□□□□ -1.31
PAF1-202ENST00000416728 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
PAF1-202ENST00000416728 SERP2Q8N6R1 65 aa6.83□□□□□ -1.32
PAF1-202ENST00000416728 H1FX-AS1Q4G0G2 97 aa6.82□□□□□ -1.32
PAF1-202ENST00000416728 C14orf132Q9NPU4 83 aa6.82□□□□□ -1.32
PAF1-202ENST00000416728 NREPQ16612 68 aa6.82□□□□□ -1.32
PAF1-202ENST00000416728 TMEM254Q8TBM7 123 aa6.82□□□□□ -1.32
PAF1-202ENST00000416728 MRPL34Q9BQ48 92 aaKnown RBP6.82□□□□□ -1.32
PAF1-202ENST00000416728 MMP24-AS1A0A0U1RRL7 71 aa6.81□□□□□ -1.32
PAF1-202ENST00000416728 PRO0628Q9UI54 55 aa6.79□□□□□ -1.32
PAF1-202ENST00000416728 NDUFS5O43920 106 aa6.78□□□□□ -1.32
PAF1-202ENST00000416728 hDV103S1A0JD37 113 aa6.77□□□□□ -1.33
PAF1-202ENST00000416728 ATP5EP2Q5VTU8 51 aa6.76□□□□□ -1.33
PAF1-202ENST00000416728 IGKV2D-30A0A075B6S6 120 aa6.74□□□□□ -1.33
PAF1-202ENST00000416728 K7EQZ3 153 aa6.74□□□□□ -1.33
PAF1-202ENST00000416728 IGKV2-30P06310 120 aa6.74□□□□□ -1.33
PAF1-202ENST00000416728 KRTAP6-3Q3LI67 103 aa6.73□□□□□ -1.33
PAF1-202ENST00000416728 SERP1Q9Y6X1 66 aa6.73□□□□□ -1.33
PAF1-202ENST00000416728 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
PAF1-202ENST00000416728 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms