RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 FP248Q71RG6 208 aaPredicted RBP9.32□□□□□ -0.92
CGREF1-205ENST00000404694 HIST1H4AP62805 103 aaKnown RBP9.29□□□□□ -0.92
CGREF1-205ENST00000404694 MUC2Q02817 5179 aa9.29□□□□□ -0.92
CGREF1-205ENST00000404694 J3KT08 172 aa9.26□□□□□ -0.93
CGREF1-205ENST00000404694 LINC00472Q9H8W2 130 aa9.26□□□□□ -0.93
CGREF1-205ENST00000404694 KRTAP13-3Q3SY46 172 aa9.24□□□□□ -0.93
CGREF1-205ENST00000404694 MUC17Q685J3 4493 aa9.23□□□□□ -0.93
CGREF1-205ENST00000404694 FAM236AA0A1B0GUQ0 79 aa9.23□□□□□ -0.93
CGREF1-205ENST00000404694 FAM236BA0A1B0GV22 79 aa9.23□□□□□ -0.93
CGREF1-205ENST00000404694 Q96NJ1 140 aa9.22□□□□□ -0.93
CGREF1-205ENST00000404694 A0A087WVE0 104 aa9.21□□□□□ -0.94
CGREF1-205ENST00000404694 IGKV4-1P06312 121 aa9.21□□□□□ -0.94
CGREF1-205ENST00000404694 DSCR10P59022 87 aa9.21□□□□□ -0.94
CGREF1-205ENST00000404694 PCP4P48539 62 aa9.18□□□□□ -0.94
CGREF1-205ENST00000404694 A8MWP4 228 aa9.17□□□□□ -0.94
CGREF1-205ENST00000404694 ATOX1O00244 68 aa9.17□□□□□ -0.94
CGREF1-205ENST00000404694 C1orf195Q5TG92 126 aa9.17□□□□□ -0.94
CGREF1-205ENST00000404694 NDUFB1O75438 58 aa9.16□□□□□ -0.94
CGREF1-205ENST00000404694 DEFB116Q30KQ4 102 aa9.15□□□□□ -0.94
CGREF1-205ENST00000404694 Q8N9L7 120 aa9.15□□□□□ -0.94
CGREF1-205ENST00000404694 K7EQZ3 153 aa9.14□□□□□ -0.95
CGREF1-205ENST00000404694 ANAPC13Q9BS18 74 aa9.14□□□□□ -0.95
CGREF1-205ENST00000404694 PRR15Q8IV56 129 aa9.13□□□□□ -0.95
CGREF1-205ENST00000404694 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
CGREF1-205ENST00000404694 SMIM20Q8N5G0 67 aa9.12□□□□□ -0.95
CGREF1-205ENST00000404694 A0A1B0GVX0 72 aa9.08□□□□□ -0.96
CGREF1-205ENST00000404694 HCG22E2RYF7 251 aa9.08□□□□□ -0.96
CGREF1-205ENST00000404694 XP32Q5T750 250 aa9.06□□□□□ -0.96
CGREF1-205ENST00000404694 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
CGREF1-205ENST00000404694 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
CGREF1-205ENST00000404694 SERP2Q8N6R1 65 aa9.04□□□□□ -0.96
CGREF1-205ENST00000404694 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
CGREF1-205ENST00000404694 TRAV7A0A075B6U4 112 aa9.01□□□□□ -0.97
CGREF1-205ENST00000404694 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
CGREF1-205ENST00000404694 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
CGREF1-205ENST00000404694 C9orf92A6NGG3 77 aa8.99□□□□□ -0.97
CGREF1-205ENST00000404694 COX7CP15954 63 aa8.99□□□□□ -0.97
CGREF1-205ENST00000404694 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
CGREF1-205ENST00000404694 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
CGREF1-205ENST00000404694 UQCRQO14949 82 aa8.99□□□□□ -0.97
CGREF1-205ENST00000404694 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
CGREF1-205ENST00000404694 KRTAP4-1Q9BYQ7 146 aa8.99□□□□□ -0.97
CGREF1-205ENST00000404694 hDV103S1A0JD37 113 aa8.98□□□□□ -0.97
CGREF1-205ENST00000404694 LINC00313P59037 77 aa8.98□□□□□ -0.97
CGREF1-205ENST00000404694 OCR1Q9BZK8 76 aa8.96□□□□□ -0.98
CGREF1-205ENST00000404694 LCE2AQ5TA79 106 aaPredicted RBP8.95□□□□□ -0.98
CGREF1-205ENST00000404694 TMEM254Q8TBM7 123 aa8.94□□□□□ -0.98
CGREF1-205ENST00000404694 KRTAP9-2Q9BYQ4 174 aa8.93□□□□□ -0.98
CGREF1-205ENST00000404694 KRTAP9-6A0A140TA67 174 aa8.92□□□□□ -0.98
CGREF1-205ENST00000404694 NOTCH2NLQ7Z3S9 236 aa8.9□□□□□ -0.98
CGREF1-205ENST00000404694 MRPL34Q9BQ48 92 aaKnown RBP8.9□□□□□ -0.98
CGREF1-205ENST00000404694 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
CGREF1-205ENST00000404694 CCDC179H3BU77 68 aa8.88□□□□□ -0.99
CGREF1-205ENST00000404694 PCOTHQ58A44 107 aa8.88□□□□□ -0.99
CGREF1-205ENST00000404694 C5orf47Q569G3 176 aa8.86□□□□□ -0.99
CGREF1-205ENST00000404694 KRTAP16-1A8MUX0 517 aa8.86□□□□□ -0.99
CGREF1-205ENST00000404694 Q8N9P0 234 aaPredicted RBP8.85□□□□□ -0.99
CGREF1-205ENST00000404694 RPL37P61927 97 aaKnown RBP8.83□□□□□ -1
CGREF1-205ENST00000404694 C20orf197Q8N268 126 aa8.82□□□□□ -1
CGREF1-205ENST00000404694 NDUFS5O43920 106 aa8.81□□□□□ -1
CGREF1-205ENST00000404694 MP68P56378 58 aa8.8□□□□□ -1
CGREF1-205ENST00000404694 KLKP1Q107X0 134 aa8.8□□□□□ -1
CGREF1-205ENST00000404694 H3BPC8 53 aa8.79□□□□□ -1
CGREF1-205ENST00000404694 C20orf166-AS1Q96NR2 134 aa8.79□□□□□ -1
CGREF1-205ENST00000404694 A8MUU9 505 aa8.77□□□□□ -1.01
CGREF1-205ENST00000404694 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
CGREF1-205ENST00000404694 NDUFC1O43677 76 aa8.75□□□□□ -1.01
CGREF1-205ENST00000404694 Q75L30 129 aa8.75□□□□□ -1.01
CGREF1-205ENST00000404694 H0Y9P7 68 aa8.74□□□□□ -1.01
CGREF1-205ENST00000404694 KRTAP19-2Q3LHN2 52 aa8.73□□□□□ -1.01
CGREF1-205ENST00000404694 LCE2CQ5TA81 110 aa8.73□□□□□ -1.01
CGREF1-205ENST00000404694 SNURFQ9Y675 71 aa8.72□□□□□ -1.01
CGREF1-205ENST00000404694 ZCCHC13Q8WW36 166 aaKnown RBP8.69□□□□□ -1.02
CGREF1-205ENST00000404694 LINC00208Q96KT6 92 aa8.69□□□□□ -1.02
CGREF1-205ENST00000404694 C1orf64Q8NEQ6 169 aa8.66□□□□□ -1.02
CGREF1-205ENST00000404694 H7BZZ5 65 aa8.65□□□□□ -1.02
CGREF1-205ENST00000404694 TMEM258P61165 79 aa8.65□□□□□ -1.02
CGREF1-205ENST00000404694 ATP11AUNQ6ZP68 121 aa8.65□□□□□ -1.02
CGREF1-205ENST00000404694 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.02
CGREF1-205ENST00000404694 LOC101927531A0A1B0GV80 90 aa8.62□□□□□ -1.03
CGREF1-205ENST00000404694 MT1HP80294 61 aa8.62□□□□□ -1.03
CGREF1-205ENST00000404694 Q5W150 140 aa8.62□□□□□ -1.03
CGREF1-205ENST00000404694 ATP5EP56381 51 aaPredicted RBP8.57□□□□□ -1.04
CGREF1-205ENST00000404694 COX6B2Q6YFQ2 88 aa8.56□□□□□ -1.04
CGREF1-205ENST00000404694 FAM236DA0A1B0GTK5 79 aa8.53□□□□□ -1.04
CGREF1-205ENST00000404694 FAM236CP0DP71 79 aa8.53□□□□□ -1.04
CGREF1-205ENST00000404694 CYP4F30PQ9H0H9 118 aa8.53□□□□□ -1.04
CGREF1-205ENST00000404694 FLGP20930 4061 aaPredicted RBP8.53□□□□□ -1.04
CGREF1-205ENST00000404694 IGKV2-30P06310 120 aa8.52□□□□□ -1.05
CGREF1-205ENST00000404694 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
CGREF1-205ENST00000404694 C7orf65Q6ZTY9 151 aa8.49□□□□□ -1.05
CGREF1-205ENST00000404694 IGKV2D-30A0A075B6S6 120 aa8.45□□□□□ -1.06
CGREF1-205ENST00000404694 M0R2T5 61 aa8.45□□□□□ -1.06
CGREF1-205ENST00000404694 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
CGREF1-205ENST00000404694 SPINK7P58062 85 aa8.44□□□□□ -1.06
CGREF1-205ENST00000404694 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
CGREF1-205ENST00000404694 LCE2DQ5TA82 110 aaPredicted RBP8.43□□□□□ -1.06
CGREF1-205ENST00000404694 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.06
CGREF1-205ENST00000404694 SERP1Q9Y6X1 66 aa8.38□□□□□ -1.07
CGREF1-205ENST00000404694 HRES1P13985 223 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms