RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 SPAG11AQ6PDA7 123 aa7.25□□□□□ -1.25
LINC00388-201ENST00000412714 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
LINC00388-201ENST00000412714 KRTAP9-2Q9BYQ4 174 aa7.24□□□□□ -1.25
LINC00388-201ENST00000412714 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
LINC00388-201ENST00000412714 LCE2AQ5TA79 106 aaPredicted RBP7.23□□□□□ -1.25
LINC00388-201ENST00000412714 SS18L2Q9UHA2 77 aa7.22□□□□□ -1.25
LINC00388-201ENST00000412714 DSCR10P59022 87 aa7.21□□□□□ -1.26
LINC00388-201ENST00000412714 CD164Q04900 197 aa7.21□□□□□ -1.26
LINC00388-201ENST00000412714 LINC00472Q9H8W2 130 aa7.21□□□□□ -1.26
LINC00388-201ENST00000412714 FP248Q71RG6 208 aaPredicted RBP7.2□□□□□ -1.26
LINC00388-201ENST00000412714 SSBP3-AS1Q7Z2R9 100 aa7.2□□□□□ -1.26
LINC00388-201ENST00000412714 Q8N9L7 120 aa7.2□□□□□ -1.26
LINC00388-201ENST00000412714 J3KT08 172 aa7.18□□□□□ -1.26
LINC00388-201ENST00000412714 K7EQZ3 153 aa7.17□□□□□ -1.26
LINC00388-201ENST00000412714 SMIM20Q8N5G0 67 aa7.17□□□□□ -1.26
LINC00388-201ENST00000412714 SERP2Q8N6R1 65 aa7.17□□□□□ -1.26
LINC00388-201ENST00000412714 Q96NJ1 140 aa7.16□□□□□ -1.26
LINC00388-201ENST00000412714 A8MWP4 228 aa7.15□□□□□ -1.26
LINC00388-201ENST00000412714 UQCRQO14949 82 aa7.15□□□□□ -1.26
LINC00388-201ENST00000412714 COX7CP15954 63 aa7.15□□□□□ -1.26
LINC00388-201ENST00000412714 SPINK1P00995 79 aa7.14□□□□□ -1.27
LINC00388-201ENST00000412714 CCDC179H3BU77 68 aa7.13□□□□□ -1.27
LINC00388-201ENST00000412714 ASB16-AS1Q495Z4 193 aa7.13□□□□□ -1.27
LINC00388-201ENST00000412714 HRCT1Q6UXD1 115 aa7.13□□□□□ -1.27
LINC00388-201ENST00000412714 TRAV7A0A075B6U4 112 aa7.12□□□□□ -1.27
LINC00388-201ENST00000412714 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
LINC00388-201ENST00000412714 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
LINC00388-201ENST00000412714 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
LINC00388-201ENST00000412714 DEFB116Q30KQ4 102 aa7.11□□□□□ -1.27
LINC00388-201ENST00000412714 Q5XG85 94 aa7.11□□□□□ -1.27
LINC00388-201ENST00000412714 SEC61BP60468 96 aaKnown RBP7.08□□□□□ -1.28
LINC00388-201ENST00000412714 RPS29P62273 56 aaKnown RBP7.08□□□□□ -1.28
LINC00388-201ENST00000412714 OCR1Q9BZK8 76 aa7.08□□□□□ -1.28
LINC00388-201ENST00000412714 NDUFB1O75438 58 aa7.07□□□□□ -1.28
LINC00388-201ENST00000412714 KRTAP9-6A0A140TA67 174 aa7.06□□□□□ -1.28
LINC00388-201ENST00000412714 LIMD2Q9BT23 127 aa7.05□□□□□ -1.28
LINC00388-201ENST00000412714 MMP24-AS1A0A0U1RRL7 71 aa7.04□□□□□ -1.28
LINC00388-201ENST00000412714 A0A1B0GVX0 72 aa7.04□□□□□ -1.28
LINC00388-201ENST00000412714 CASC2Q6XLA1 102 aa7.03□□□□□ -1.28
LINC00388-201ENST00000412714 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
LINC00388-201ENST00000412714 KRTAP4-1Q9BYQ7 146 aa7□□□□□ -1.29
LINC00388-201ENST00000412714 C8orf17Q9NRJ1 99 aa7□□□□□ -1.29
LINC00388-201ENST00000412714 KLKP1Q107X0 134 aa6.99□□□□□ -1.29
LINC00388-201ENST00000412714 XP32Q5T750 250 aa6.99□□□□□ -1.29
LINC00388-201ENST00000412714 hDV103S1A0JD37 113 aa6.98□□□□□ -1.29
LINC00388-201ENST00000412714 C1orf195Q5TG92 126 aa6.98□□□□□ -1.29
LINC00388-201ENST00000412714 C20orf197Q8N268 126 aa6.98□□□□□ -1.29
LINC00388-201ENST00000412714 IGHV6-1A0A0B4J1U7 121 aa6.97□□□□□ -1.29
LINC00388-201ENST00000412714 C8orf87E5RJ46 101 aa6.96□□□□□ -1.3
LINC00388-201ENST00000412714 TMEM254Q8TBM7 123 aa6.96□□□□□ -1.3
LINC00388-201ENST00000412714 CYSTM1Q9H1C7 97 aa6.96□□□□□ -1.3
LINC00388-201ENST00000412714 C5orf47Q569G3 176 aa6.93□□□□□ -1.3
LINC00388-201ENST00000412714 NDUFC1O43677 76 aa6.92□□□□□ -1.3
LINC00388-201ENST00000412714 TMEM258P61165 79 aa6.92□□□□□ -1.3
LINC00388-201ENST00000412714 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
LINC00388-201ENST00000412714 TP53AIP1Q9HCN2 124 aa6.92□□□□□ -1.3
LINC00388-201ENST00000412714 LCE2DQ5TA82 110 aaPredicted RBP6.91□□□□□ -1.3
LINC00388-201ENST00000412714 H7BZZ5 65 aa6.9□□□□□ -1.3
LINC00388-201ENST00000412714 NOTCH2NLQ7Z3S9 236 aa6.9□□□□□ -1.3
LINC00388-201ENST00000412714 SNURFQ9Y675 71 aa6.9□□□□□ -1.3
LINC00388-201ENST00000412714 ZCCHC13Q8WW36 166 aaKnown RBP6.89□□□□□ -1.31
LINC00388-201ENST00000412714 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
LINC00388-201ENST00000412714 H3BPC8 53 aa6.88□□□□□ -1.31
LINC00388-201ENST00000412714 MP68P56378 58 aa6.88□□□□□ -1.31
LINC00388-201ENST00000412714 PCOTHQ58A44 107 aa6.88□□□□□ -1.31
LINC00388-201ENST00000412714 TRAV22A0A0B4J277 110 aa6.87□□□□□ -1.31
LINC00388-201ENST00000412714 H0Y9P7 68 aa6.86□□□□□ -1.31
LINC00388-201ENST00000412714 LINC00313P59037 77 aa6.86□□□□□ -1.31
LINC00388-201ENST00000412714 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
LINC00388-201ENST00000412714 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.31
LINC00388-201ENST00000412714 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
LINC00388-201ENST00000412714 KRTAP19-2Q3LHN2 52 aa6.83□□□□□ -1.32
LINC00388-201ENST00000412714 NDUFS5O43920 106 aa6.82□□□□□ -1.32
LINC00388-201ENST00000412714 Q8N9P0 234 aaPredicted RBP6.82□□□□□ -1.32
LINC00388-201ENST00000412714 FSIP2Q5CZC0 6907 aa6.82□□□□□ -1.32
LINC00388-201ENST00000412714 FAM236DA0A1B0GTK5 79 aa6.81□□□□□ -1.32
LINC00388-201ENST00000412714 FAM236CP0DP71 79 aa6.81□□□□□ -1.32
LINC00388-201ENST00000412714 MT1HP80294 61 aa6.81□□□□□ -1.32
LINC00388-201ENST00000412714 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
LINC00388-201ENST00000412714 LINC00208Q96KT6 92 aa6.79□□□□□ -1.32
LINC00388-201ENST00000412714 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
LINC00388-201ENST00000412714 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
LINC00388-201ENST00000412714 LOC101927531A0A1B0GV80 90 aa6.73□□□□□ -1.33
LINC00388-201ENST00000412714 M0R2T5 61 aa6.73□□□□□ -1.33
LINC00388-201ENST00000412714 COX6B2Q6YFQ2 88 aa6.73□□□□□ -1.33
LINC00388-201ENST00000412714 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
LINC00388-201ENST00000412714 Q5W150 140 aa6.72□□□□□ -1.33
LINC00388-201ENST00000412714 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
LINC00388-201ENST00000412714 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
LINC00388-201ENST00000412714 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
LINC00388-201ENST00000412714 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
LINC00388-201ENST00000412714 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
LINC00388-201ENST00000412714 SERP1Q9Y6X1 66 aa6.69□□□□□ -1.34
LINC00388-201ENST00000412714 A8MUU9 505 aa6.68□□□□□ -1.34
LINC00388-201ENST00000412714 CYP4F30PQ9H0H9 118 aa6.68□□□□□ -1.34
LINC00388-201ENST00000412714 IGKV2-30P06310 120 aa6.64□□□□□ -1.35
LINC00388-201ENST00000412714 Q75L30 129 aa6.62□□□□□ -1.35
LINC00388-201ENST00000412714 ATP11AUNQ6ZP68 121 aa6.61□□□□□ -1.35
LINC00388-201ENST00000412714 C7orf65Q6ZTY9 151 aa6.56□□□□□ -1.36
LINC00388-201ENST00000412714 IGKV2D-30A0A075B6S6 120 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms