RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 UBE2DNLQ8IWF7 75 aa2.22□□□□□ -2.05
HMGB3P18-201ENST00000406327 PKIGQ9Y2B9 76 aa2.22□□□□□ -2.05
HMGB3P18-201ENST00000406327 IGLV5-48A0A075B6I7 105 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 A0A087WVE0 104 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 A0A096LNI7 61 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 NUPR2A6NF83 97 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 UQCRQO14949 82 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 COX7CP15954 63 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 HAMPP81172 84 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 DEFB105AQ8NG35 78 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 NBDYA0A0U1RRE5 68 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 BCE1O60756 84 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 ERC2-IT1O76042 136 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 TMEM258P61165 79 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 SERP2Q8N6R1 65 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 TRAV7A0A075B6U4 112 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 CRYGAP11844 174 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 UBE2BP63146 152 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 NREPQ16612 68 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 C9orf153Q5TBE3 101 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 Q6ZRN7 208 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 C9orf163Q8N9P6 203 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 PRO2289Q9P1D8 64 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 SS18L2Q9UHA2 77 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 PKD1L1Q8TDX9 2849 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 TRRAPQ9Y4A5 3859 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 MAST4O15021 2626 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 BAHCC1Q9P281 2608 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 FLNBO75369 2602 aaKnown RBP2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 C1orf137Q5JT78 98 aa2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 ZCCHC13Q8WW36 166 aaKnown RBP2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 SPRR4Q96PI1 79 aa2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 LINC00474Q9P2X8 69 aa2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 STAB1Q9NY15 2570 aa2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 TENM3Q9P273 2699 aa2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 PRLHP81277 87 aa2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 PHF5AQ7RTV0 110 aaKnown RBP2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 SMIM20Q8N5G0 67 aa2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 A0A087WTM6 91 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 F8WEM9 126 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 SPRR1BP22528 89 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 DPH3Q96FX2 82 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 CYSTM1Q9H1C7 97 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 FAM236DA0A1B0GTK5 79 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 FAM236CP0DP71 79 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 KTN1-AS1Q86SY8 53 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 SPACA4Q8TDM5 124 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 COL6A5A8TX70 2615 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 A0A0G2JQZ4 141 aa2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 RPS28P62857 69 aaKnown RBP2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 C20orf197Q8N268 126 aa2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 DNAH3Q8TD57 4116 aa2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 A0A087WSZ3 146 aa2.13□□□□□ -2.07
HMGB3P18-201ENST00000406327 KLKP1Q107X0 134 aa2.13□□□□□ -2.07
HMGB3P18-201ENST00000406327 C1orf134Q5TEV5 83 aa2.13□□□□□ -2.07
HMGB3P18-201ENST00000406327 NOTCH1P46531 2555 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 NBEAL1Q6ZS30 2694 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 H7BZZ5 65 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 K7EQZ3 153 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 PLAC8Q9NZF1 115 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 MGAM2Q2M2H8 2515 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 LCE6AA0A183 80 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 HCG22E2RYF7 251 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 J3KT08 172 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 NDUFC1O43677 76 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 LY6G6CO95867 125 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 RPL37AP61513 92 aaKnown RBP2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 KRTAP21-3Q3LHN1 58 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 TMEM254Q8TBM7 123 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 LINC00472Q9H8W2 130 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 HUWE1Q7Z6Z7 4374 aaKnown RBP2.1□□□□□ -2.07
HMGB3P18-201ENST00000406327 COL7A1Q02388 2944 aa2.1□□□□□ -2.07
HMGB3P18-201ENST00000406327 PRR15Q8IV56 129 aa2.1□□□□□ -2.07
HMGB3P18-201ENST00000406327 CMYA5Q8N3K9 4069 aa2.1□□□□□ -2.07
HMGB3P18-201ENST00000406327 ANK2Q01484 3957 aa2.09□□□□□ -2.08
HMGB3P18-201ENST00000406327 MEGF8Q7Z7M0 2845 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 ATP5EP56381 51 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 CASC2Q6XLA1 102 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 WFDC13Q8IUB5 93 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 Q96NJ1 140 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 SERP1Q9Y6X1 66 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 STAB2Q8WWQ8 2551 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 DNAH1Q9P2D7 4330 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 NDUFB1O75438 58 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 TPRXLQ17RH7 258 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 HRCT1Q6UXD1 115 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 MMP24-AS1A0A0U1RRL7 71 aa2.06□□□□□ -2.08
HMGB3P18-201ENST00000406327 ASB16-AS1Q495Z4 193 aa2.06□□□□□ -2.08
HMGB3P18-201ENST00000406327 Q6ZSA8 131 aa2.06□□□□□ -2.08
HMGB3P18-201ENST00000406327 SSBP3-AS1Q7Z2R9 100 aa2.06□□□□□ -2.08
HMGB3P18-201ENST00000406327 hDV103S1A0JD37 113 aa2.05□□□□□ -2.08
HMGB3P18-201ENST00000406327 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
HMGB3P18-201ENST00000406327 Q5XG85 94 aa2.05□□□□□ -2.08
HMGB3P18-201ENST00000406327 DNAH9Q9NYC9 4486 aa2.05□□□□□ -2.08
HMGB3P18-201ENST00000406327 H0Y9P7 68 aa2.04□□□□□ -2.08
HMGB3P18-201ENST00000406327 LCA10Q71F78 164 aa2.04□□□□□ -2.08
HMGB3P18-201ENST00000406327 DYNC2H1Q8NCM8 4307 aaKnown RBP2.04□□□□□ -2.08
HMGB3P18-201ENST00000406327 LINC00208Q96KT6 92 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms