RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 IGLV5-52A0A0A0MRZ9 124 aa6.28□□□□□ -1.4
PPP4R1-203ENST00000400556 A6NED7 52 aa6.28□□□□□ -1.4
PPP4R1-203ENST00000400556 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
PPP4R1-203ENST00000400556 DYNC2H1Q8NCM8 4307 aaKnown RBP6.28□□□□□ -1.4
PPP4R1-203ENST00000400556 NUPR2A6NF83 97 aa6.28□□□□□ -1.4
PPP4R1-203ENST00000400556 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
PPP4R1-203ENST00000400556 DNAH6Q9C0G6 4158 aa6.27□□□□□ -1.4
PPP4R1-203ENST00000400556 MRPL34Q9BQ48 92 aaKnown RBP6.27□□□□□ -1.41
PPP4R1-203ENST00000400556 Q5W150 140 aa6.26□□□□□ -1.41
PPP4R1-203ENST00000400556 ZNF861PO60384 105 aa6.26□□□□□ -1.41
PPP4R1-203ENST00000400556 LIMD2Q9BT23 127 aa6.25□□□□□ -1.41
PPP4R1-203ENST00000400556 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
PPP4R1-203ENST00000400556 HRES1P13985 223 aa6.24□□□□□ -1.41
PPP4R1-203ENST00000400556 LCA10Q71F78 164 aa6.24□□□□□ -1.41
PPP4R1-203ENST00000400556 PRR26Q8N8Z3 221 aa6.24□□□□□ -1.41
PPP4R1-203ENST00000400556 ASB16-AS1Q495Z4 193 aa6.24□□□□□ -1.41
PPP4R1-203ENST00000400556 TP53AIP1Q9HCN2 124 aa6.24□□□□□ -1.41
PPP4R1-203ENST00000400556 ZNF706Q9Y5V0 76 aaPredicted RBP6.23□□□□□ -1.41
PPP4R1-203ENST00000400556 Q6ZR54 194 aa6.22□□□□□ -1.41
PPP4R1-203ENST00000400556 DNAH11Q96DT5 4516 aa6.21□□□□□ -1.42
PPP4R1-203ENST00000400556 LY6G6CO95867 125 aa6.2□□□□□ -1.42
PPP4R1-203ENST00000400556 PLAC8Q9NZF1 115 aa6.19□□□□□ -1.42
PPP4R1-203ENST00000400556 SPINK7P58062 85 aa6.19□□□□□ -1.42
PPP4R1-203ENST00000400556 IGLV7-43P04211 117 aa6.18□□□□□ -1.42
PPP4R1-203ENST00000400556 SEC61GP60059 68 aa6.18□□□□□ -1.42
PPP4R1-203ENST00000400556 LOC101927531A0A1B0GV80 90 aa6.18□□□□□ -1.42
PPP4R1-203ENST00000400556 DNHD1Q96M86 4753 aa6.17□□□□□ -1.42
PPP4R1-203ENST00000400556 Q75L30 129 aa6.17□□□□□ -1.42
PPP4R1-203ENST00000400556 C1orf134Q5TEV5 83 aa6.17□□□□□ -1.42
PPP4R1-203ENST00000400556 ALMS1Q8TCU4 4167 aa6.16□□□□□ -1.42
PPP4R1-203ENST00000400556 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
PPP4R1-203ENST00000400556 LRP1BQ9NZR2 4599 aa6.13□□□□□ -1.43
PPP4R1-203ENST00000400556 LINC01558Q9Y6Z2 57 aa6.13□□□□□ -1.43
PPP4R1-203ENST00000400556 DNAH5Q8TE73 4624 aa6.11□□□□□ -1.43
PPP4R1-203ENST00000400556 LINC00313P59037 77 aa6.1□□□□□ -1.43
PPP4R1-203ENST00000400556 KRTAP13-3Q3SY46 172 aa6.1□□□□□ -1.43
PPP4R1-203ENST00000400556 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
PPP4R1-203ENST00000400556 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
PPP4R1-203ENST00000400556 IGKV2D-30A0A075B6S6 120 aa6.08□□□□□ -1.44
PPP4R1-203ENST00000400556 IGKV2-30P06310 120 aa6.08□□□□□ -1.44
PPP4R1-203ENST00000400556 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
PPP4R1-203ENST00000400556 HYDINQ4G0P3 5121 aa6.08□□□□□ -1.44
PPP4R1-203ENST00000400556 ACYP2P14621 99 aa6.05□□□□□ -1.44
PPP4R1-203ENST00000400556 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
PPP4R1-203ENST00000400556 A6NN06 94 aa6.05□□□□□ -1.44
PPP4R1-203ENST00000400556 KRTAP10-1P60331 282 aa6.05□□□□□ -1.44
PPP4R1-203ENST00000400556 SSBP3-AS1Q7Z2R9 100 aa6.04□□□□□ -1.44
PPP4R1-203ENST00000400556 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
PPP4R1-203ENST00000400556 FAT2Q9NYQ8 4349 aa6.03□□□□□ -1.44
PPP4R1-203ENST00000400556 SPINK1P00995 79 aa6.01□□□□□ -1.45
PPP4R1-203ENST00000400556 C8orf87E5RJ46 101 aa6.01□□□□□ -1.45
PPP4R1-203ENST00000400556 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
PPP4R1-203ENST00000400556 RBM12B-AS1Q9P1G2 102 aa6□□□□□ -1.45
PPP4R1-203ENST00000400556 DMAC1Q96GE9 116 aa6□□□□□ -1.45
PPP4R1-203ENST00000400556 A0A1B0GU69 56 aa5.99□□□□□ -1.45
PPP4R1-203ENST00000400556 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
PPP4R1-203ENST00000400556 PKHD1P08F94 4074 aa5.98□□□□□ -1.45
PPP4R1-203ENST00000400556 PLA2G1BP04054 148 aaKnown RBP5.97□□□□□ -1.45
PPP4R1-203ENST00000400556 ADM2Q7Z4H4 148 aa5.97□□□□□ -1.45
PPP4R1-203ENST00000400556 Q8N1X5 172 aa5.97□□□□□ -1.45
PPP4R1-203ENST00000400556 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.45
PPP4R1-203ENST00000400556 C7orf65Q6ZTY9 151 aa5.96□□□□□ -1.45
PPP4R1-203ENST00000400556 KRTAP1-4P0C5Y4 121 aa5.96□□□□□ -1.46
PPP4R1-203ENST00000400556 PKD1P98161 4303 aa5.96□□□□□ -1.46
PPP4R1-203ENST00000400556 C4orf48Q5BLP8 95 aa5.94□□□□□ -1.46
PPP4R1-203ENST00000400556 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
PPP4R1-203ENST00000400556 SMR3BP02814 79 aaPredicted RBP5.93□□□□□ -1.46
PPP4R1-203ENST00000400556 C9orf92A6NGG3 77 aa5.9□□□□□ -1.47
PPP4R1-203ENST00000400556 Q6ZSA8 131 aa5.9□□□□□ -1.47
PPP4R1-203ENST00000400556 FAT1Q14517 4588 aa5.88□□□□□ -1.47
PPP4R1-203ENST00000400556 MIR22HGQ0VDD5 57 aa5.87□□□□□ -1.47
PPP4R1-203ENST00000400556 UQCR11O14957 56 aa5.84□□□□□ -1.47
PPP4R1-203ENST00000400556 FLG2Q5D862 2391 aaPredicted RBP5.83□□□□□ -1.48
PPP4R1-203ENST00000400556 LINC00304Q8N9R0 145 aa5.82□□□□□ -1.48
PPP4R1-203ENST00000400556 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
PPP4R1-203ENST00000400556 DMBT1Q9UGM3 2413 aaPredicted RBP5.77□□□□□ -1.49
PPP4R1-203ENST00000400556 DYNC1H1Q14204 4646 aaKnown RBP5.77□□□□□ -1.49
PPP4R1-203ENST00000400556 SACSQ9NZJ4 4579 aa5.74□□□□□ -1.49
PPP4R1-203ENST00000400556 CSAG1Q6PB30 78 aa5.72□□□□□ -1.49
PPP4R1-203ENST00000400556 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
PPP4R1-203ENST00000400556 H0YAA0 97 aa5.69□□□□□ -1.5
PPP4R1-203ENST00000400556 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
PPP4R1-203ENST00000400556 LRP1Q07954 4544 aaKnown RBP5.68□□□□□ -1.5
PPP4R1-203ENST00000400556 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
PPP4R1-203ENST00000400556 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
PPP4R1-203ENST00000400556 APOBP04114 4563 aaKnown RBP5.64□□□□□ -1.51
PPP4R1-203ENST00000400556 A0A1B0GU33 70 aa5.63□□□□□ -1.51
PPP4R1-203ENST00000400556 A8MUU9 505 aa5.63□□□□□ -1.51
PPP4R1-203ENST00000400556 C20orf166-AS1Q96NR2 134 aa5.62□□□□□ -1.51
PPP4R1-203ENST00000400556 KMT2CQ8NEZ4 4911 aaKnown RBP5.6□□□□□ -1.51
PPP4R1-203ENST00000400556 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
PPP4R1-203ENST00000400556 HSPG2P98160 4391 aa5.58□□□□□ -1.52
PPP4R1-203ENST00000400556 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
PPP4R1-203ENST00000400556 RPS29P62273 56 aaKnown RBP5.58□□□□□ -1.52
PPP4R1-203ENST00000400556 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
PPP4R1-203ENST00000400556 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
PPP4R1-203ENST00000400556 A0A0D9SG42 100 aa5.53□□□□□ -1.52
PPP4R1-203ENST00000400556 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
PPP4R1-203ENST00000400556 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
PPP4R1-203ENST00000400556 RYR2Q92736 4967 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms