RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 ZCCHC13Q8WW36 166 aaKnown RBP10.5□□□□□ -0.73
CROCCP2-202ENST00000412962 PRR26Q8N8Z3 221 aa10.49□□□□□ -0.73
CROCCP2-202ENST00000412962 KTN1-AS1Q86SY8 53 aa10.49□□□□□ -0.73
CROCCP2-202ENST00000412962 LCE6AA0A183 80 aa10.47□□□□□ -0.73
CROCCP2-202ENST00000412962 A8MWP4 228 aa10.46□□□□□ -0.74
CROCCP2-202ENST00000412962 CHKB-CPT1BH3BT56 60 aa10.46□□□□□ -0.74
CROCCP2-202ENST00000412962 SACSQ9NZJ4 4579 aa10.44□□□□□ -0.74
CROCCP2-202ENST00000412962 Q96NJ1 140 aa10.43□□□□□ -0.74
CROCCP2-202ENST00000412962 LRP1BQ9NZR2 4599 aa10.42□□□□□ -0.74
CROCCP2-202ENST00000412962 CASC2Q6XLA1 102 aa10.4□□□□□ -0.74
CROCCP2-202ENST00000412962 PRR15LQ9BU68 103 aa10.4□□□□□ -0.74
CROCCP2-202ENST00000412962 CYP4F30PQ9H0H9 118 aa10.39□□□□□ -0.75
CROCCP2-202ENST00000412962 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
CROCCP2-202ENST00000412962 LCA10Q71F78 164 aa10.37□□□□□ -0.75
CROCCP2-202ENST00000412962 NDUFB1O75438 58 aa10.36□□□□□ -0.75
CROCCP2-202ENST00000412962 Q8N9P0 234 aaPredicted RBP10.35□□□□□ -0.75
CROCCP2-202ENST00000412962 LINC00208Q96KT6 92 aa10.34□□□□□ -0.75
CROCCP2-202ENST00000412962 PKHD1P08F94 4074 aa10.33□□□□□ -0.76
CROCCP2-202ENST00000412962 MMP24-AS1A0A0U1RRL7 71 aa10.32□□□□□ -0.76
CROCCP2-202ENST00000412962 MP68P56378 58 aa10.32□□□□□ -0.76
CROCCP2-202ENST00000412962 VPS13BQ7Z7G8 4022 aa10.31□□□□□ -0.76
CROCCP2-202ENST00000412962 A0A087X002 238 aa10.31□□□□□ -0.76
CROCCP2-202ENST00000412962 SSBP3-AS1Q7Z2R9 100 aa10.31□□□□□ -0.76
CROCCP2-202ENST00000412962 A6NED7 52 aa10.3□□□□□ -0.76
CROCCP2-202ENST00000412962 CDK2AP2O75956 126 aa10.27□□□□□ -0.76
CROCCP2-202ENST00000412962 KRTAP13-2Q52LG2 175 aa10.27□□□□□ -0.77
CROCCP2-202ENST00000412962 IGHV6-1A0A0B4J1U7 121 aa10.26□□□□□ -0.77
CROCCP2-202ENST00000412962 A0A1B0GVX0 72 aa10.26□□□□□ -0.77
CROCCP2-202ENST00000412962 H0Y9P7 68 aa10.26□□□□□ -0.77
CROCCP2-202ENST00000412962 A6NN06 94 aa10.26□□□□□ -0.77
CROCCP2-202ENST00000412962 C8orf17Q9NRJ1 99 aa10.26□□□□□ -0.77
CROCCP2-202ENST00000412962 SPINK6Q6UWN8 80 aa10.25□□□□□ -0.77
CROCCP2-202ENST00000412962 NDUFS5O43920 106 aa10.24□□□□□ -0.77
CROCCP2-202ENST00000412962 KRTAP1-4P0C5Y4 121 aa10.23□□□□□ -0.77
CROCCP2-202ENST00000412962 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
CROCCP2-202ENST00000412962 ASB16-AS1Q495Z4 193 aa10.22□□□□□ -0.77
CROCCP2-202ENST00000412962 ATP11AUNQ6ZP68 121 aa10.21□□□□□ -0.78
CROCCP2-202ENST00000412962 DYNC1H1Q14204 4646 aaKnown RBP10.2□□□□□ -0.78
CROCCP2-202ENST00000412962 A0A1B0GVY2 172 aa10.19□□□□□ -0.78
CROCCP2-202ENST00000412962 NOTCH2NLQ7Z3S9 236 aa10.18□□□□□ -0.78
CROCCP2-202ENST00000412962 H3BPC8 53 aa10.18□□□□□ -0.78
CROCCP2-202ENST00000412962 RYR2Q92736 4967 aa10.17□□□□□ -0.78
CROCCP2-202ENST00000412962 Q75L30 129 aa10.16□□□□□ -0.78
CROCCP2-202ENST00000412962 PLA2G1BP04054 148 aaKnown RBP10.15□□□□□ -0.78
CROCCP2-202ENST00000412962 COA5Q86WW8 74 aa10.15□□□□□ -0.78
CROCCP2-202ENST00000412962 SMR3BP02814 79 aaPredicted RBP10.14□□□□□ -0.79
CROCCP2-202ENST00000412962 SPAG11AQ6PDA7 123 aa10.14□□□□□ -0.79
CROCCP2-202ENST00000412962 MRPL34Q9BQ48 92 aaKnown RBP10.13□□□□□ -0.79
CROCCP2-202ENST00000412962 TP53AIP1Q9HCN2 124 aa10.13□□□□□ -0.79
CROCCP2-202ENST00000412962 KMT2CQ8NEZ4 4911 aaKnown RBP10.11□□□□□ -0.79
CROCCP2-202ENST00000412962 C7orf65Q6ZTY9 151 aa10.11□□□□□ -0.79
CROCCP2-202ENST00000412962 CDC42SE1Q9NRR8 79 aa10.1□□□□□ -0.79
CROCCP2-202ENST00000412962 SPINK7P58062 85 aa10.09□□□□□ -0.79
CROCCP2-202ENST00000412962 PCOTHQ58A44 107 aa10.09□□□□□ -0.79
CROCCP2-202ENST00000412962 SPANXA2-OT1Q8N9U9 137 aa10.09□□□□□ -0.79
CROCCP2-202ENST00000412962 TYMSOSQ8TAI1 123 aa10.09□□□□□ -0.79
CROCCP2-202ENST00000412962 PRAC1Q96KF2 57 aa10.09□□□□□ -0.79
CROCCP2-202ENST00000412962 LOC101927531A0A1B0GV80 90 aa10.09□□□□□ -0.79
CROCCP2-202ENST00000412962 APOBP04114 4563 aaKnown RBP10.08□□□□□ -0.8
CROCCP2-202ENST00000412962 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
CROCCP2-202ENST00000412962 FAT1Q14517 4588 aa10.02□□□□□ -0.81
CROCCP2-202ENST00000412962 LINC00313P59037 77 aa10□□□□□ -0.81
CROCCP2-202ENST00000412962 SPINK1P00995 79 aa9.99□□□□□ -0.81
CROCCP2-202ENST00000412962 KRTAP10-4P60372 401 aaPredicted RBP9.98□□□□□ -0.81
CROCCP2-202ENST00000412962 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.81
CROCCP2-202ENST00000412962 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.82
CROCCP2-202ENST00000412962 LINC01554Q52M75 96 aa9.96□□□□□ -0.82
CROCCP2-202ENST00000412962 Q5W150 140 aa9.94□□□□□ -0.82
CROCCP2-202ENST00000412962 LINC01558Q9Y6Z2 57 aa9.94□□□□□ -0.82
CROCCP2-202ENST00000412962 RETNLBQ9BQ08 111 aa9.92□□□□□ -0.82
CROCCP2-202ENST00000412962 KRTAP13-3Q3SY46 172 aa9.91□□□□□ -0.82
CROCCP2-202ENST00000412962 KRTAP16-1A8MUX0 517 aa9.89□□□□□ -0.83
CROCCP2-202ENST00000412962 RPS29P62273 56 aaKnown RBP9.88□□□□□ -0.83
CROCCP2-202ENST00000412962 HRES1P13985 223 aa9.88□□□□□ -0.83
CROCCP2-202ENST00000412962 PKHD1L1Q86WI1 4243 aa9.85□□□□□ -0.83
CROCCP2-202ENST00000412962 A0A0A0MQY5 61 aa9.85□□□□□ -0.83
CROCCP2-202ENST00000412962 RYR3Q15413 4870 aa9.84□□□□□ -0.83
CROCCP2-202ENST00000412962 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
CROCCP2-202ENST00000412962 HSPG2P98160 4391 aa9.75□□□□□ -0.85
CROCCP2-202ENST00000412962 Q5VSD8 79 aa9.72□□□□□ -0.85
CROCCP2-202ENST00000412962 IGKV2-30P06310 120 aa9.71□□□□□ -0.85
CROCCP2-202ENST00000412962 C9orf92A6NGG3 77 aa9.66□□□□□ -0.86
CROCCP2-202ENST00000412962 RYR1P21817 5038 aa9.66□□□□□ -0.86
CROCCP2-202ENST00000412962 IGKV2D-30A0A075B6S6 120 aa9.65□□□□□ -0.86
CROCCP2-202ENST00000412962 LRP1Q07954 4544 aaKnown RBP9.65□□□□□ -0.87
CROCCP2-202ENST00000412962 ACYP2P14621 99 aa9.64□□□□□ -0.87
CROCCP2-202ENST00000412962 FLG2Q5D862 2391 aaPredicted RBP9.63□□□□□ -0.87
CROCCP2-202ENST00000412962 TNXBP22105 4242 aa9.62□□□□□ -0.87
CROCCP2-202ENST00000412962 Q8N1X5 172 aa9.62□□□□□ -0.87
CROCCP2-202ENST00000412962 CSAG1Q6PB30 78 aa9.6□□□□□ -0.87
CROCCP2-202ENST00000412962 DMAC1Q96GE9 116 aa9.59□□□□□ -0.87
CROCCP2-202ENST00000412962 KRTAP17-1Q9BYP8 105 aa9.59□□□□□ -0.87
CROCCP2-202ENST00000412962 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
CROCCP2-202ENST00000412962 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
CROCCP2-202ENST00000412962 A8MUU9 505 aa9.56□□□□□ -0.88
CROCCP2-202ENST00000412962 KIAA1109Q2LD37 5005 aa9.55□□□□□ -0.88
CROCCP2-202ENST00000412962 FAT3Q8TDW7 4589 aa9.54□□□□□ -0.88
CROCCP2-202ENST00000412962 A0A1B0GU69 56 aa9.52□□□□□ -0.89
CROCCP2-202ENST00000412962 EPPK1P58107 5090 aaKnown RBP9.48□□□□□ -0.89
CROCCP2-202ENST00000412962 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms