RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 Q96NJ1 140 aa8.07□□□□□ -1.12
SNHG17-202ENST00000414142 SMR3BP02814 79 aaPredicted RBP8.06□□□□□ -1.12
SNHG17-202ENST00000414142 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
SNHG17-202ENST00000414142 DYNC1H1Q14204 4646 aaKnown RBP8.05□□□□□ -1.12
SNHG17-202ENST00000414142 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
SNHG17-202ENST00000414142 KRTAP1-4P0C5Y4 121 aa8.04□□□□□ -1.12
SNHG17-202ENST00000414142 KMT2CQ8NEZ4 4911 aaKnown RBP8.03□□□□□ -1.12
SNHG17-202ENST00000414142 MP68P56378 58 aa8.03□□□□□ -1.12
SNHG17-202ENST00000414142 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
SNHG17-202ENST00000414142 SPINK6Q6UWN8 80 aa8.02□□□□□ -1.13
SNHG17-202ENST00000414142 CDK2AP2O75956 126 aa8.02□□□□□ -1.13
SNHG17-202ENST00000414142 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
SNHG17-202ENST00000414142 H3BS24 57 aa8□□□□□ -1.13
SNHG17-202ENST00000414142 H3BPC8 53 aa7.99□□□□□ -1.13
SNHG17-202ENST00000414142 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
SNHG17-202ENST00000414142 IGHV6-1A0A0B4J1U7 121 aa7.97□□□□□ -1.13
SNHG17-202ENST00000414142 A0A1B0GVX0 72 aa7.97□□□□□ -1.13
SNHG17-202ENST00000414142 TYMSOSQ8TAI1 123 aa7.97□□□□□ -1.13
SNHG17-202ENST00000414142 MPLKIPQ8TAP9 179 aa7.97□□□□□ -1.13
SNHG17-202ENST00000414142 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.13
SNHG17-202ENST00000414142 Q1T7F1 81 aa7.96□□□□□ -1.14
SNHG17-202ENST00000414142 C8orf17Q9NRJ1 99 aa7.96□□□□□ -1.14
SNHG17-202ENST00000414142 H0Y9P7 68 aa7.95□□□□□ -1.14
SNHG17-202ENST00000414142 LINC00208Q96KT6 92 aa7.95□□□□□ -1.14
SNHG17-202ENST00000414142 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
SNHG17-202ENST00000414142 TP53AIP1Q9HCN2 124 aa7.94□□□□□ -1.14
SNHG17-202ENST00000414142 TRAV22A0A0B4J277 110 aa7.93□□□□□ -1.14
SNHG17-202ENST00000414142 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
SNHG17-202ENST00000414142 KRTAP10-4P60372 401 aaPredicted RBP7.91□□□□□ -1.14
SNHG17-202ENST00000414142 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
SNHG17-202ENST00000414142 C1orf64Q8NEQ6 169 aa7.9□□□□□ -1.15
SNHG17-202ENST00000414142 CYP4F30PQ9H0H9 118 aa7.89□□□□□ -1.15
SNHG17-202ENST00000414142 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
SNHG17-202ENST00000414142 SPINK1P00995 79 aa7.87□□□□□ -1.15
SNHG17-202ENST00000414142 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
SNHG17-202ENST00000414142 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
SNHG17-202ENST00000414142 LINC00304Q8N9R0 145 aa7.86□□□□□ -1.15
SNHG17-202ENST00000414142 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
SNHG17-202ENST00000414142 NDUFS5O43920 106 aa7.85□□□□□ -1.15
SNHG17-202ENST00000414142 FAT1Q14517 4588 aa7.85□□□□□ -1.15
SNHG17-202ENST00000414142 RYR3Q15413 4870 aa7.84□□□□□ -1.15
SNHG17-202ENST00000414142 C8orf87E5RJ46 101 aa7.83□□□□□ -1.16
SNHG17-202ENST00000414142 SPAG11AQ6PDA7 123 aa7.82□□□□□ -1.16
SNHG17-202ENST00000414142 LINC00313P59037 77 aa7.81□□□□□ -1.16
SNHG17-202ENST00000414142 PRR4Q16378 134 aa7.81□□□□□ -1.16
SNHG17-202ENST00000414142 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
SNHG17-202ENST00000414142 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
SNHG17-202ENST00000414142 Q5VSD8 79 aa7.77□□□□□ -1.17
SNHG17-202ENST00000414142 IGLV7-46A0A075B6I9 117 aa7.76□□□□□ -1.17
SNHG17-202ENST00000414142 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
SNHG17-202ENST00000414142 LOC101927531A0A1B0GV80 90 aa7.72□□□□□ -1.17
SNHG17-202ENST00000414142 PCOTHQ58A44 107 aa7.72□□□□□ -1.17
SNHG17-202ENST00000414142 PSPHP1O15172 72 aa7.71□□□□□ -1.18
SNHG17-202ENST00000414142 HSPG2P98160 4391 aa7.71□□□□□ -1.18
SNHG17-202ENST00000414142 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
SNHG17-202ENST00000414142 Q5W150 140 aa7.69□□□□□ -1.18
SNHG17-202ENST00000414142 Q8N9P0 234 aaPredicted RBP7.69□□□□□ -1.18
SNHG17-202ENST00000414142 RYR1P21817 5038 aa7.69□□□□□ -1.18
SNHG17-202ENST00000414142 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
SNHG17-202ENST00000414142 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
SNHG17-202ENST00000414142 Q5VV11 94 aa7.67□□□□□ -1.18
SNHG17-202ENST00000414142 A8MUN3 132 aa7.66□□□□□ -1.18
SNHG17-202ENST00000414142 ATP11AUNQ6ZP68 121 aa7.64□□□□□ -1.19
SNHG17-202ENST00000414142 RETNLBQ9BQ08 111 aa7.64□□□□□ -1.19
SNHG17-202ENST00000414142 KRTAP17-1Q9BYP8 105 aa7.64□□□□□ -1.19
SNHG17-202ENST00000414142 COA5Q86WW8 74 aa7.63□□□□□ -1.19
SNHG17-202ENST00000414142 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
SNHG17-202ENST00000414142 Q8N1X5 172 aa7.63□□□□□ -1.19
SNHG17-202ENST00000414142 CHKB-CPT1BH3BT56 60 aa7.6□□□□□ -1.19
SNHG17-202ENST00000414142 Q75L30 129 aa7.6□□□□□ -1.19
SNHG17-202ENST00000414142 FLG2Q5D862 2391 aaPredicted RBP7.59□□□□□ -1.19
SNHG17-202ENST00000414142 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
SNHG17-202ENST00000414142 KIAA1109Q2LD37 5005 aa7.57□□□□□ -1.2
SNHG17-202ENST00000414142 LRP1Q07954 4544 aaKnown RBP7.56□□□□□ -1.2
SNHG17-202ENST00000414142 EPPK1P58107 5090 aaKnown RBP7.56□□□□□ -1.2
SNHG17-202ENST00000414142 TNXBP22105 4242 aa7.56□□□□□ -1.2
SNHG17-202ENST00000414142 IGKV2-30P06310 120 aa7.55□□□□□ -1.2
SNHG17-202ENST00000414142 HRES1P13985 223 aa7.54□□□□□ -1.2
SNHG17-202ENST00000414142 PRR15LQ9BU68 103 aa7.54□□□□□ -1.2
SNHG17-202ENST00000414142 A6NN06 94 aa7.52□□□□□ -1.2
SNHG17-202ENST00000414142 CDC42SE1Q9NRR8 79 aa7.52□□□□□ -1.2
SNHG17-202ENST00000414142 ACYP2P14621 99 aa7.51□□□□□ -1.21
SNHG17-202ENST00000414142 FAT3Q8TDW7 4589 aa7.5□□□□□ -1.21
SNHG17-202ENST00000414142 A0A0A0MQY5 61 aa7.49□□□□□ -1.21
SNHG17-202ENST00000414142 A6NED7 52 aa7.49□□□□□ -1.21
SNHG17-202ENST00000414142 LCA10Q71F78 164 aa7.49□□□□□ -1.21
SNHG17-202ENST00000414142 SPTSSBQ8NFR3 76 aa7.49□□□□□ -1.21
SNHG17-202ENST00000414142 DMBT1Q9UGM3 2413 aaPredicted RBP7.49□□□□□ -1.21
SNHG17-202ENST00000414142 IGKV2D-30A0A075B6S6 120 aa7.49□□□□□ -1.21
SNHG17-202ENST00000414142 A8MU10 97 aa7.49□□□□□ -1.21
SNHG17-202ENST00000414142 C7orf65Q6ZTY9 151 aa7.48□□□□□ -1.21
SNHG17-202ENST00000414142 C20orf166-AS1Q96NR2 134 aa7.48□□□□□ -1.21
SNHG17-202ENST00000414142 A8MUU9 505 aa7.48□□□□□ -1.21
SNHG17-202ENST00000414142 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
SNHG17-202ENST00000414142 MT1HL1P0DM35 61 aa7.47□□□□□ -1.21
SNHG17-202ENST00000414142 LINC01558Q9Y6Z2 57 aa7.45□□□□□ -1.22
SNHG17-202ENST00000414142 KRTAP4-5Q9BYR2 181 aa7.4□□□□□ -1.22
SNHG17-202ENST00000414142 MYCBP2O75592 4640 aa7.4□□□□□ -1.22
SNHG17-202ENST00000414142 SPINK7P58062 85 aa7.3□□□□□ -1.24
SNHG17-202ENST00000414142 XP32Q5T750 250 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms