RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 BPY2O14599 106 aa5.66□□□□□ -1.5
LINC00243-201ENST00000399196 RYR1P21817 5038 aa5.66□□□□□ -1.5
LINC00243-201ENST00000399196 IGKV4-1P06312 121 aa5.65□□□□□ -1.5
LINC00243-201ENST00000399196 A0A087WSZ3 146 aa5.65□□□□□ -1.51
LINC00243-201ENST00000399196 TMEM254Q8TBM7 123 aa5.65□□□□□ -1.51
LINC00243-201ENST00000399196 KIAA1109Q2LD37 5005 aa5.65□□□□□ -1.51
LINC00243-201ENST00000399196 DSCR10P59022 87 aa5.63□□□□□ -1.51
LINC00243-201ENST00000399196 DEFB116Q30KQ4 102 aa5.63□□□□□ -1.51
LINC00243-201ENST00000399196 RPL37AP61513 92 aaKnown RBP5.63□□□□□ -1.51
LINC00243-201ENST00000399196 MOBPQ13875 183 aa5.63□□□□□ -1.51
LINC00243-201ENST00000399196 SMR3BP02814 79 aaPredicted RBP5.62□□□□□ -1.51
LINC00243-201ENST00000399196 BIRC6Q9NR09 4857 aa5.61□□□□□ -1.51
LINC00243-201ENST00000399196 FAM229BQ4G0N7 80 aa5.6□□□□□ -1.51
LINC00243-201ENST00000399196 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
LINC00243-201ENST00000399196 K7EQZ3 153 aa5.6□□□□□ -1.51
LINC00243-201ENST00000399196 PRR15Q8IV56 129 aa5.58□□□□□ -1.52
LINC00243-201ENST00000399196 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
LINC00243-201ENST00000399196 LINC00472Q9H8W2 130 aa5.58□□□□□ -1.52
LINC00243-201ENST00000399196 OCR1Q9BZK8 76 aa5.57□□□□□ -1.52
LINC00243-201ENST00000399196 SPINK6Q6UWN8 80 aa5.56□□□□□ -1.52
LINC00243-201ENST00000399196 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
LINC00243-201ENST00000399196 SSBP3-AS1Q7Z2R9 100 aa5.55□□□□□ -1.52
LINC00243-201ENST00000399196 Q96NJ1 140 aa5.55□□□□□ -1.52
LINC00243-201ENST00000399196 A0A087X002 238 aa5.54□□□□□ -1.52
LINC00243-201ENST00000399196 PSPHP1O15172 72 aa5.54□□□□□ -1.52
LINC00243-201ENST00000399196 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
LINC00243-201ENST00000399196 IGHV6-1A0A0B4J1U7 121 aa5.54□□□□□ -1.52
LINC00243-201ENST00000399196 KRTAP1-4P0C5Y4 121 aa5.54□□□□□ -1.52
LINC00243-201ENST00000399196 MP68P56378 58 aa5.54□□□□□ -1.52
LINC00243-201ENST00000399196 hDV103S1A0JD37 113 aa5.53□□□□□ -1.52
LINC00243-201ENST00000399196 Q1T7F1 81 aa5.53□□□□□ -1.52
LINC00243-201ENST00000399196 A8MUN3 132 aa5.52□□□□□ -1.53
LINC00243-201ENST00000399196 LINC00313P59037 77 aa5.52□□□□□ -1.53
LINC00243-201ENST00000399196 KRTAP13-2Q52LG2 175 aa5.52□□□□□ -1.53
LINC00243-201ENST00000399196 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
LINC00243-201ENST00000399196 HERC2O95714 4834 aa5.52□□□□□ -1.53
LINC00243-201ENST00000399196 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
LINC00243-201ENST00000399196 TYMSOSQ8TAI1 123 aa5.5□□□□□ -1.53
LINC00243-201ENST00000399196 A8MWP4 228 aa5.49□□□□□ -1.53
LINC00243-201ENST00000399196 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
LINC00243-201ENST00000399196 KTN1-AS1Q86SY8 53 aa5.49□□□□□ -1.53
LINC00243-201ENST00000399196 KRTAP29-1A8MX34 341 aaPredicted RBP5.49□□□□□ -1.53
LINC00243-201ENST00000399196 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
LINC00243-201ENST00000399196 C1orf64Q8NEQ6 169 aa5.47□□□□□ -1.53
LINC00243-201ENST00000399196 NDUFB1O75438 58 aa5.46□□□□□ -1.53
LINC00243-201ENST00000399196 Q5VSD8 79 aa5.46□□□□□ -1.53
LINC00243-201ENST00000399196 MMP24-AS1A0A0U1RRL7 71 aa5.45□□□□□ -1.54
LINC00243-201ENST00000399196 ZCCHC13Q8WW36 166 aaKnown RBP5.45□□□□□ -1.54
LINC00243-201ENST00000399196 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
LINC00243-201ENST00000399196 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
LINC00243-201ENST00000399196 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
LINC00243-201ENST00000399196 LRP1Q07954 4544 aaKnown RBP5.44□□□□□ -1.54
LINC00243-201ENST00000399196 TRAV22A0A0B4J277 110 aa5.44□□□□□ -1.54
LINC00243-201ENST00000399196 LIMD2Q9BT23 127 aa5.44□□□□□ -1.54
LINC00243-201ENST00000399196 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
LINC00243-201ENST00000399196 Q8N1X5 172 aa5.43□□□□□ -1.54
LINC00243-201ENST00000399196 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
LINC00243-201ENST00000399196 CASC2Q6XLA1 102 aa5.43□□□□□ -1.54
LINC00243-201ENST00000399196 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
LINC00243-201ENST00000399196 SPINK1P00995 79 aa5.42□□□□□ -1.54
LINC00243-201ENST00000399196 ASB16-AS1Q495Z4 193 aa5.41□□□□□ -1.54
LINC00243-201ENST00000399196 A0A1B0GVX0 72 aa5.41□□□□□ -1.54
LINC00243-201ENST00000399196 SPAG11AQ6PDA7 123 aa5.4□□□□□ -1.54
LINC00243-201ENST00000399196 C8orf17Q9NRJ1 99 aa5.4□□□□□ -1.54
LINC00243-201ENST00000399196 MYCBP2O75592 4640 aa5.4□□□□□ -1.54
LINC00243-201ENST00000399196 LCA10Q71F78 164 aa5.39□□□□□ -1.55
LINC00243-201ENST00000399196 TNXBP22105 4242 aa5.38□□□□□ -1.55
LINC00243-201ENST00000399196 RPS29P62273 56 aaKnown RBP5.36□□□□□ -1.55
LINC00243-201ENST00000399196 Q5VV11 94 aa5.36□□□□□ -1.55
LINC00243-201ENST00000399196 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
LINC00243-201ENST00000399196 PRR4Q16378 134 aa5.33□□□□□ -1.56
LINC00243-201ENST00000399196 LCE2CQ5TA81 110 aa5.33□□□□□ -1.56
LINC00243-201ENST00000399196 SPANXA2-OT1Q8N9U9 137 aa5.33□□□□□ -1.56
LINC00243-201ENST00000399196 MRPL34Q9BQ48 92 aaKnown RBP5.33□□□□□ -1.56
LINC00243-201ENST00000399196 CHKB-CPT1BH3BT56 60 aa5.32□□□□□ -1.56
LINC00243-201ENST00000399196 FLG2Q5D862 2391 aaPredicted RBP5.32□□□□□ -1.56
LINC00243-201ENST00000399196 H0Y9P7 68 aa5.32□□□□□ -1.56
LINC00243-201ENST00000399196 LINC00208Q96KT6 92 aa5.32□□□□□ -1.56
LINC00243-201ENST00000399196 ATP11AUNQ6ZP68 121 aa5.31□□□□□ -1.56
LINC00243-201ENST00000399196 Q8N9P0 234 aaPredicted RBP5.31□□□□□ -1.56
LINC00243-201ENST00000399196 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
LINC00243-201ENST00000399196 H3BPC8 53 aa5.3□□□□□ -1.56
LINC00243-201ENST00000399196 A8MU10 97 aa5.3□□□□□ -1.56
LINC00243-201ENST00000399196 KRTAP10-8P60410 259 aa5.29□□□□□ -1.56
LINC00243-201ENST00000399196 PRR15LQ9BU68 103 aa5.29□□□□□ -1.56
LINC00243-201ENST00000399196 KRTAP16-1A8MUX0 517 aa5.28□□□□□ -1.56
LINC00243-201ENST00000399196 Q5W150 140 aa5.28□□□□□ -1.56
LINC00243-201ENST00000399196 TP53AIP1Q9HCN2 124 aa5.28□□□□□ -1.56
LINC00243-201ENST00000399196 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
LINC00243-201ENST00000399196 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
LINC00243-201ENST00000399196 LOC101927531A0A1B0GV80 90 aa5.27□□□□□ -1.57
LINC00243-201ENST00000399196 SPTSSBQ8NFR3 76 aa5.27□□□□□ -1.57
LINC00243-201ENST00000399196 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
LINC00243-201ENST00000399196 A6NN06 94 aa5.25□□□□□ -1.57
LINC00243-201ENST00000399196 A6NED7 52 aa5.25□□□□□ -1.57
LINC00243-201ENST00000399196 MT1HL1P0DM35 61 aa5.25□□□□□ -1.57
LINC00243-201ENST00000399196 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
LINC00243-201ENST00000399196 DMBT1Q9UGM3 2413 aaPredicted RBP5.22□□□□□ -1.57
LINC00243-201ENST00000399196 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
LINC00243-201ENST00000399196 COA5Q86WW8 74 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms