RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 UBE2DNLQ8IWF7 75 aa2.22□□□□□ -2.05
HMGB3P18-201ENST00000406327 PKIGQ9Y2B9 76 aa2.22□□□□□ -2.05
HMGB3P18-201ENST00000406327 IGLV5-48A0A075B6I7 105 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 A0A087WVE0 104 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 A0A096LNI7 61 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 NUPR2A6NF83 97 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 UQCRQO14949 82 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 COX7CP15954 63 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 HAMPP81172 84 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 DEFB105AQ8NG35 78 aa2.21□□□□□ -2.06
HMGB3P18-201ENST00000406327 NBDYA0A0U1RRE5 68 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 BCE1O60756 84 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 ERC2-IT1O76042 136 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 TMEM258P61165 79 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 SERP2Q8N6R1 65 aa2.2□□□□□ -2.06
HMGB3P18-201ENST00000406327 TRAV7A0A075B6U4 112 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 CRYGAP11844 174 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 UBE2BP63146 152 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 NREPQ16612 68 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 C9orf153Q5TBE3 101 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 Q6ZRN7 208 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 C9orf163Q8N9P6 203 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 PRO2289Q9P1D8 64 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 SS18L2Q9UHA2 77 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 PKD1L1Q8TDX9 2849 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 TRRAPQ9Y4A5 3859 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 MAST4O15021 2626 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 BAHCC1Q9P281 2608 aa2.19□□□□□ -2.06
HMGB3P18-201ENST00000406327 FLNBO75369 2602 aaKnown RBP2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 C1orf137Q5JT78 98 aa2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 ZCCHC13Q8WW36 166 aaKnown RBP2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 SPRR4Q96PI1 79 aa2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 LINC00474Q9P2X8 69 aa2.18□□□□□ -2.06
HMGB3P18-201ENST00000406327 STAB1Q9NY15 2570 aa2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 TENM3Q9P273 2699 aa2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 PRLHP81277 87 aa2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 PHF5AQ7RTV0 110 aaKnown RBP2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 SMIM20Q8N5G0 67 aa2.17□□□□□ -2.06
HMGB3P18-201ENST00000406327 A0A087WTM6 91 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 F8WEM9 126 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 SPRR1BP22528 89 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 DPH3Q96FX2 82 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 CYSTM1Q9H1C7 97 aa2.16□□□□□ -2.06
HMGB3P18-201ENST00000406327 FAM236DA0A1B0GTK5 79 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 FAM236CP0DP71 79 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 KTN1-AS1Q86SY8 53 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 SPACA4Q8TDM5 124 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 COL6A5A8TX70 2615 aa2.15□□□□□ -2.07
HMGB3P18-201ENST00000406327 A0A0G2JQZ4 141 aa2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 RPS28P62857 69 aaKnown RBP2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 C20orf197Q8N268 126 aa2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 DNAH3Q8TD57 4116 aa2.14□□□□□ -2.07
HMGB3P18-201ENST00000406327 A0A087WSZ3 146 aa2.13□□□□□ -2.07
HMGB3P18-201ENST00000406327 KLKP1Q107X0 134 aa2.13□□□□□ -2.07
HMGB3P18-201ENST00000406327 C1orf134Q5TEV5 83 aa2.13□□□□□ -2.07
HMGB3P18-201ENST00000406327 NOTCH1P46531 2555 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 NBEAL1Q6ZS30 2694 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 H7BZZ5 65 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 K7EQZ3 153 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 PLAC8Q9NZF1 115 aa2.12□□□□□ -2.07
HMGB3P18-201ENST00000406327 MGAM2Q2M2H8 2515 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 LCE6AA0A183 80 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 HCG22E2RYF7 251 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 J3KT08 172 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 NDUFC1O43677 76 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 LY6G6CO95867 125 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 RPL37AP61513 92 aaKnown RBP2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 KRTAP21-3Q3LHN1 58 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 TMEM254Q8TBM7 123 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 LINC00472Q9H8W2 130 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
HMGB3P18-201ENST00000406327 HUWE1Q7Z6Z7 4374 aaKnown RBP2.1□□□□□ -2.07
HMGB3P18-201ENST00000406327 COL7A1Q02388 2944 aa2.1□□□□□ -2.07
HMGB3P18-201ENST00000406327 PRR15Q8IV56 129 aa2.1□□□□□ -2.07
HMGB3P18-201ENST00000406327 CMYA5Q8N3K9 4069 aa2.1□□□□□ -2.07
HMGB3P18-201ENST00000406327 ANK2Q01484 3957 aa2.09□□□□□ -2.08
HMGB3P18-201ENST00000406327 MEGF8Q7Z7M0 2845 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 ATP5EP56381 51 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 CASC2Q6XLA1 102 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 WFDC13Q8IUB5 93 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 Q96NJ1 140 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 SERP1Q9Y6X1 66 aa2.08□□□□□ -2.08
HMGB3P18-201ENST00000406327 STAB2Q8WWQ8 2551 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 DNAH1Q9P2D7 4330 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 NDUFB1O75438 58 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 TPRXLQ17RH7 258 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 HRCT1Q6UXD1 115 aa2.07□□□□□ -2.08
HMGB3P18-201ENST00000406327 MMP24-AS1A0A0U1RRL7 71 aa2.06□□□□□ -2.08
HMGB3P18-201ENST00000406327 ASB16-AS1Q495Z4 193 aa2.06□□□□□ -2.08
HMGB3P18-201ENST00000406327 Q6ZSA8 131 aa2.06□□□□□ -2.08
HMGB3P18-201ENST00000406327 SSBP3-AS1Q7Z2R9 100 aa2.06□□□□□ -2.08
HMGB3P18-201ENST00000406327 hDV103S1A0JD37 113 aa2.05□□□□□ -2.08
HMGB3P18-201ENST00000406327 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
HMGB3P18-201ENST00000406327 Q5XG85 94 aa2.05□□□□□ -2.08
HMGB3P18-201ENST00000406327 DNAH9Q9NYC9 4486 aa2.05□□□□□ -2.08
HMGB3P18-201ENST00000406327 H0Y9P7 68 aa2.04□□□□□ -2.08
HMGB3P18-201ENST00000406327 LCA10Q71F78 164 aa2.04□□□□□ -2.08
HMGB3P18-201ENST00000406327 DYNC2H1Q8NCM8 4307 aaKnown RBP2.04□□□□□ -2.08
HMGB3P18-201ENST00000406327 LINC00208Q96KT6 92 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms