RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 IGFL1Q6UW32 110 aa3.6□□□□□ -1.83
CLIP4-205ENST00000415891 NOTCH3Q9UM47 2321 aa3.6□□□□□ -1.83
CLIP4-205ENST00000415891 NF1P21359 2839 aa3.6□□□□□ -1.83
CLIP4-205ENST00000415891 INE1O15225 51 aa3.6□□□□□ -1.83
CLIP4-205ENST00000415891 KRTAP10-8P60410 259 aa3.6□□□□□ -1.83
CLIP4-205ENST00000415891 KRTAP17-1Q9BYP8 105 aa3.6□□□□□ -1.83
CLIP4-205ENST00000415891 CELSR2Q9HCU4 2923 aa3.59□□□□□ -1.83
CLIP4-205ENST00000415891 CRYBG3Q68DQ2 2970 aa3.59□□□□□ -1.83
CLIP4-205ENST00000415891 CELSR1Q9NYQ6 3014 aa3.59□□□□□ -1.83
CLIP4-205ENST00000415891 HIVEP1P15822 2718 aa3.59□□□□□ -1.83
CLIP4-205ENST00000415891 AKAP9Q99996 3911 aa3.59□□□□□ -1.83
CLIP4-205ENST00000415891 MRPL34Q9BQ48 92 aaKnown RBP3.58□□□□□ -1.84
CLIP4-205ENST00000415891 PDZD2O15018 2839 aa3.58□□□□□ -1.84
CLIP4-205ENST00000415891 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
CLIP4-205ENST00000415891 BRD3OSQ6XYD6 125 aa3.58□□□□□ -1.84
CLIP4-205ENST00000415891 NOP10Q9NPE3 64 aaKnown RBP3.58□□□□□ -1.84
CLIP4-205ENST00000415891 APCP25054 2843 aa3.57□□□□□ -1.84
CLIP4-205ENST00000415891 ANKHD1Q8IWZ3 2542 aaKnown RBP3.56□□□□□ -1.84
CLIP4-205ENST00000415891 CCDC168Q8NDH2 2452 aa3.56□□□□□ -1.84
CLIP4-205ENST00000415891 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
CLIP4-205ENST00000415891 Q6ZRN7 208 aaPredicted RBP3.55□□□□□ -1.84
CLIP4-205ENST00000415891 FN1P02751 2386 aaKnown RBP3.54□□□□□ -1.84
CLIP4-205ENST00000415891 DEFB109BQ30KR1 87 aa3.54□□□□□ -1.84
CLIP4-205ENST00000415891 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
CLIP4-205ENST00000415891 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
CLIP4-205ENST00000415891 LELP1Q5T871 98 aa3.53□□□□□ -1.84
CLIP4-205ENST00000415891 DEFB136Q30KP8 78 aa3.53□□□□□ -1.85
CLIP4-205ENST00000415891 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
CLIP4-205ENST00000415891 C10orf99Q6UWK7 81 aa3.51□□□□□ -1.85
CLIP4-205ENST00000415891 DEFB130BP0DP73 79 aa3.5□□□□□ -1.85
CLIP4-205ENST00000415891 DEFB130AP0DP74 79 aa3.5□□□□□ -1.85
CLIP4-205ENST00000415891 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
CLIP4-205ENST00000415891 H1FX-AS1Q4G0G2 97 aa3.5□□□□□ -1.85
CLIP4-205ENST00000415891 TENM2Q9NT68 2774 aa3.49□□□□□ -1.85
CLIP4-205ENST00000415891 NIPBLQ6KC79 2804 aaeCLIP3.49□□□□□ -1.85
CLIP4-205ENST00000415891 H3BUX3 64 aa3.49□□□□□ -1.85
CLIP4-205ENST00000415891 SPRR1AP35321 89 aa3.49□□□□□ -1.85
CLIP4-205ENST00000415891 CSPG4Q6UVK1 2322 aa3.48□□□□□ -1.85
CLIP4-205ENST00000415891 CSMD2Q7Z408 3487 aa3.48□□□□□ -1.85
CLIP4-205ENST00000415891 A0A096LPF7 62 aa3.47□□□□□ -1.85
CLIP4-205ENST00000415891 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
CLIP4-205ENST00000415891 ACANP16112 2415 aa3.47□□□□□ -1.85
CLIP4-205ENST00000415891 HRNRQ86YZ3 2850 aaPredicted RBP3.46□□□□□ -1.85
CLIP4-205ENST00000415891 NSD1Q96L73 2696 aaPredicted RBP3.46□□□□□ -1.86
CLIP4-205ENST00000415891 STAB1Q9NY15 2570 aa3.44□□□□□ -1.86
CLIP4-205ENST00000415891 JMJD1CQ15652 2540 aa3.44□□□□□ -1.86
CLIP4-205ENST00000415891 CUBNO60494 3623 aa3.44□□□□□ -1.86
CLIP4-205ENST00000415891 ATRQ13535 2644 aa3.44□□□□□ -1.86
CLIP4-205ENST00000415891 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
CLIP4-205ENST00000415891 RPL37P61927 97 aaKnown RBP3.44□□□□□ -1.86
CLIP4-205ENST00000415891 UBE2DNLQ8IWF7 75 aa3.44□□□□□ -1.86
CLIP4-205ENST00000415891 COL6A5A8TX70 2615 aa3.43□□□□□ -1.86
CLIP4-205ENST00000415891 FLNAP21333 2647 aaKnown RBP3.43□□□□□ -1.86
CLIP4-205ENST00000415891 NBEAL1Q6ZS30 2694 aa3.43□□□□□ -1.86
CLIP4-205ENST00000415891 PRO0255Q9UI72 69 aa3.43□□□□□ -1.86
CLIP4-205ENST00000415891 ZNF469Q96JG9 3925 aaPredicted RBP3.43□□□□□ -1.86
CLIP4-205ENST00000415891 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
CLIP4-205ENST00000415891 K7EIL1 84 aa3.42□□□□□ -1.86
CLIP4-205ENST00000415891 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
CLIP4-205ENST00000415891 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
CLIP4-205ENST00000415891 KRTAP4-5Q9BYR2 181 aa3.42□□□□□ -1.86
CLIP4-205ENST00000415891 TLN2Q9Y4G6 2542 aa3.42□□□□□ -1.86
CLIP4-205ENST00000415891 FBN1P35555 2871 aaKnown RBP3.41□□□□□ -1.86
CLIP4-205ENST00000415891 VPS13CQ709C8 3753 aa3.4□□□□□ -1.87
CLIP4-205ENST00000415891 KRTAP10-9P60411 292 aa3.4□□□□□ -1.87
CLIP4-205ENST00000415891 KRTAP7-1Q8IUC3 87 aa3.38□□□□□ -1.87
CLIP4-205ENST00000415891 ANK2Q01484 3957 aa3.37□□□□□ -1.87
CLIP4-205ENST00000415891 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
CLIP4-205ENST00000415891 NBEAL2Q6ZNJ1 2754 aa3.36□□□□□ -1.87
CLIP4-205ENST00000415891 MXRA5Q9NR99 2828 aa3.36□□□□□ -1.87
CLIP4-205ENST00000415891 IGKV2-30P06310 120 aa3.36□□□□□ -1.87
CLIP4-205ENST00000415891 CSMD3Q7Z407 3707 aa3.34□□□□□ -1.87
CLIP4-205ENST00000415891 HIVEP2P31629 2446 aa3.34□□□□□ -1.87
CLIP4-205ENST00000415891 SPRR1BP22528 89 aa3.34□□□□□ -1.87
CLIP4-205ENST00000415891 PRLHP81277 87 aa3.34□□□□□ -1.87
CLIP4-205ENST00000415891 SONP18583 2426 aaKnown RBP3.34□□□□□ -1.88
CLIP4-205ENST00000415891 ANK3Q12955 4377 aaKnown RBP3.34□□□□□ -1.88
CLIP4-205ENST00000415891 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
CLIP4-205ENST00000415891 KRTAP9-3Q9BYQ3 159 aa3.33□□□□□ -1.88
CLIP4-205ENST00000415891 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
CLIP4-205ENST00000415891 KRTAP10-2P60368 255 aa3.31□□□□□ -1.88
CLIP4-205ENST00000415891 SMR3AQ99954 134 aa3.31□□□□□ -1.88
CLIP4-205ENST00000415891 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
CLIP4-205ENST00000415891 ZANQ9Y493 2812 aa3.3□□□□□ -1.88
CLIP4-205ENST00000415891 MAPK1IP1LQ8NDC0 245 aa3.28□□□□□ -1.88
CLIP4-205ENST00000415891 A0A096LNI7 61 aa3.27□□□□□ -1.89
CLIP4-205ENST00000415891 SPINK1P00995 79 aa3.27□□□□□ -1.89
CLIP4-205ENST00000415891 TGP01266 2768 aa3.26□□□□□ -1.89
CLIP4-205ENST00000415891 MGAM2Q2M2H8 2515 aa3.26□□□□□ -1.89
CLIP4-205ENST00000415891 PKD1L1Q8TDX9 2849 aa3.25□□□□□ -1.89
CLIP4-205ENST00000415891 VWFP04275 2813 aa3.25□□□□□ -1.89
CLIP4-205ENST00000415891 MEGF8Q7Z7M0 2845 aa3.25□□□□□ -1.89
CLIP4-205ENST00000415891 NOTCH1P46531 2555 aa3.25□□□□□ -1.89
CLIP4-205ENST00000415891 APLNQ9ULZ1 77 aa3.24□□□□□ -1.89
CLIP4-205ENST00000415891 DEFB4AO15263 64 aa3.24□□□□□ -1.89
CLIP4-205ENST00000415891 KRTAP1-1Q07627 177 aa3.23□□□□□ -1.89
CLIP4-205ENST00000415891 HTN3P15516 51 aa3.22□□□□□ -1.89
CLIP4-205ENST00000415891 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
CLIP4-205ENST00000415891 S4R3F8 94 aa3.22□□□□□ -1.89
CLIP4-205ENST00000415891 PRKDCP78527 4128 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms