RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 DYNC1H1Q14204 4646 aaKnown RBP14.15□□□□□ -0.14
PMS1-205ENST00000409985 LINC00336Q6ZUF6 198 aa14.15□□□□□ -0.14
PMS1-205ENST00000409985 CD164Q04900 197 aa14.14□□□□□ -0.15
PMS1-205ENST00000409985 Q1T7F1 81 aa14.14□□□□□ -0.15
PMS1-205ENST00000409985 CDK2AP2O75956 126 aa14.14□□□□□ -0.15
PMS1-205ENST00000409985 LRP1BQ9NZR2 4599 aa14.14□□□□□ -0.15
PMS1-205ENST00000409985 MPLKIPQ8TAP9 179 aa14.11□□□□□ -0.15
PMS1-205ENST00000409985 PRO0628Q9UI54 55 aa14.1□□□□□ -0.15
PMS1-205ENST00000409985 SSBP3-AS1Q7Z2R9 100 aa14.09□□□□□ -0.15
PMS1-205ENST00000409985 DNAH8Q96JB1 4490 aa14.08□□□□□ -0.16
PMS1-205ENST00000409985 ANAPC11Q9NYG5 84 aa14.06□□□□□ -0.16
PMS1-205ENST00000409985 MRPL34Q9BQ48 92 aaKnown RBP14.06□□□□□ -0.16
PMS1-205ENST00000409985 IGHV6-1A0A0B4J1U7 121 aa14.05□□□□□ -0.16
PMS1-205ENST00000409985 PRR4Q16378 134 aa14.04□□□□□ -0.16
PMS1-205ENST00000409985 V9GYY9 64 aa14.04□□□□□ -0.16
PMS1-205ENST00000409985 IGLV7-46A0A075B6I9 117 aa14.03□□□□□ -0.16
PMS1-205ENST00000409985 APOBP04114 4563 aaKnown RBP13.98□□□□□ -0.17
PMS1-205ENST00000409985 CIRBP-AS1Q8TBR5 109 aa13.97□□□□□ -0.17
PMS1-205ENST00000409985 KRTAP10-1P60331 282 aa13.96□□□□□ -0.17
PMS1-205ENST00000409985 Q6ZSA8 131 aa13.95□□□□□ -0.18
PMS1-205ENST00000409985 C1orf195Q5TG92 126 aa13.94□□□□□ -0.18
PMS1-205ENST00000409985 C8orf87E5RJ46 101 aa13.93□□□□□ -0.18
PMS1-205ENST00000409985 NDUFS5O43920 106 aa13.91□□□□□ -0.18
PMS1-205ENST00000409985 A0A087X002 238 aa13.88□□□□□ -0.19
PMS1-205ENST00000409985 NOTCH2NLQ7Z3S9 236 aa13.88□□□□□ -0.19
PMS1-205ENST00000409985 BRK1Q8WUW1 75 aa13.86□□□□□ -0.19
PMS1-205ENST00000409985 LOC101927531A0A1B0GV80 90 aa13.85□□□□□ -0.19
PMS1-205ENST00000409985 KIAA1109Q2LD37 5005 aa13.84□□□□□ -0.19
PMS1-205ENST00000409985 LIMD2Q9BT23 127 aa13.84□□□□□ -0.19
PMS1-205ENST00000409985 SPINK6Q6UWN8 80 aa13.82□□□□□ -0.2
PMS1-205ENST00000409985 PCOTHQ58A44 107 aa13.81□□□□□ -0.2
PMS1-205ENST00000409985 COA5Q86WW8 74 aa13.81□□□□□ -0.2
PMS1-205ENST00000409985 KRTAP13-3Q3SY46 172 aa13.8□□□□□ -0.2
PMS1-205ENST00000409985 HSPG2P98160 4391 aa13.8□□□□□ -0.2
PMS1-205ENST00000409985 Q8N9P0 234 aaPredicted RBP13.8□□□□□ -0.2
PMS1-205ENST00000409985 RYR1P21817 5038 aa13.78□□□□□ -0.2
PMS1-205ENST00000409985 FAT1Q14517 4588 aa13.77□□□□□ -0.2
PMS1-205ENST00000409985 KRTAP13-2Q52LG2 175 aa13.76□□□□□ -0.21
PMS1-205ENST00000409985 BIRC6Q9NR09 4857 aa13.76□□□□□ -0.21
PMS1-205ENST00000409985 PSPHP1O15172 72 aa13.73□□□□□ -0.21
PMS1-205ENST00000409985 LINC00313P59037 77 aa13.72□□□□□ -0.21
PMS1-205ENST00000409985 Q5W150 140 aa13.7□□□□□ -0.22
PMS1-205ENST00000409985 A8MUN3 132 aa13.7□□□□□ -0.22
PMS1-205ENST00000409985 Q5VV11 94 aa13.67□□□□□ -0.22
PMS1-205ENST00000409985 KRTAP1-4P0C5Y4 121 aa13.67□□□□□ -0.22
PMS1-205ENST00000409985 FAM229AH3BQW9 127 aa13.66□□□□□ -0.22
PMS1-205ENST00000409985 VPS13BQ7Z7G8 4022 aa13.66□□□□□ -0.22
PMS1-205ENST00000409985 KRTAP17-1Q9BYP8 105 aa13.63□□□□□ -0.23
PMS1-205ENST00000409985 HRES1P13985 223 aa13.62□□□□□ -0.23
PMS1-205ENST00000409985 LINC01558Q9Y6Z2 57 aa13.59□□□□□ -0.23
PMS1-205ENST00000409985 Q75L30 129 aa13.58□□□□□ -0.24
PMS1-205ENST00000409985 SMR3BP02814 79 aaPredicted RBP13.57□□□□□ -0.24
PMS1-205ENST00000409985 PRR15LQ9BU68 103 aa13.57□□□□□ -0.24
PMS1-205ENST00000409985 KRTAP16-1A8MUX0 517 aa13.55□□□□□ -0.24
PMS1-205ENST00000409985 SPINK1P00995 79 aa13.53□□□□□ -0.24
PMS1-205ENST00000409985 ACYP2P14621 99 aa13.52□□□□□ -0.25
PMS1-205ENST00000409985 C4orf48Q5BLP8 95 aa13.52□□□□□ -0.25
PMS1-205ENST00000409985 CHKB-CPT1BH3BT56 60 aa13.5□□□□□ -0.25
PMS1-205ENST00000409985 PLA2G1BP04054 148 aaKnown RBP13.5□□□□□ -0.25
PMS1-205ENST00000409985 IGKV2-30P06310 120 aa13.5□□□□□ -0.25
PMS1-205ENST00000409985 HERC2O95714 4834 aa13.49□□□□□ -0.25
PMS1-205ENST00000409985 RPS29P62273 56 aaKnown RBP13.48□□□□□ -0.25
PMS1-205ENST00000409985 TYMSOSQ8TAI1 123 aa13.48□□□□□ -0.25
PMS1-205ENST00000409985 DMAC1Q96GE9 116 aa13.47□□□□□ -0.25
PMS1-205ENST00000409985 KRTAP10-4P60372 401 aaPredicted RBP13.43□□□□□ -0.26
PMS1-205ENST00000409985 SPAG11AQ6PDA7 123 aa13.43□□□□□ -0.26
PMS1-205ENST00000409985 PRR26Q8N8Z3 221 aa13.37□□□□□ -0.27
PMS1-205ENST00000409985 A6NED7 52 aa13.33□□□□□ -0.28
PMS1-205ENST00000409985 Q5VSD8 79 aa13.33□□□□□ -0.28
PMS1-205ENST00000409985 Q8N1X5 172 aa13.33□□□□□ -0.28
PMS1-205ENST00000409985 KRTAP4-5Q9BYR2 181 aa13.32□□□□□ -0.28
PMS1-205ENST00000409985 PKHD1L1Q86WI1 4243 aa13.32□□□□□ -0.28
PMS1-205ENST00000409985 LINC00304Q8N9R0 145 aa13.31□□□□□ -0.28
PMS1-205ENST00000409985 ABCA13Q86UQ4 5058 aa13.31□□□□□ -0.28
PMS1-205ENST00000409985 CDC42SE1Q9NRR8 79 aa13.29□□□□□ -0.28
PMS1-205ENST00000409985 ATP11AUNQ6ZP68 121 aa13.27□□□□□ -0.28
PMS1-205ENST00000409985 RETNLBQ9BQ08 111 aa13.27□□□□□ -0.28
PMS1-205ENST00000409985 LCA10Q71F78 164 aa13.27□□□□□ -0.29
PMS1-205ENST00000409985 LRP1Q07954 4544 aaKnown RBP13.21□□□□□ -0.29
PMS1-205ENST00000409985 A8MU10 97 aa13.21□□□□□ -0.3
PMS1-205ENST00000409985 MYCBP2O75592 4640 aa13.2□□□□□ -0.3
PMS1-205ENST00000409985 IGKV2D-30A0A075B6S6 120 aa13.18□□□□□ -0.3
PMS1-205ENST00000409985 PMAIP1Q13794 54 aa13.16□□□□□ -0.3
PMS1-205ENST00000409985 FAT3Q8TDW7 4589 aa13.14□□□□□ -0.31
PMS1-205ENST00000409985 FLG2Q5D862 2391 aaPredicted RBP13.13□□□□□ -0.31
PMS1-205ENST00000409985 C7orf65Q6ZTY9 151 aa13.13□□□□□ -0.31
PMS1-205ENST00000409985 PCLOQ9Y6V0 5065 aa13.13□□□□□ -0.31
PMS1-205ENST00000409985 SPINK7P58062 85 aa13.12□□□□□ -0.31
PMS1-205ENST00000409985 SPTSSBQ8NFR3 76 aa13.05□□□□□ -0.32
PMS1-205ENST00000409985 C20orf166-AS1Q96NR2 134 aa13.05□□□□□ -0.32
PMS1-205ENST00000409985 A0A1B0GU69 56 aa13.04□□□□□ -0.32
PMS1-205ENST00000409985 A8MUU9 505 aa13.04□□□□□ -0.32
PMS1-205ENST00000409985 TNXBP22105 4242 aa13□□□□□ -0.33
PMS1-205ENST00000409985 A6NN06 94 aa12.99□□□□□ -0.33
PMS1-205ENST00000409985 KTN1-AS1Q86SY8 53 aa12.91□□□□□ -0.34
PMS1-205ENST00000409985 SPATA8Q6RVD6 105 aa12.89□□□□□ -0.35
PMS1-205ENST00000409985 UQCR11O14957 56 aa12.85□□□□□ -0.35
PMS1-205ENST00000409985 C9orf92A6NGG3 77 aa12.83□□□□□ -0.36
PMS1-205ENST00000409985 MT1HL1P0DM35 61 aa12.82□□□□□ -0.36
PMS1-205ENST00000409985 KRTAP10-8P60410 259 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms