RNA–Protein interactions for RNA: ENST00000404377.3

TNFSF18-201, Transcript of TNF superfamily member 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF18, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF18-201ENST00000404377 LRBAP50851 2863 aa2.45□□□□□ -2.02
TNFSF18-201ENST00000404377 NBASA2RRP1 2371 aa2.44□□□□□ -2.02
TNFSF18-201ENST00000404377 DEFB133Q30KQ1 61 aa2.44□□□□□ -2.02
TNFSF18-201ENST00000404377 LAMA2P24043 3122 aaKnown RBP2.44□□□□□ -2.02
TNFSF18-201ENST00000404377 KALRNO60229 2985 aa2.44□□□□□ -2.02
TNFSF18-201ENST00000404377 DCHS1Q96JQ0 3298 aa2.44□□□□□ -2.02
TNFSF18-201ENST00000404377 SETD2Q9BYW2 2564 aaPredicted RBP2.44□□□□□ -2.02
TNFSF18-201ENST00000404377 Q5VSD8 79 aa2.44□□□□□ -2.02
TNFSF18-201ENST00000404377 DMXL1Q9Y485 3027 aa2.43□□□□□ -2.02
TNFSF18-201ENST00000404377 DMDP11532 3685 aa2.43□□□□□ -2.02
TNFSF18-201ENST00000404377 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
TNFSF18-201ENST00000404377 DEFB103AP81534 67 aa2.43□□□□□ -2.02
TNFSF18-201ENST00000404377 CHD9Q3L8U1 2897 aa2.43□□□□□ -2.02
TNFSF18-201ENST00000404377 COL6A5A8TX70 2615 aa2.43□□□□□ -2.02
TNFSF18-201ENST00000404377 DMBT1Q9UGM3 2413 aaPredicted RBP2.42□□□□□ -2.02
TNFSF18-201ENST00000404377 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
TNFSF18-201ENST00000404377 SPG11Q96JI7 2443 aa2.42□□□□□ -2.02
TNFSF18-201ENST00000404377 FRYQ5TBA9 3013 aa2.41□□□□□ -2.02
TNFSF18-201ENST00000404377 NBPF19A0A087WUL8 3843 aa2.41□□□□□ -2.02
TNFSF18-201ENST00000404377 EP300Q09472 2414 aaPredicted RBP2.41□□□□□ -2.02
TNFSF18-201ENST00000404377 LAMA3Q16787 3333 aa2.4□□□□□ -2.02
TNFSF18-201ENST00000404377 UNC80Q8N2C7 3258 aa2.4□□□□□ -2.02
TNFSF18-201ENST00000404377 NF1P21359 2839 aa2.4□□□□□ -2.03
TNFSF18-201ENST00000404377 A0A096LNI7 61 aa2.39□□□□□ -2.03
TNFSF18-201ENST00000404377 ZNF292O60281 2723 aa2.39□□□□□ -2.03
TNFSF18-201ENST00000404377 NCOR2Q9Y618 2525 aa2.38□□□□□ -2.03
TNFSF18-201ENST00000404377 A0A096LPF7 62 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 KRTAP1-4P0C5Y4 121 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 HECTD1Q9ULT8 2610 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 ASPMQ8IZT6 3477 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 DNAH12Q6ZR08 3092 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 MEGF8Q7Z7M0 2845 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 KRTAP10-12P60413 245 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 U3KQA8 63 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 FREM2Q5SZK8 3169 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 MUC3AQ02505 3323 aa2.37□□□□□ -2.03
TNFSF18-201ENST00000404377 LAMA1P25391 3075 aa2.35□□□□□ -2.03
TNFSF18-201ENST00000404377 LOC400499M0QZD8 3231 aa2.35□□□□□ -2.03
TNFSF18-201ENST00000404377 LAMA5O15230 3695 aa2.35□□□□□ -2.03
TNFSF18-201ENST00000404377 DCHS2Q6V1P9 2916 aa2.35□□□□□ -2.03
TNFSF18-201ENST00000404377 SPINK6Q6UWN8 80 aa2.35□□□□□ -2.03
TNFSF18-201ENST00000404377 DMXL2Q8TDJ6 3036 aa2.35□□□□□ -2.03
TNFSF18-201ENST00000404377 AKAP9Q99996 3911 aa2.34□□□□□ -2.03
TNFSF18-201ENST00000404377 EP400Q96L91 3159 aa2.34□□□□□ -2.04
TNFSF18-201ENST00000404377 SONP18583 2426 aaKnown RBP2.34□□□□□ -2.04
TNFSF18-201ENST00000404377 HIVEP3Q5T1R4 2406 aa2.33□□□□□ -2.04
TNFSF18-201ENST00000404377 BDP1A6H8Y1 2624 aa2.33□□□□□ -2.04
TNFSF18-201ENST00000404377 KRTAP10-1P60331 282 aa2.33□□□□□ -2.04
TNFSF18-201ENST00000404377 VPS13DQ5THJ4 4388 aa2.32□□□□□ -2.04
TNFSF18-201ENST00000404377 ANKHD1Q8IWZ3 2542 aaKnown RBP2.31□□□□□ -2.04
TNFSF18-201ENST00000404377 SPENQ96T58 3664 aaKnown RBP2.31□□□□□ -2.04
TNFSF18-201ENST00000404377 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
TNFSF18-201ENST00000404377 PTPN13Q12923 2485 aa2.3□□□□□ -2.04
TNFSF18-201ENST00000404377 WDFY3Q8IZQ1 3526 aa2.3□□□□□ -2.04
TNFSF18-201ENST00000404377 USP9YO00507 2555 aaPredicted RBP2.29□□□□□ -2.04
TNFSF18-201ENST00000404377 M0QZ58 72 aa2.29□□□□□ -2.04
TNFSF18-201ENST00000404377 NOTCH1P46531 2555 aa2.29□□□□□ -2.04
TNFSF18-201ENST00000404377 BRCA2P51587 3418 aa2.28□□□□□ -2.04
TNFSF18-201ENST00000404377 KRTAP10-3P60369 221 aa2.28□□□□□ -2.04
TNFSF18-201ENST00000404377 DNAH11Q96DT5 4516 aa2.28□□□□□ -2.05
TNFSF18-201ENST00000404377 EPG5Q9HCE0 2579 aa2.28□□□□□ -2.05
TNFSF18-201ENST00000404377 LRRK2Q5S007 2527 aa2.27□□□□□ -2.05
TNFSF18-201ENST00000404377 DNAH14Q0VDD8 3507 aa2.27□□□□□ -2.05
TNFSF18-201ENST00000404377 APCP25054 2843 aa2.27□□□□□ -2.05
TNFSF18-201ENST00000404377 VCANP13611 3396 aa2.26□□□□□ -2.05
TNFSF18-201ENST00000404377 HELZ2Q9BYK8 2649 aaKnown RBP2.26□□□□□ -2.05
TNFSF18-201ENST00000404377 CSMD1Q96PZ7 3565 aa2.25□□□□□ -2.05
TNFSF18-201ENST00000404377 PIEZO1Q92508 2521 aa2.25□□□□□ -2.05
TNFSF18-201ENST00000404377 SMG1Q96Q15 3661 aaKnown RBP2.25□□□□□ -2.05
TNFSF18-201ENST00000404377 UTP20O75691 2785 aaKnown RBP2.24□□□□□ -2.05
TNFSF18-201ENST00000404377 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
TNFSF18-201ENST00000404377 NOTCH2Q04721 2471 aa2.24□□□□□ -2.05
TNFSF18-201ENST00000404377 PDZD2O15018 2839 aa2.24□□□□□ -2.05
TNFSF18-201ENST00000404377 ATRQ13535 2644 aa2.24□□□□□ -2.05
TNFSF18-201ENST00000404377 DEFB124Q8NES8 71 aa2.24□□□□□ -2.05
TNFSF18-201ENST00000404377 TLN1Q9Y490 2541 aaKnown RBP2.24□□□□□ -2.05
TNFSF18-201ENST00000404377 ITPR3Q14573 2671 aa2.23□□□□□ -2.05
TNFSF18-201ENST00000404377 LINC01556Q5JQF7 62 aa2.23□□□□□ -2.05
TNFSF18-201ENST00000404377 TACC2O95359 2948 aa2.22□□□□□ -2.05
TNFSF18-201ENST00000404377 TEX15Q9BXT5 2789 aa2.22□□□□□ -2.05
TNFSF18-201ENST00000404377 POLQO75417 2590 aa2.21□□□□□ -2.06
TNFSF18-201ENST00000404377 NIPBLQ6KC79 2804 aaeCLIP2.21□□□□□ -2.06
TNFSF18-201ENST00000404377 USP9XQ93008 2570 aaPredicted RBP2.21□□□□□ -2.06
TNFSF18-201ENST00000404377 COL7A1Q02388 2944 aa2.21□□□□□ -2.06
TNFSF18-201ENST00000404377 H3BNG1 76 aa2.2□□□□□ -2.06
TNFSF18-201ENST00000404377 CFAP46Q8IYW2 2715 aa2.2□□□□□ -2.06
TNFSF18-201ENST00000404377 CSMD3Q7Z407 3707 aa2.2□□□□□ -2.06
TNFSF18-201ENST00000404377 SPTAN1Q13813 2472 aaKnown RBP2.2□□□□□ -2.06
TNFSF18-201ENST00000404377 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
TNFSF18-201ENST00000404377 BSNQ9UPA5 3926 aa2.19□□□□□ -2.06
TNFSF18-201ENST00000404377 FLNCQ14315 2725 aa2.18□□□□□ -2.06
TNFSF18-201ENST00000404377 DNAH8Q96JB1 4490 aa2.18□□□□□ -2.06
TNFSF18-201ENST00000404377 CHD8Q9HCK8 2581 aa2.16□□□□□ -2.06
TNFSF18-201ENST00000404377 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
TNFSF18-201ENST00000404377 MYCBP2O75592 4640 aa2.15□□□□□ -2.06
TNFSF18-201ENST00000404377 ADGRG4Q8IZF6 3080 aa2.15□□□□□ -2.06
TNFSF18-201ENST00000404377 MYO15AQ9UKN7 3530 aa2.15□□□□□ -2.06
TNFSF18-201ENST00000404377 SETXQ7Z333 2677 aaKnown RBP2.15□□□□□ -2.07
TNFSF18-201ENST00000404377 FRAS1Q86XX4 4008 aa2.14□□□□□ -2.07
TNFSF18-201ENST00000404377 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms