RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ALMS1Q8TCU4 4167 aa9.89□□□□□ -0.83
NUP50-203ENST00000407019 A0A087X002 238 aa9.89□□□□□ -0.83
NUP50-203ENST00000407019 SPINK6Q6UWN8 80 aa9.89□□□□□ -0.83
NUP50-203ENST00000407019 Q6ZSA8 131 aa9.89□□□□□ -0.83
NUP50-203ENST00000407019 NOTCH2NLQ7Z3S9 236 aa9.89□□□□□ -0.83
NUP50-203ENST00000407019 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
NUP50-203ENST00000407019 Q1T7F1 81 aa9.86□□□□□ -0.83
NUP50-203ENST00000407019 PCOTHQ58A44 107 aa9.83□□□□□ -0.84
NUP50-203ENST00000407019 IGLV7-46A0A075B6I9 117 aa9.83□□□□□ -0.84
NUP50-203ENST00000407019 PRO0628Q9UI54 55 aa9.81□□□□□ -0.84
NUP50-203ENST00000407019 KRTAP13-2Q52LG2 175 aa9.79□□□□□ -0.84
NUP50-203ENST00000407019 C8orf87E5RJ46 101 aa9.78□□□□□ -0.84
NUP50-203ENST00000407019 PKD1P98161 4303 aa9.76□□□□□ -0.85
NUP50-203ENST00000407019 FAT2Q9NYQ8 4349 aa9.76□□□□□ -0.85
NUP50-203ENST00000407019 BRK1Q8WUW1 75 aa9.76□□□□□ -0.85
NUP50-203ENST00000407019 V9GYY9 64 aa9.76□□□□□ -0.85
NUP50-203ENST00000407019 HYDINQ4G0P3 5121 aa9.74□□□□□ -0.85
NUP50-203ENST00000407019 COA5Q86WW8 74 aa9.74□□□□□ -0.85
NUP50-203ENST00000407019 LRP1BQ9NZR2 4599 aa9.74□□□□□ -0.85
NUP50-203ENST00000407019 LOC101927531A0A1B0GV80 90 aa9.73□□□□□ -0.85
NUP50-203ENST00000407019 KRTAP21-3Q3LHN1 58 aa9.73□□□□□ -0.85
NUP50-203ENST00000407019 KRTAP1-4P0C5Y4 121 aa9.71□□□□□ -0.85
NUP50-203ENST00000407019 Q5W150 140 aa9.71□□□□□ -0.85
NUP50-203ENST00000407019 PSPHP1O15172 72 aa9.71□□□□□ -0.86
NUP50-203ENST00000407019 KRTAP13-3Q3SY46 172 aa9.71□□□□□ -0.86
NUP50-203ENST00000407019 C1orf195Q5TG92 126 aa9.71□□□□□ -0.86
NUP50-203ENST00000407019 LINC00313P59037 77 aa9.7□□□□□ -0.86
NUP50-203ENST00000407019 Q8N9P0 234 aaPredicted RBP9.67□□□□□ -0.86
NUP50-203ENST00000407019 LIMD2Q9BT23 127 aa9.67□□□□□ -0.86
NUP50-203ENST00000407019 A8MUN3 132 aa9.65□□□□□ -0.86
NUP50-203ENST00000407019 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
NUP50-203ENST00000407019 FAM229AH3BQW9 127 aa9.61□□□□□ -0.87
NUP50-203ENST00000407019 HRES1P13985 223 aa9.6□□□□□ -0.87
NUP50-203ENST00000407019 C4orf48Q5BLP8 95 aa9.6□□□□□ -0.87
NUP50-203ENST00000407019 Q5VV11 94 aa9.6□□□□□ -0.87
NUP50-203ENST00000407019 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
NUP50-203ENST00000407019 KRTAP16-1A8MUX0 517 aa9.58□□□□□ -0.88
NUP50-203ENST00000407019 PRR15LQ9BU68 103 aa9.57□□□□□ -0.88
NUP50-203ENST00000407019 VPS13BQ7Z7G8 4022 aa9.57□□□□□ -0.88
NUP50-203ENST00000407019 SPINK1P00995 79 aa9.55□□□□□ -0.88
NUP50-203ENST00000407019 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
NUP50-203ENST00000407019 SACSQ9NZJ4 4579 aa9.53□□□□□ -0.88
NUP50-203ENST00000407019 IGKV2-30P06310 120 aa9.52□□□□□ -0.89
NUP50-203ENST00000407019 CHKB-CPT1BH3BT56 60 aa9.51□□□□□ -0.89
NUP50-203ENST00000407019 SPAG11AQ6PDA7 123 aa9.5□□□□□ -0.89
NUP50-203ENST00000407019 LINC01558Q9Y6Z2 57 aa9.5□□□□□ -0.89
NUP50-203ENST00000407019 Q75L30 129 aa9.49□□□□□ -0.89
NUP50-203ENST00000407019 ACYP2P14621 99 aa9.49□□□□□ -0.89
NUP50-203ENST00000407019 PRR26Q8N8Z3 221 aa9.47□□□□□ -0.89
NUP50-203ENST00000407019 LINC00304Q8N9R0 145 aa9.47□□□□□ -0.89
NUP50-203ENST00000407019 DMAC1Q96GE9 116 aa9.47□□□□□ -0.89
NUP50-203ENST00000407019 RPS29P62273 56 aaKnown RBP9.46□□□□□ -0.9
NUP50-203ENST00000407019 PKHD1P08F94 4074 aa9.45□□□□□ -0.9
NUP50-203ENST00000407019 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
NUP50-203ENST00000407019 DYNC1H1Q14204 4646 aaKnown RBP9.42□□□□□ -0.9
NUP50-203ENST00000407019 A0A1B0GVY2 172 aa9.42□□□□□ -0.9
NUP50-203ENST00000407019 IGKV2D-30A0A075B6S6 120 aa9.39□□□□□ -0.91
NUP50-203ENST00000407019 A6NED7 52 aa9.39□□□□□ -0.91
NUP50-203ENST00000407019 A8MU10 97 aa9.37□□□□□ -0.91
NUP50-203ENST00000407019 KRTAP10-4P60372 401 aaPredicted RBP9.33□□□□□ -0.92
NUP50-203ENST00000407019 LCA10Q71F78 164 aa9.32□□□□□ -0.92
NUP50-203ENST00000407019 APOBP04114 4563 aaKnown RBP9.31□□□□□ -0.92
NUP50-203ENST00000407019 CDC42SE1Q9NRR8 79 aa9.28□□□□□ -0.92
NUP50-203ENST00000407019 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
NUP50-203ENST00000407019 SPINK7P58062 85 aa9.26□□□□□ -0.93
NUP50-203ENST00000407019 FAT1Q14517 4588 aa9.26□□□□□ -0.93
NUP50-203ENST00000407019 PKHD1L1Q86WI1 4243 aa9.25□□□□□ -0.93
NUP50-203ENST00000407019 RYR2Q92736 4967 aa9.23□□□□□ -0.93
NUP50-203ENST00000407019 ATP11AUNQ6ZP68 121 aa9.23□□□□□ -0.93
NUP50-203ENST00000407019 SPTSSBQ8NFR3 76 aa9.22□□□□□ -0.93
NUP50-203ENST00000407019 C9orf92A6NGG3 77 aa9.22□□□□□ -0.93
NUP50-203ENST00000407019 PMAIP1Q13794 54 aa9.22□□□□□ -0.93
NUP50-203ENST00000407019 C20orf166-AS1Q96NR2 134 aa9.2□□□□□ -0.94
NUP50-203ENST00000407019 A8MUU9 505 aa9.2□□□□□ -0.94
NUP50-203ENST00000407019 A0A1B0GU69 56 aa9.19□□□□□ -0.94
NUP50-203ENST00000407019 Q8N1X5 172 aa9.14□□□□□ -0.95
NUP50-203ENST00000407019 A6NN06 94 aa9.08□□□□□ -0.96
NUP50-203ENST00000407019 KMT2CQ8NEZ4 4911 aaKnown RBP9.06□□□□□ -0.96
NUP50-203ENST00000407019 UQCR11O14957 56 aa9□□□□□ -0.97
NUP50-203ENST00000407019 KTN1-AS1Q86SY8 53 aa9□□□□□ -0.97
NUP50-203ENST00000407019 Q5VSD8 79 aa9□□□□□ -0.97
NUP50-203ENST00000407019 SPATA8Q6RVD6 105 aa9□□□□□ -0.97
NUP50-203ENST00000407019 FLG2Q5D862 2391 aaPredicted RBP8.98□□□□□ -0.97
NUP50-203ENST00000407019 KRTAP10-8P60410 259 aa8.98□□□□□ -0.97
NUP50-203ENST00000407019 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.97
NUP50-203ENST00000407019 KRTAP3-1Q9BYR8 98 aa8.96□□□□□ -0.98
NUP50-203ENST00000407019 SEC61GP60059 68 aa8.95□□□□□ -0.98
NUP50-203ENST00000407019 FAT3Q8TDW7 4589 aa8.94□□□□□ -0.98
NUP50-203ENST00000407019 HSPG2P98160 4391 aa8.92□□□□□ -0.98
NUP50-203ENST00000407019 TNXBP22105 4242 aa8.92□□□□□ -0.98
NUP50-203ENST00000407019 LRP1Q07954 4544 aaKnown RBP8.88□□□□□ -0.99
NUP50-203ENST00000407019 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
NUP50-203ENST00000407019 RYR1P21817 5038 aa8.83□□□□□ -1
NUP50-203ENST00000407019 RPL37P61927 97 aaKnown RBP8.82□□□□□ -1
NUP50-203ENST00000407019 RYR3Q15413 4870 aa8.8□□□□□ -1
NUP50-203ENST00000407019 XP32Q5T750 250 aa8.78□□□□□ -1
NUP50-203ENST00000407019 KRTAP17-1Q9BYP8 105 aa8.77□□□□□ -1
NUP50-203ENST00000407019 MT1HL1P0DM35 61 aa8.72□□□□□ -1.01
NUP50-203ENST00000407019 A0A1B0GU33 70 aa8.71□□□□□ -1.01
NUP50-203ENST00000407019 H0YAA0 97 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms