RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 KRTAP29-1A8MX34 341 aaPredicted RBP4.58□□□□□ -1.68
PRKCA-202ENST00000413366 SPRR1AP35321 89 aa4.58□□□□□ -1.68
PRKCA-202ENST00000413366 ITPR2Q14571 2701 aa4.58□□□□□ -1.68
PRKCA-202ENST00000413366 CSMD1Q96PZ7 3565 aa4.58□□□□□ -1.68
PRKCA-202ENST00000413366 DMDP11532 3685 aa4.57□□□□□ -1.68
PRKCA-202ENST00000413366 SPRR1BP22528 89 aa4.56□□□□□ -1.68
PRKCA-202ENST00000413366 STAB2Q8WWQ8 2551 aa4.55□□□□□ -1.68
PRKCA-202ENST00000413366 NBEAL2Q6ZNJ1 2754 aa4.54□□□□□ -1.68
PRKCA-202ENST00000413366 TEP1Q99973 2627 aaKnown RBP4.54□□□□□ -1.68
PRKCA-202ENST00000413366 SETXQ7Z333 2677 aaKnown RBP4.54□□□□□ -1.68
PRKCA-202ENST00000413366 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
PRKCA-202ENST00000413366 C20orf166-AS1Q96NR2 134 aa4.52□□□□□ -1.69
PRKCA-202ENST00000413366 M0QZ58 72 aa4.51□□□□□ -1.69
PRKCA-202ENST00000413366 KRTAP21-3Q3LHN1 58 aa4.51□□□□□ -1.69
PRKCA-202ENST00000413366 KRTAP1-5Q9BYS1 174 aa4.5□□□□□ -1.69
PRKCA-202ENST00000413366 Q8NDZ9 215 aa4.5□□□□□ -1.69
PRKCA-202ENST00000413366 SMG1Q96Q15 3661 aaKnown RBP4.49□□□□□ -1.69
PRKCA-202ENST00000413366 UBR5O95071 2799 aaPredicted RBP4.49□□□□□ -1.69
PRKCA-202ENST00000413366 A8MU10 97 aa4.49□□□□□ -1.69
PRKCA-202ENST00000413366 DCHS2Q6V1P9 2916 aa4.49□□□□□ -1.69
PRKCA-202ENST00000413366 ADM2Q7Z4H4 148 aa4.49□□□□□ -1.69
PRKCA-202ENST00000413366 ZFHX4Q86UP3 3567 aa4.48□□□□□ -1.69
PRKCA-202ENST00000413366 CUBNO60494 3623 aa4.48□□□□□ -1.69
PRKCA-202ENST00000413366 ZNF292O60281 2723 aa4.47□□□□□ -1.69
PRKCA-202ENST00000413366 CELSR1Q9NYQ6 3014 aa4.47□□□□□ -1.69
PRKCA-202ENST00000413366 NBPF19A0A087WUL8 3843 aa4.46□□□□□ -1.7
PRKCA-202ENST00000413366 KRTAP26-1Q6PEX3 210 aa4.44□□□□□ -1.7
PRKCA-202ENST00000413366 A8MUU9 505 aa4.44□□□□□ -1.7
PRKCA-202ENST00000413366 PANO1I0J062 215 aa4.41□□□□□ -1.7
PRKCA-202ENST00000413366 CELSR2Q9HCU4 2923 aa4.4□□□□□ -1.71
PRKCA-202ENST00000413366 KRTAP4-16G5E9R7 235 aaPredicted RBP4.4□□□□□ -1.71
PRKCA-202ENST00000413366 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
PRKCA-202ENST00000413366 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
PRKCA-202ENST00000413366 ZFHX3Q15911 3703 aa4.37□□□□□ -1.71
PRKCA-202ENST00000413366 NIPBLQ6KC79 2804 aaeCLIP4.35□□□□□ -1.717e-6■■□□□ 12.9
PRKCA-202ENST00000413366 MUC3AQ02505 3323 aa4.34□□□□□ -1.71
PRKCA-202ENST00000413366 CSMD2Q7Z408 3487 aa4.32□□□□□ -1.72
PRKCA-202ENST00000413366 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
PRKCA-202ENST00000413366 SVEP1Q4LDE5 3571 aa4.3□□□□□ -1.72
PRKCA-202ENST00000413366 HIVEP1P15822 2718 aa4.29□□□□□ -1.72
PRKCA-202ENST00000413366 FBN2P35556 2912 aa4.29□□□□□ -1.72
PRKCA-202ENST00000413366 NF1P21359 2839 aa4.28□□□□□ -1.72
PRKCA-202ENST00000413366 IGSF10Q6WRI0 2623 aa4.27□□□□□ -1.73
PRKCA-202ENST00000413366 Q6ZRN7 208 aaPredicted RBP4.27□□□□□ -1.73
PRKCA-202ENST00000413366 PDZD2O15018 2839 aa4.26□□□□□ -1.73
PRKCA-202ENST00000413366 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
PRKCA-202ENST00000413366 TNP1P09430 55 aa4.24□□□□□ -1.73
PRKCA-202ENST00000413366 TENM1Q9UKZ4 2725 aa4.23□□□□□ -1.73
PRKCA-202ENST00000413366 SRRM2Q9UQ35 2752 aaKnown RBP4.22□□□□□ -1.73
PRKCA-202ENST00000413366 P0C880 135 aa4.19□□□□□ -1.74
PRKCA-202ENST00000413366 KRTAP13-2Q52LG2 175 aa4.19□□□□□ -1.74
PRKCA-202ENST00000413366 VPS13CQ709C8 3753 aa4.17□□□□□ -1.74
PRKCA-202ENST00000413366 ZANQ9Y493 2812 aa4.16□□□□□ -1.74
PRKCA-202ENST00000413366 A0A1B0GVY2 172 aa4.16□□□□□ -1.74
PRKCA-202ENST00000413366 FLNCQ14315 2725 aa4.14□□□□□ -1.75
PRKCA-202ENST00000413366 KRTAP7-1Q8IUC3 87 aa4.13□□□□□ -1.75
PRKCA-202ENST00000413366 KRTAP10-8P60410 259 aa4.13□□□□□ -1.75
PRKCA-202ENST00000413366 KRTAP13-1Q8IUC0 172 aa4.13□□□□□ -1.75
PRKCA-202ENST00000413366 H0YAA0 97 aa4.13□□□□□ -1.75
PRKCA-202ENST00000413366 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
PRKCA-202ENST00000413366 KRTAP10-10P60014 251 aa4.11□□□□□ -1.75
PRKCA-202ENST00000413366 MXRA5Q9NR99 2828 aa4.11□□□□□ -1.75
PRKCA-202ENST00000413366 TPRXLQ17RH7 258 aa4.08□□□□□ -1.76
PRKCA-202ENST00000413366 XP32Q5T750 250 aa4.08□□□□□ -1.76
PRKCA-202ENST00000413366 VWFP04275 2813 aa4.07□□□□□ -1.76
PRKCA-202ENST00000413366 PKD1L1Q8TDX9 2849 aa4.04□□□□□ -1.76
PRKCA-202ENST00000413366 TENM3Q9P273 2699 aa4.03□□□□□ -1.76
PRKCA-202ENST00000413366 TGP01266 2768 aa4.03□□□□□ -1.76
PRKCA-202ENST00000413366 HRNRQ86YZ3 2850 aaPredicted RBP4.02□□□□□ -1.77
PRKCA-202ENST00000413366 COL7A1Q02388 2944 aa4.01□□□□□ -1.77
PRKCA-202ENST00000413366 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
PRKCA-202ENST00000413366 AKAP9Q99996 3911 aa3.99□□□□□ -1.77
PRKCA-202ENST00000413366 BSNQ9UPA5 3926 aa3.99□□□□□ -1.77
PRKCA-202ENST00000413366 KRTAP13-3Q3SY46 172 aa3.96□□□□□ -1.77
PRKCA-202ENST00000413366 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
PRKCA-202ENST00000413366 FBN1P35555 2871 aaKnown RBP3.94□□□□□ -1.78
PRKCA-202ENST00000413366 TENM2Q9NT68 2774 aa3.93□□□□□ -1.78
PRKCA-202ENST00000413366 TENM4Q6N022 2769 aa3.93□□□□□ -1.78
PRKCA-202ENST00000413366 INE1O15225 51 aa3.93□□□□□ -1.78
PRKCA-202ENST00000413366 MEGF8Q7Z7M0 2845 aa3.93□□□□□ -1.78
PRKCA-202ENST00000413366 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
PRKCA-202ENST00000413366 OTOGQ6ZRI0 2925 aa3.92□□□□□ -1.78
PRKCA-202ENST00000413366 TRRAPQ9Y4A5 3859 aa3.88□□□□□ -1.79
PRKCA-202ENST00000413366 ZNF469Q96JG9 3925 aaPredicted RBP3.77□□□□□ -1.81
PRKCA-202ENST00000413366 KRTAP13-4Q3LI77 160 aa3.76□□□□□ -1.81
PRKCA-202ENST00000413366 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
PRKCA-202ENST00000413366 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
PRKCA-202ENST00000413366 FBN3Q75N90 2809 aa3.7□□□□□ -1.82
PRKCA-202ENST00000413366 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
PRKCA-202ENST00000413366 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
PRKCA-202ENST00000413366 LYSTQ99698 3801 aa3.56□□□□□ -1.84
PRKCA-202ENST00000413366 KRTAP3-1Q9BYR8 98 aa3.55□□□□□ -1.84
PRKCA-202ENST00000413366 ALMS1Q8TCU4 4167 aa3.54□□□□□ -1.84
PRKCA-202ENST00000413366 FRAS1Q86XX4 4008 aa3.53□□□□□ -1.84
PRKCA-202ENST00000413366 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
PRKCA-202ENST00000413366 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
PRKCA-202ENST00000413366 CMYA5Q8N3K9 4069 aa3.43□□□□□ -1.86
PRKCA-202ENST00000413366 MT1HL1P0DM35 61 aa3.43□□□□□ -1.86
PRKCA-202ENST00000413366 KRTAP4-5Q9BYR2 181 aa3.42□□□□□ -1.86
PRKCA-202ENST00000413366 KRTAP3-2Q9BYR7 98 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms