RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 LYRM7Q5U5X0 104 aa8.08□□□□□ -1.12
UFD1-202ENST00000399523 SPRR2GQ9BYE4 73 aa8.08□□□□□ -1.12
UFD1-202ENST00000399523 KRTAP2-2Q9BYT5 123 aa8.06□□□□□ -1.12
UFD1-202ENST00000399523 KRTAP2-1Q9BYU5 128 aa8.06□□□□□ -1.12
UFD1-202ENST00000399523 IGKV3D-7A0A0C4DH55 119 aa8.05□□□□□ -1.12
UFD1-202ENST00000399523 HSBP1L1C9JCN9 74 aa8.05□□□□□ -1.12
UFD1-202ENST00000399523 DSCR8Q96T75 97 aa8.05□□□□□ -1.12
UFD1-202ENST00000399523 J3KT08 172 aa8.04□□□□□ -1.12
UFD1-202ENST00000399523 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
UFD1-202ENST00000399523 H3BQ85 93 aa8.02□□□□□ -1.13
UFD1-202ENST00000399523 SPRR2EP22531 72 aa8.02□□□□□ -1.13
UFD1-202ENST00000399523 SPRR2BP35325 72 aa8.02□□□□□ -1.13
UFD1-202ENST00000399523 SPRR2AP35326 72 aa8.02□□□□□ -1.13
UFD1-202ENST00000399523 ORMDL1Q9P0S3 153 aa8.01□□□□□ -1.13
UFD1-202ENST00000399523 FAM236AA0A1B0GUQ0 79 aa8□□□□□ -1.13
UFD1-202ENST00000399523 FAM236BA0A1B0GV22 79 aa8□□□□□ -1.13
UFD1-202ENST00000399523 C8orf17Q9NRJ1 99 aa7.99□□□□□ -1.13
UFD1-202ENST00000399523 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
UFD1-202ENST00000399523 NDUFB1O75438 58 aa7.98□□□□□ -1.13
UFD1-202ENST00000399523 SPRR2FQ96RM1 72 aa7.98□□□□□ -1.13
UFD1-202ENST00000399523 VPS25Q9BRG1 176 aa7.96□□□□□ -1.14
UFD1-202ENST00000399523 DNAL4O96015 105 aa7.95□□□□□ -1.14
UFD1-202ENST00000399523 TRIAP1O43715 76 aa7.93□□□□□ -1.14
UFD1-202ENST00000399523 COX8AP10176 69 aa7.93□□□□□ -1.14
UFD1-202ENST00000399523 Q6ZVQ6 151 aa7.93□□□□□ -1.14
UFD1-202ENST00000399523 UBE2V1Q13404 147 aa7.92□□□□□ -1.14
UFD1-202ENST00000399523 PRO1854Q9UHT4 67 aa7.92□□□□□ -1.14
UFD1-202ENST00000399523 DLEU1O43261 78 aa7.91□□□□□ -1.14
UFD1-202ENST00000399523 C5orf47Q569G3 176 aa7.9□□□□□ -1.14
UFD1-202ENST00000399523 C21orf62-AS1Q17RA5 79 aa7.89□□□□□ -1.15
UFD1-202ENST00000399523 Q6ZQT0 140 aa7.89□□□□□ -1.15
UFD1-202ENST00000399523 C2orf91Q6ZV80 131 aa7.88□□□□□ -1.15
UFD1-202ENST00000399523 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
UFD1-202ENST00000399523 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
UFD1-202ENST00000399523 RBM3P98179 157 aaKnown RBP7.86□□□□□ -1.15
UFD1-202ENST00000399523 LCE1AQ5T7P2 110 aa7.86□□□□□ -1.15
UFD1-202ENST00000399523 HIST1H2BLQ99880 126 aa7.86□□□□□ -1.15
UFD1-202ENST00000399523 IMUPQ9GZP8 106 aa7.86□□□□□ -1.15
UFD1-202ENST00000399523 HIGD1BQ9P298 99 aa7.86□□□□□ -1.15
UFD1-202ENST00000399523 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
UFD1-202ENST00000399523 IGKV2-30P06310 120 aa7.83□□□□□ -1.16
UFD1-202ENST00000399523 HIST3H2BBQ8N257 126 aa7.83□□□□□ -1.16
UFD1-202ENST00000399523 SMCPP49901 116 aaPredicted RBP7.82□□□□□ -1.16
UFD1-202ENST00000399523 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
UFD1-202ENST00000399523 CEND1Q8N111 149 aa7.81□□□□□ -1.16
UFD1-202ENST00000399523 MRPL34Q9BQ48 92 aaKnown RBP7.81□□□□□ -1.16
UFD1-202ENST00000399523 TMEM254Q8TBM7 123 aa7.8□□□□□ -1.16
UFD1-202ENST00000399523 TMEM238LA0A1B0GVL6 79 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 A6NJY4 79 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 KLKP1Q107X0 134 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 C4orf26Q17RF5 130 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 PRR15Q8IV56 129 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
UFD1-202ENST00000399523 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
UFD1-202ENST00000399523 C14orf144Q96I85 54 aa7.78□□□□□ -1.16
UFD1-202ENST00000399523 C9JAW5 83 aa7.77□□□□□ -1.17
UFD1-202ENST00000399523 SPRR2DP22532 72 aa7.77□□□□□ -1.17
UFD1-202ENST00000399523 S100A2P29034 98 aa7.77□□□□□ -1.17
UFD1-202ENST00000399523 GPR98Q8WXG9 6306 aa7.76□□□□□ -1.17
UFD1-202ENST00000399523 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
UFD1-202ENST00000399523 PSMB2P49721 201 aa7.75□□□□□ -1.17
UFD1-202ENST00000399523 FXYD2P54710 66 aa7.75□□□□□ -1.17
UFD1-202ENST00000399523 Q5W150 140 aa7.74□□□□□ -1.17
UFD1-202ENST00000399523 COX6CP09669 75 aa7.73□□□□□ -1.17
UFD1-202ENST00000399523 NDUFS5O43920 106 aa7.72□□□□□ -1.17
UFD1-202ENST00000399523 KRTAP8-1Q8IUC2 63 aa7.72□□□□□ -1.17
UFD1-202ENST00000399523 S4R3F8 94 aa7.72□□□□□ -1.17
UFD1-202ENST00000399523 LOC105371267A0A1B0GV96 52 aa7.7□□□□□ -1.18
UFD1-202ENST00000399523 A0A1B0GW54 56 aa7.7□□□□□ -1.18
UFD1-202ENST00000399523 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
UFD1-202ENST00000399523 KRTAP3-1Q9BYR8 98 aa7.7□□□□□ -1.18
UFD1-202ENST00000399523 LCA10Q71F78 164 aa7.68□□□□□ -1.18
UFD1-202ENST00000399523 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
UFD1-202ENST00000399523 K7ERJ3 54 aa7.63□□□□□ -1.19
UFD1-202ENST00000399523 S100A6P06703 90 aa7.63□□□□□ -1.19
UFD1-202ENST00000399523 SPATA45Q537H7 98 aa7.63□□□□□ -1.19
UFD1-202ENST00000399523 PAM16Q9Y3D7 125 aa7.63□□□□□ -1.19
UFD1-202ENST00000399523 BAALC-AS2P0C853 105 aa7.62□□□□□ -1.19
UFD1-202ENST00000399523 LCE3BQ5TA77 95 aa7.62□□□□□ -1.19
UFD1-202ENST00000399523 LOC110117498A0A087WWA1 95 aa7.6□□□□□ -1.19
UFD1-202ENST00000399523 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
UFD1-202ENST00000399523 K7EQZ3 153 aa7.58□□□□□ -1.2
UFD1-202ENST00000399523 MT1XP80297 61 aa7.57□□□□□ -1.2
UFD1-202ENST00000399523 NREPQ16612 68 aa7.57□□□□□ -1.2
UFD1-202ENST00000399523 JMJD7-PLA2G4BH0Y9G9 81 aa7.55□□□□□ -1.2
UFD1-202ENST00000399523 C1orf64Q8NEQ6 169 aa7.55□□□□□ -1.2
UFD1-202ENST00000399523 SMIM6P0DI80 62 aa7.54□□□□□ -1.2
UFD1-202ENST00000399523 PDE6GP18545 87 aa7.54□□□□□ -1.2
UFD1-202ENST00000399523 SCGB1C2P0DMR2 95 aa7.53□□□□□ -1.2
UFD1-202ENST00000399523 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
UFD1-202ENST00000399523 VAMP8Q9BV40 100 aa7.52□□□□□ -1.21
UFD1-202ENST00000399523 HSD52Q0P140 79 aa7.5□□□□□ -1.21
UFD1-202ENST00000399523 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
UFD1-202ENST00000399523 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
UFD1-202ENST00000399523 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
UFD1-202ENST00000399523 CXCL6P80162 114 aa7.46□□□□□ -1.22
UFD1-202ENST00000399523 C14orf132Q9NPU4 83 aa7.46□□□□□ -1.22
UFD1-202ENST00000399523 CASC2Q6XLA1 102 aa7.43□□□□□ -1.22
UFD1-202ENST00000399523 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
UFD1-202ENST00000399523 BPY2O14599 106 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms