RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ZNF861PO60384 105 aa7.81□□□□□ -1.16
SMARCB1-203ENST00000407082 A0A0U1RQV1 116 aa7.8□□□□□ -1.16
SMARCB1-203ENST00000407082 PSORS1C2Q9UIG4 136 aa7.8□□□□□ -1.16
SMARCB1-203ENST00000407082 SNURFQ9Y675 71 aa7.8□□□□□ -1.16
SMARCB1-203ENST00000407082 SERP1Q9Y6X1 66 aa7.8□□□□□ -1.16
SMARCB1-203ENST00000407082 A8MWP4 228 aa7.79□□□□□ -1.16
SMARCB1-203ENST00000407082 KRTAP10-4P60372 401 aaPredicted RBP7.79□□□□□ -1.16
SMARCB1-203ENST00000407082 PRR15Q8IV56 129 aa7.78□□□□□ -1.16
SMARCB1-203ENST00000407082 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
SMARCB1-203ENST00000407082 H3BPC8 53 aa7.76□□□□□ -1.17
SMARCB1-203ENST00000407082 IGLV9-49A0A0B4J1Y8 123 aa7.75□□□□□ -1.17
SMARCB1-203ENST00000407082 A0A0G2JQZ4 141 aa7.75□□□□□ -1.17
SMARCB1-203ENST00000407082 MP68P56378 58 aa7.75□□□□□ -1.17
SMARCB1-203ENST00000407082 FAT3Q8TDW7 4589 aa7.74□□□□□ -1.17
SMARCB1-203ENST00000407082 CASC2Q6XLA1 102 aa7.74□□□□□ -1.17
SMARCB1-203ENST00000407082 IGLV7-43P04211 117 aa7.73□□□□□ -1.17
SMARCB1-203ENST00000407082 DEFB116Q30KQ4 102 aa7.72□□□□□ -1.17
SMARCB1-203ENST00000407082 CD164Q04900 197 aa7.71□□□□□ -1.18
SMARCB1-203ENST00000407082 WFDC13Q8IUB5 93 aa7.71□□□□□ -1.18
SMARCB1-203ENST00000407082 MT1HL1P0DM35 61 aa7.7□□□□□ -1.18
SMARCB1-203ENST00000407082 SSBP3-AS1Q7Z2R9 100 aa7.7□□□□□ -1.18
SMARCB1-203ENST00000407082 LRP2P98164 4655 aa7.69□□□□□ -1.18
SMARCB1-203ENST00000407082 MOBPQ13875 183 aa7.69□□□□□ -1.18
SMARCB1-203ENST00000407082 TP53AIP1Q9HCN2 124 aa7.69□□□□□ -1.18
SMARCB1-203ENST00000407082 SMIM26A0A096LP01 95 aa7.66□□□□□ -1.18
SMARCB1-203ENST00000407082 hDV103S1A0JD37 113 aa7.66□□□□□ -1.18
SMARCB1-203ENST00000407082 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
SMARCB1-203ENST00000407082 MMP24-AS1A0A0U1RRL7 71 aa7.62□□□□□ -1.19
SMARCB1-203ENST00000407082 A0A1B0GVX0 72 aa7.62□□□□□ -1.19
SMARCB1-203ENST00000407082 H0Y9P7 68 aa7.62□□□□□ -1.19
SMARCB1-203ENST00000407082 FAM229BQ4G0N7 80 aa7.62□□□□□ -1.19
SMARCB1-203ENST00000407082 HRCT1Q6UXD1 115 aa7.62□□□□□ -1.19
SMARCB1-203ENST00000407082 Q96NJ1 140 aa7.62□□□□□ -1.19
SMARCB1-203ENST00000407082 ASB16-AS1Q495Z4 193 aa7.61□□□□□ -1.19
SMARCB1-203ENST00000407082 C8orf17Q9NRJ1 99 aa7.61□□□□□ -1.19
SMARCB1-203ENST00000407082 PKHD1L1Q86WI1 4243 aa7.59□□□□□ -1.19
SMARCB1-203ENST00000407082 LINC00208Q96KT6 92 aa7.59□□□□□ -1.19
SMARCB1-203ENST00000407082 TRAV22A0A0B4J277 110 aa7.58□□□□□ -1.2
SMARCB1-203ENST00000407082 SPANXA2-OT1Q8N9U9 137 aa7.58□□□□□ -1.2
SMARCB1-203ENST00000407082 CYP4F30PQ9H0H9 118 aa7.58□□□□□ -1.2
SMARCB1-203ENST00000407082 C8orf87E5RJ46 101 aa7.57□□□□□ -1.2
SMARCB1-203ENST00000407082 SPINK6Q6UWN8 80 aa7.57□□□□□ -1.2
SMARCB1-203ENST00000407082 IGHV6-1A0A0B4J1U7 121 aa7.56□□□□□ -1.2
SMARCB1-203ENST00000407082 MRPL34Q9BQ48 92 aaKnown RBP7.56□□□□□ -1.2
SMARCB1-203ENST00000407082 KRTAP9-2Q9BYQ4 174 aa7.56□□□□□ -1.2
SMARCB1-203ENST00000407082 C1orf64Q8NEQ6 169 aa7.55□□□□□ -1.2
SMARCB1-203ENST00000407082 ANAPC11Q9NYG5 84 aa7.55□□□□□ -1.2
SMARCB1-203ENST00000407082 Q5XG85 94 aa7.54□□□□□ -1.2
SMARCB1-203ENST00000407082 LIMD2Q9BT23 127 aa7.53□□□□□ -1.2
SMARCB1-203ENST00000407082 NDUFS5O43920 106 aa7.52□□□□□ -1.21
SMARCB1-203ENST00000407082 SVIPQ8NHG7 77 aa7.52□□□□□ -1.21
SMARCB1-203ENST00000407082 TNXBP22105 4242 aa7.5□□□□□ -1.21
SMARCB1-203ENST00000407082 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
SMARCB1-203ENST00000407082 V9GYY9 64 aa7.47□□□□□ -1.21
SMARCB1-203ENST00000407082 KRTAP9-6A0A140TA67 174 aa7.46□□□□□ -1.22
SMARCB1-203ENST00000407082 C4orf26Q17RF5 130 aa7.45□□□□□ -1.22
SMARCB1-203ENST00000407082 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
SMARCB1-203ENST00000407082 LOC101927531A0A1B0GV80 90 aa7.44□□□□□ -1.22
SMARCB1-203ENST00000407082 LINC00313P59037 77 aa7.43□□□□□ -1.22
SMARCB1-203ENST00000407082 FP248Q71RG6 208 aaPredicted RBP7.43□□□□□ -1.22
SMARCB1-203ENST00000407082 SPINK1P00995 79 aa7.42□□□□□ -1.22
SMARCB1-203ENST00000407082 KRTAP1-4P0C5Y4 121 aa7.42□□□□□ -1.22
SMARCB1-203ENST00000407082 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
SMARCB1-203ENST00000407082 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
SMARCB1-203ENST00000407082 KRTAP13-2Q52LG2 175 aa7.41□□□□□ -1.22
SMARCB1-203ENST00000407082 SPAG11AQ6PDA7 123 aa7.41□□□□□ -1.22
SMARCB1-203ENST00000407082 TYMSOSQ8TAI1 123 aa7.41□□□□□ -1.22
SMARCB1-203ENST00000407082 A0A087X002 238 aa7.4□□□□□ -1.22
SMARCB1-203ENST00000407082 RPS29P62273 56 aaKnown RBP7.39□□□□□ -1.23
SMARCB1-203ENST00000407082 Q1T7F1 81 aa7.39□□□□□ -1.23
SMARCB1-203ENST00000407082 C1orf195Q5TG92 126 aa7.39□□□□□ -1.23
SMARCB1-203ENST00000407082 PRR26Q8N8Z3 221 aa7.38□□□□□ -1.23
SMARCB1-203ENST00000407082 PRR4Q16378 134 aa7.37□□□□□ -1.23
SMARCB1-203ENST00000407082 MPLKIPQ8TAP9 179 aa7.36□□□□□ -1.23
SMARCB1-203ENST00000407082 Q8N9P0 234 aaPredicted RBP7.35□□□□□ -1.23
SMARCB1-203ENST00000407082 LPAP08519 4548 aa7.35□□□□□ -1.23
SMARCB1-203ENST00000407082 PCOTHQ58A44 107 aa7.34□□□□□ -1.23
SMARCB1-203ENST00000407082 NOTCH2NLQ7Z3S9 236 aa7.34□□□□□ -1.23
SMARCB1-203ENST00000407082 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
SMARCB1-203ENST00000407082 COA5Q86WW8 74 aa7.29□□□□□ -1.24
SMARCB1-203ENST00000407082 MUC2Q02817 5179 aa7.29□□□□□ -1.24
SMARCB1-203ENST00000407082 FAT4Q6V0I7 4981 aa7.28□□□□□ -1.24
SMARCB1-203ENST00000407082 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
SMARCB1-203ENST00000407082 PRO0628Q9UI54 55 aa7.27□□□□□ -1.25
SMARCB1-203ENST00000407082 ACYP2P14621 99 aa7.26□□□□□ -1.25
SMARCB1-203ENST00000407082 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
SMARCB1-203ENST00000407082 Q5W150 140 aa7.25□□□□□ -1.25
SMARCB1-203ENST00000407082 KRTAP16-1A8MUX0 517 aa7.23□□□□□ -1.25
SMARCB1-203ENST00000407082 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
SMARCB1-203ENST00000407082 BRK1Q8WUW1 75 aa7.19□□□□□ -1.26
SMARCB1-203ENST00000407082 HRES1P13985 223 aa7.18□□□□□ -1.26
SMARCB1-203ENST00000407082 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
SMARCB1-203ENST00000407082 LINC01558Q9Y6Z2 57 aa7.16□□□□□ -1.26
SMARCB1-203ENST00000407082 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
SMARCB1-203ENST00000407082 PSPHP1O15172 72 aa7.15□□□□□ -1.26
SMARCB1-203ENST00000407082 A8MUN3 132 aa7.13□□□□□ -1.27
SMARCB1-203ENST00000407082 PRR15LQ9BU68 103 aa7.13□□□□□ -1.27
SMARCB1-203ENST00000407082 RETNLBQ9BQ08 111 aa7.12□□□□□ -1.27
SMARCB1-203ENST00000407082 C7orf65Q6ZTY9 151 aa7.11□□□□□ -1.27
SMARCB1-203ENST00000407082 Q75L30 129 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms