RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 RPS29P62273 56 aaKnown RBP2.9□□□□□ -1.94
HDAC9-204ENST00000406451 H3BS24 57 aa2.89□□□□□ -1.95
HDAC9-204ENST00000406451 SPEGQ15772 3267 aa2.89□□□□□ -1.95
HDAC9-204ENST00000406451 DMAC1Q96GE9 116 aa2.88□□□□□ -1.95
HDAC9-204ENST00000406451 TENM2Q9NT68 2774 aa2.88□□□□□ -1.95
HDAC9-204ENST00000406451 KRTAP11-1Q8IUC1 163 aa2.87□□□□□ -1.95
HDAC9-204ENST00000406451 VWFP04275 2813 aa2.87□□□□□ -1.95
HDAC9-204ENST00000406451 Q1T7F1 81 aa2.87□□□□□ -1.95
HDAC9-204ENST00000406451 M0QZ58 72 aa2.85□□□□□ -1.95
HDAC9-204ENST00000406451 SRRM2Q9UQ35 2752 aaKnown RBP2.85□□□□□ -1.95
HDAC9-204ENST00000406451 CELSR1Q9NYQ6 3014 aa2.85□□□□□ -1.95
HDAC9-204ENST00000406451 KRTAP13-2Q52LG2 175 aa2.85□□□□□ -1.95
HDAC9-204ENST00000406451 PDZD2O15018 2839 aa2.85□□□□□ -1.95
HDAC9-204ENST00000406451 LCA10Q71F78 164 aa2.84□□□□□ -1.95
HDAC9-204ENST00000406451 Q75L30 129 aa2.84□□□□□ -1.95
HDAC9-204ENST00000406451 KRTAP7-1Q8IUC3 87 aa2.84□□□□□ -1.96
HDAC9-204ENST00000406451 PLAC4Q8WY50 150 aa2.84□□□□□ -1.96
HDAC9-204ENST00000406451 LINC01558Q9Y6Z2 57 aa2.84□□□□□ -1.96
HDAC9-204ENST00000406451 LOC400499M0QZD8 3231 aa2.83□□□□□ -1.96
HDAC9-204ENST00000406451 KRTAP13-1Q8IUC0 172 aa2.83□□□□□ -1.96
HDAC9-204ENST00000406451 TGP01266 2768 aa2.83□□□□□ -1.96
HDAC9-204ENST00000406451 H1FX-AS1Q4G0G2 97 aa2.83□□□□□ -1.96
HDAC9-204ENST00000406451 Q5XG85 94 aa2.83□□□□□ -1.96
HDAC9-204ENST00000406451 ADM2Q7Z4H4 148 aa2.83□□□□□ -1.96
HDAC9-204ENST00000406451 KTN1-AS1Q86SY8 53 aa2.82□□□□□ -1.96
HDAC9-204ENST00000406451 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
HDAC9-204ENST00000406451 NOTCH2NLQ7Z3S9 236 aa2.81□□□□□ -1.96
HDAC9-204ENST00000406451 KRTAP29-1A8MX34 341 aaPredicted RBP2.81□□□□□ -1.96
HDAC9-204ENST00000406451 MYO15AQ9UKN7 3530 aa2.8□□□□□ -1.96
HDAC9-204ENST00000406451 RPL37P61927 97 aaKnown RBP2.8□□□□□ -1.96
HDAC9-204ENST00000406451 C20orf166-AS1Q96NR2 134 aa2.78□□□□□ -1.96
HDAC9-204ENST00000406451 FBN1P35555 2871 aaKnown RBP2.78□□□□□ -1.96
HDAC9-204ENST00000406451 DCHS1Q96JQ0 3298 aa2.77□□□□□ -1.97
HDAC9-204ENST00000406451 CYSTM1Q9H1C7 97 aa2.77□□□□□ -1.97
HDAC9-204ENST00000406451 NBPF19A0A087WUL8 3843 aa2.76□□□□□ -1.97
HDAC9-204ENST00000406451 Q5VV11 94 aa2.76□□□□□ -1.97
HDAC9-204ENST00000406451 A8MUU9 505 aa2.75□□□□□ -1.97
HDAC9-204ENST00000406451 OTOGQ6ZRI0 2925 aa2.74□□□□□ -1.97
HDAC9-204ENST00000406451 ZFHX3Q15911 3703 aa2.74□□□□□ -1.97
HDAC9-204ENST00000406451 SPATA8Q6RVD6 105 aa2.74□□□□□ -1.97
HDAC9-204ENST00000406451 ROMO1P60602 79 aa2.74□□□□□ -1.97
HDAC9-204ENST00000406451 KRTAP1-4P0C5Y4 121 aa2.73□□□□□ -1.97
HDAC9-204ENST00000406451 TPRXLQ17RH7 258 aa2.71□□□□□ -1.97
HDAC9-204ENST00000406451 XP32Q5T750 250 aa2.71□□□□□ -1.97
HDAC9-204ENST00000406451 RELNP78509 3460 aa2.7□□□□□ -1.98
HDAC9-204ENST00000406451 WDFY3Q8IZQ1 3526 aa2.7□□□□□ -1.98
HDAC9-204ENST00000406451 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
HDAC9-204ENST00000406451 LAMA5O15230 3695 aa2.69□□□□□ -1.98
HDAC9-204ENST00000406451 PRAC1Q96KF2 57 aa2.68□□□□□ -1.98
HDAC9-204ENST00000406451 A0A1B0GVY2 172 aa2.68□□□□□ -1.98
HDAC9-204ENST00000406451 COL7A1Q02388 2944 aa2.66□□□□□ -1.98
HDAC9-204ENST00000406451 RYR1P21817 5038 aa2.65□□□□□ -1.98
HDAC9-204ENST00000406451 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
HDAC9-204ENST00000406451 A8MU10 97 aa2.64□□□□□ -1.99
HDAC9-204ENST00000406451 ASPMQ8IZT6 3477 aa2.64□□□□□ -1.99
HDAC9-204ENST00000406451 KRTAP16-1A8MUX0 517 aa2.63□□□□□ -1.99
HDAC9-204ENST00000406451 TNP1P09430 55 aa2.62□□□□□ -1.99
HDAC9-204ENST00000406451 KRTAP10-10P60014 251 aa2.62□□□□□ -1.99
HDAC9-204ENST00000406451 DMDP11532 3685 aa2.62□□□□□ -1.99
HDAC9-204ENST00000406451 FBN3Q75N90 2809 aa2.61□□□□□ -1.99
HDAC9-204ENST00000406451 KRTAP10-8P60410 259 aa2.61□□□□□ -1.99
HDAC9-204ENST00000406451 MEGF8Q7Z7M0 2845 aa2.61□□□□□ -1.99
HDAC9-204ENST00000406451 SMG1Q96Q15 3661 aaKnown RBP2.58□□□□□ -2
HDAC9-204ENST00000406451 SPENQ96T58 3664 aaKnown RBP2.57□□□□□ -2
HDAC9-204ENST00000406451 PRO2289Q9P1D8 64 aa2.57□□□□□ -2
HDAC9-204ENST00000406451 MUC3AQ02505 3323 aa2.57□□□□□ -2
HDAC9-204ENST00000406451 ZFHX4Q86UP3 3567 aa2.57□□□□□ -2
HDAC9-204ENST00000406451 A6NN06 94 aa2.56□□□□□ -2
HDAC9-204ENST00000406451 TRRAPQ9Y4A5 3859 aa2.55□□□□□ -2
HDAC9-204ENST00000406451 CSMD1Q96PZ7 3565 aa2.54□□□□□ -2
HDAC9-204ENST00000406451 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
HDAC9-204ENST00000406451 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
HDAC9-204ENST00000406451 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
HDAC9-204ENST00000406451 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
HDAC9-204ENST00000406451 P0C880 135 aa2.49□□□□□ -2.01
HDAC9-204ENST00000406451 CSMD2Q7Z408 3487 aa2.48□□□□□ -2.01
HDAC9-204ENST00000406451 H0YAA0 97 aa2.48□□□□□ -2.01
HDAC9-204ENST00000406451 ANK3Q12955 4377 aaKnown RBP2.43□□□□□ -2.02
HDAC9-204ENST00000406451 SVEP1Q4LDE5 3571 aa2.43□□□□□ -2.02
HDAC9-204ENST00000406451 BSNQ9UPA5 3926 aa2.42□□□□□ -2.02
HDAC9-204ENST00000406451 MT1HL1P0DM35 61 aa2.42□□□□□ -2.02
HDAC9-204ENST00000406451 VPS13CQ709C8 3753 aa2.42□□□□□ -2.02
HDAC9-204ENST00000406451 KRTAP4-5Q9BYR2 181 aa2.39□□□□□ -2.03
HDAC9-204ENST00000406451 CUBNO60494 3623 aa2.38□□□□□ -2.03
HDAC9-204ENST00000406451 KRTAP12-2P59991 146 aa2.36□□□□□ -2.03
HDAC9-204ENST00000406451 ALMS1Q8TCU4 4167 aa2.35□□□□□ -2.03
HDAC9-204ENST00000406451 KRTAP10-4P60372 401 aaPredicted RBP2.35□□□□□ -2.03
HDAC9-204ENST00000406451 KRTAP3-1Q9BYR8 98 aa2.35□□□□□ -2.03
HDAC9-204ENST00000406451 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
HDAC9-204ENST00000406451 AKAP9Q99996 3911 aa2.34□□□□□ -2.03
HDAC9-204ENST00000406451 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
HDAC9-204ENST00000406451 ZNF469Q96JG9 3925 aaPredicted RBP2.31□□□□□ -2.04
HDAC9-204ENST00000406451 KRTAP23-1A1A580 65 aa2.3□□□□□ -2.04
HDAC9-204ENST00000406451 DNAH10Q8IVF4 4471 aa2.29□□□□□ -2.04
HDAC9-204ENST00000406451 HUWE1Q7Z6Z7 4374 aaKnown RBP2.27□□□□□ -2.05
HDAC9-204ENST00000406451 KRTAP10-6P60371 365 aaPredicted RBP2.27□□□□□ -2.05
HDAC9-204ENST00000406451 KRTAP15-1Q3LI76 137 aa2.26□□□□□ -2.05
HDAC9-204ENST00000406451 HERC1Q15751 4861 aa2.25□□□□□ -2.05
HDAC9-204ENST00000406451 CSMD3Q7Z407 3707 aa2.24□□□□□ -2.05
HDAC9-204ENST00000406451 PLECQ15149 4684 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms