RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SPENQ96T58 3664 aaKnown RBP1.11□□□□□ -2.23
BRCA1-204ENST00000412061 TACC2O95359 2948 aa1.1□□□□□ -2.23
BRCA1-204ENST00000412061 AKAP13Q12802 2813 aa1.1□□□□□ -2.23
BRCA1-204ENST00000412061 ALMS1Q8TCU4 4167 aa1.1□□□□□ -2.23
BRCA1-204ENST00000412061 A0A096LPF7 62 aa1.1□□□□□ -2.23
BRCA1-204ENST00000412061 SPART-AS1P0CW21 52 aa1.1□□□□□ -2.23
BRCA1-204ENST00000412061 DEFB136Q30KP8 78 aa1.1□□□□□ -2.23
BRCA1-204ENST00000412061 WNK1Q9H4A3 2382 aa1.1□□□□□ -2.23
BRCA1-204ENST00000412061 SMG1Q96Q15 3661 aaKnown RBP1.1□□□□□ -2.23
BRCA1-204ENST00000412061 PCNX1Q96RV3 2341 aa1.09□□□□□ -2.23
BRCA1-204ENST00000412061 CSMD1Q96PZ7 3565 aa1.09□□□□□ -2.24
BRCA1-204ENST00000412061 CEP250Q9BV73 2442 aa1.09□□□□□ -2.24
BRCA1-204ENST00000412061 LINC01556Q5JQF7 62 aa1.09□□□□□ -2.24
BRCA1-204ENST00000412061 APLNQ9ULZ1 77 aa1.09□□□□□ -2.24
BRCA1-204ENST00000412061 CNOT1A5YKK6 2376 aaKnown RBP1.08□□□□□ -2.24
BRCA1-204ENST00000412061 CELSR3Q9NYQ7 3312 aa1.08□□□□□ -2.24
BRCA1-204ENST00000412061 PKDREJQ9NTG1 2253 aa1.08□□□□□ -2.24
BRCA1-204ENST00000412061 DEFB124Q8NES8 71 aa1.08□□□□□ -2.24
BRCA1-204ENST00000412061 APC2O95996 2303 aa1.08□□□□□ -2.24
BRCA1-204ENST00000412061 ZFHX4Q86UP3 3567 aa1.07□□□□□ -2.24
BRCA1-204ENST00000412061 TPRP12270 2363 aaKnown RBP1.07□□□□□ -2.24
BRCA1-204ENST00000412061 MYO15AQ9UKN7 3530 aa1.07□□□□□ -2.24
BRCA1-204ENST00000412061 PRRC2CQ9Y520 2896 aaKnown RBP1.06□□□□□ -2.24
BRCA1-204ENST00000412061 ABCA12Q86UK0 2595 aa1.06□□□□□ -2.24
BRCA1-204ENST00000412061 ADGRG4Q8IZF6 3080 aa1.06□□□□□ -2.24
BRCA1-204ENST00000412061 COX6B2Q6YFQ2 88 aa1.06□□□□□ -2.24
BRCA1-204ENST00000412061 ZNF292O60281 2723 aa1.06□□□□□ -2.24
BRCA1-204ENST00000412061 MAP1BP46821 2468 aaKnown RBP1.06□□□□□ -2.24
BRCA1-204ENST00000412061 DCHS2Q6V1P9 2916 aa1.05□□□□□ -2.24
BRCA1-204ENST00000412061 EP300Q09472 2414 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-204ENST00000412061 NBPF19A0A087WUL8 3843 aa1.05□□□□□ -2.24
BRCA1-204ENST00000412061 BOD1L1Q8NFC6 3051 aa1.05□□□□□ -2.24
BRCA1-204ENST00000412061 H0YAA0 97 aa1.05□□□□□ -2.24
BRCA1-204ENST00000412061 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
BRCA1-204ENST00000412061 MAP1AP78559 2803 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-204ENST00000412061 CELSR1Q9NYQ6 3014 aa1.05□□□□□ -2.24
BRCA1-204ENST00000412061 LRBAP50851 2863 aa1.05□□□□□ -2.24
BRCA1-204ENST00000412061 COL12A1Q99715 3063 aa1.05□□□□□ -2.24
BRCA1-204ENST00000412061 OTOGQ6ZRI0 2925 aa1.04□□□□□ -2.24
BRCA1-204ENST00000412061 CELSR2Q9HCU4 2923 aa1.04□□□□□ -2.24
BRCA1-204ENST00000412061 AKAP6Q13023 2319 aa1.04□□□□□ -2.24
BRCA1-204ENST00000412061 PRLHP81277 87 aa1.04□□□□□ -2.24
BRCA1-204ENST00000412061 H1FX-AS1Q4G0G2 97 aa1.04□□□□□ -2.24
BRCA1-204ENST00000412061 SPINK6Q6UWN8 80 aa1.04□□□□□ -2.24
BRCA1-204ENST00000412061 DMXL1Q9Y485 3027 aa1.04□□□□□ -2.24
BRCA1-204ENST00000412061 CREBBPQ92793 2442 aa1.04□□□□□ -2.24
BRCA1-204ENST00000412061 CHD6Q8TD26 2715 aa1.04□□□□□ -2.24
BRCA1-204ENST00000412061 AKAP9Q99996 3911 aa1.03□□□□□ -2.24
BRCA1-204ENST00000412061 LOC400499M0QZD8 3231 aa1.03□□□□□ -2.24
BRCA1-204ENST00000412061 TENM2Q9NT68 2774 aa1.03□□□□□ -2.24
BRCA1-204ENST00000412061 DEFB4AO15263 64 aa1.03□□□□□ -2.24
BRCA1-204ENST00000412061 HTN3P15516 51 aa1.03□□□□□ -2.24
BRCA1-204ENST00000412061 DEFB135Q30KP9 77 aa1.03□□□□□ -2.24
BRCA1-204ENST00000412061 ATMQ13315 3056 aa1.03□□□□□ -2.24
BRCA1-204ENST00000412061 BDP1A6H8Y1 2624 aa1.03□□□□□ -2.24
BRCA1-204ENST00000412061 ITPR1Q14643 2758 aa1.03□□□□□ -2.25
BRCA1-204ENST00000412061 ANKHD1Q8IWZ3 2542 aaKnown RBP1.03□□□□□ -2.25
BRCA1-204ENST00000412061 LAMA5O15230 3695 aa1.02□□□□□ -2.25
BRCA1-204ENST00000412061 ASPMQ8IZT6 3477 aa1.02□□□□□ -2.25
BRCA1-204ENST00000412061 SVEP1Q4LDE5 3571 aa1.02□□□□□ -2.25
BRCA1-204ENST00000412061 NCOR1O75376 2440 aa1.02□□□□□ -2.25
BRCA1-204ENST00000412061 A0A096LNI7 61 aa1.02□□□□□ -2.25
BRCA1-204ENST00000412061 RELNP78509 3460 aa1.01□□□□□ -2.25
BRCA1-204ENST00000412061 ACACAQ13085 2346 aa1.01□□□□□ -2.25
BRCA1-204ENST00000412061 HRNRQ86YZ3 2850 aaPredicted RBP1.01□□□□□ -2.25
BRCA1-204ENST00000412061 FBN2P35556 2912 aa1.01□□□□□ -2.25
BRCA1-204ENST00000412061 BSNQ9UPA5 3926 aa1.01□□□□□ -2.25
BRCA1-204ENST00000412061 SPTAN1Q13813 2472 aaKnown RBP1.01□□□□□ -2.25
BRCA1-204ENST00000412061 EYSQ5T1H1 3165 aa1□□□□□ -2.25
BRCA1-204ENST00000412061 NF1P21359 2839 aa1□□□□□ -2.25
BRCA1-204ENST00000412061 FRAS1Q86XX4 4008 aa1□□□□□ -2.25
BRCA1-204ENST00000412061 GVINP1Q7Z2Y8 2422 aa1□□□□□ -2.25
BRCA1-204ENST00000412061 ABCA2Q9BZC7 2435 aa1□□□□□ -2.25
BRCA1-204ENST00000412061 CEP290O15078 2479 aa1□□□□□ -2.25
BRCA1-204ENST00000412061 CRYBG3Q68DQ2 2970 aa0.99□□□□□ -2.25
BRCA1-204ENST00000412061 SPTA1P02549 2419 aa0.99□□□□□ -2.25
BRCA1-204ENST00000412061 SPINK1P00995 79 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 KRTAP2-3P0C7H8 128 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 APCP25054 2843 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 CSPG4Q6UVK1 2322 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 SPG11Q96JI7 2443 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 KRTAP2-4Q9BYR9 128 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 KRTAP2-1Q9BYU5 128 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 MXRA5Q9NR99 2828 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 PIEZO1Q92508 2521 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 NBASA2RRP1 2371 aa0.98□□□□□ -2.25
BRCA1-204ENST00000412061 DNAH1Q9P2D7 4330 aa0.97□□□□□ -2.25
BRCA1-204ENST00000412061 VPS13CQ709C8 3753 aa0.97□□□□□ -2.25
BRCA1-204ENST00000412061 SPTBN4Q9H254 2564 aa0.96□□□□□ -2.26
BRCA1-204ENST00000412061 NCOR2Q9Y618 2525 aa0.96□□□□□ -2.26
BRCA1-204ENST00000412061 ANK3Q12955 4377 aaKnown RBP0.96□□□□□ -2.26
BRCA1-204ENST00000412061 UTP20O75691 2785 aaKnown RBP0.96□□□□□ -2.26
BRCA1-204ENST00000412061 NBEAL2Q6ZNJ1 2754 aa0.96□□□□□ -2.26
BRCA1-204ENST00000412061 SETXQ7Z333 2677 aaKnown RBP0.96□□□□□ -2.26
BRCA1-204ENST00000412061 CSMD2Q7Z408 3487 aa0.95□□□□□ -2.26
BRCA1-204ENST00000412061 RPS29P62273 56 aaKnown RBP0.95□□□□□ -2.26
BRCA1-204ENST00000412061 S4R3F8 94 aa0.95□□□□□ -2.26
BRCA1-204ENST00000412061 TEX15Q9BXT5 2789 aa0.95□□□□□ -2.26
BRCA1-204ENST00000412061 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
BRCA1-204ENST00000412061 ANKRD11Q6UB99 2663 aaPredicted RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms