RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 LOC400499M0QZD8 3231 aa3.01□□□□□ -1.93
TTC3-204ENST00000399017 A8MUU9 505 aa3.01□□□□□ -1.93
TTC3-204ENST00000399017 PANO1I0J062 215 aa3.01□□□□□ -1.93
TTC3-204ENST00000399017 Q75L30 129 aa3□□□□□ -1.93
TTC3-204ENST00000399017 LINC01558Q9Y6Z2 57 aa3□□□□□ -1.93
TTC3-204ENST00000399017 LAMA5O15230 3695 aa3□□□□□ -1.93
TTC3-204ENST00000399017 ITPR1Q14643 2758 aa2.99□□□□□ -1.93
TTC3-204ENST00000399017 NIPBLQ6KC79 2804 aaeCLIP2.99□□□□□ -1.934e-6■■■■□ 23.4
TTC3-204ENST00000399017 HIVEP1P15822 2718 aa2.99□□□□□ -1.93
TTC3-204ENST00000399017 DCHS2Q6V1P9 2916 aa2.99□□□□□ -1.93
TTC3-204ENST00000399017 SPATA8Q6RVD6 105 aa2.99□□□□□ -1.93
TTC3-204ENST00000399017 RELNP78509 3460 aa2.98□□□□□ -1.93
TTC3-204ENST00000399017 MYO15AQ9UKN7 3530 aa2.98□□□□□ -1.93
TTC3-204ENST00000399017 CELSR2Q9HCU4 2923 aa2.98□□□□□ -1.93
TTC3-204ENST00000399017 KRTAP10-1P60331 282 aa2.98□□□□□ -1.93
TTC3-204ENST00000399017 SPRR1AP35321 89 aa2.97□□□□□ -1.93
TTC3-204ENST00000399017 LINC00310P59036 64 aa2.97□□□□□ -1.93
TTC3-204ENST00000399017 ASB16-AS1Q495Z4 193 aa2.96□□□□□ -1.93
TTC3-204ENST00000399017 DCHS1Q96JQ0 3298 aa2.96□□□□□ -1.94
TTC3-204ENST00000399017 PDZD2O15018 2839 aa2.95□□□□□ -1.94
TTC3-204ENST00000399017 A0A0G2JQZ4 141 aa2.95□□□□□ -1.94
TTC3-204ENST00000399017 SMCPP49901 116 aaPredicted RBP2.95□□□□□ -1.94
TTC3-204ENST00000399017 KRTAP10-8P60410 259 aa2.95□□□□□ -1.94
TTC3-204ENST00000399017 TACC2O95359 2948 aa2.94□□□□□ -1.94
TTC3-204ENST00000399017 KRTAP10-2P60368 255 aa2.94□□□□□ -1.94
TTC3-204ENST00000399017 LINC00472Q9H8W2 130 aa2.94□□□□□ -1.94
TTC3-204ENST00000399017 TENM2Q9NT68 2774 aa2.94□□□□□ -1.94
TTC3-204ENST00000399017 Q8NDZ9 215 aa2.93□□□□□ -1.94
TTC3-204ENST00000399017 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
TTC3-204ENST00000399017 NOTCH2NLQ7Z3S9 236 aa2.92□□□□□ -1.94
TTC3-204ENST00000399017 Q6ZR54 194 aa2.91□□□□□ -1.94
TTC3-204ENST00000399017 Q5XG85 94 aa2.91□□□□□ -1.94
TTC3-204ENST00000399017 PKD1L1Q8TDX9 2849 aa2.9□□□□□ -1.94
TTC3-204ENST00000399017 TENM4Q6N022 2769 aa2.9□□□□□ -1.95
TTC3-204ENST00000399017 KRTAP10-10P60014 251 aa2.89□□□□□ -1.95
TTC3-204ENST00000399017 ZANQ9Y493 2812 aa2.88□□□□□ -1.95
TTC3-204ENST00000399017 SPENQ96T58 3664 aaKnown RBP2.87□□□□□ -1.95
TTC3-204ENST00000399017 A0A087X002 238 aa2.87□□□□□ -1.95
TTC3-204ENST00000399017 COL7A1Q02388 2944 aa2.86□□□□□ -1.95
TTC3-204ENST00000399017 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
TTC3-204ENST00000399017 VWFP04275 2813 aa2.86□□□□□ -1.95
TTC3-204ENST00000399017 TGP01266 2768 aa2.85□□□□□ -1.95
TTC3-204ENST00000399017 A0A1B0GVY2 172 aa2.85□□□□□ -1.95
TTC3-204ENST00000399017 Q6ZRN7 208 aaPredicted RBP2.84□□□□□ -1.96
TTC3-204ENST00000399017 KRTAP26-1Q6PEX3 210 aa2.84□□□□□ -1.96
TTC3-204ENST00000399017 KRTAP1-5Q9BYS1 174 aa2.83□□□□□ -1.96
TTC3-204ENST00000399017 SMG1Q96Q15 3661 aaKnown RBP2.82□□□□□ -1.96
TTC3-204ENST00000399017 MUC3AQ02505 3323 aa2.81□□□□□ -1.96
TTC3-204ENST00000399017 CSMD1Q96PZ7 3565 aa2.8□□□□□ -1.96
TTC3-204ENST00000399017 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
TTC3-204ENST00000399017 KRTAP29-1A8MX34 341 aaPredicted RBP2.78□□□□□ -1.96
TTC3-204ENST00000399017 MEGF8Q7Z7M0 2845 aa2.77□□□□□ -1.97
TTC3-204ENST00000399017 CSMD2Q7Z408 3487 aa2.77□□□□□ -1.97
TTC3-204ENST00000399017 FBN2P35556 2912 aa2.75□□□□□ -1.97
TTC3-204ENST00000399017 Q5VV11 94 aa2.75□□□□□ -1.97
TTC3-204ENST00000399017 DMDP11532 3685 aa2.74□□□□□ -1.97
TTC3-204ENST00000399017 KRTAP4-16G5E9R7 235 aaPredicted RBP2.74□□□□□ -1.97
TTC3-204ENST00000399017 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
TTC3-204ENST00000399017 SRRM2Q9UQ35 2752 aaKnown RBP2.74□□□□□ -1.97
TTC3-204ENST00000399017 MXRA5Q9NR99 2828 aa2.74□□□□□ -1.97
TTC3-204ENST00000399017 VPS13CQ709C8 3753 aa2.73□□□□□ -1.97
TTC3-204ENST00000399017 XP32Q5T750 250 aa2.71□□□□□ -1.98
TTC3-204ENST00000399017 CUBNO60494 3623 aa2.71□□□□□ -1.98
TTC3-204ENST00000399017 A8MU10 97 aa2.68□□□□□ -1.98
TTC3-204ENST00000399017 A6NN06 94 aa2.67□□□□□ -1.98
TTC3-204ENST00000399017 KRTAP13-2Q52LG2 175 aa2.66□□□□□ -1.98
TTC3-204ENST00000399017 KRTAP13-1Q8IUC0 172 aa2.63□□□□□ -1.99
TTC3-204ENST00000399017 TRRAPQ9Y4A5 3859 aa2.62□□□□□ -1.99
TTC3-204ENST00000399017 BSNQ9UPA5 3926 aa2.61□□□□□ -1.99
TTC3-204ENST00000399017 HRNRQ86YZ3 2850 aaPredicted RBP2.61□□□□□ -1.99
TTC3-204ENST00000399017 KRTAP13-3Q3SY46 172 aa2.6□□□□□ -1.99
TTC3-204ENST00000399017 KRTAP11-1Q8IUC1 163 aa2.6□□□□□ -1.99
TTC3-204ENST00000399017 CRCT1Q9UGL9 99 aa2.59□□□□□ -1.99
TTC3-204ENST00000399017 AKAP9Q99996 3911 aa2.59□□□□□ -1.99
TTC3-204ENST00000399017 SVEP1Q4LDE5 3571 aa2.59□□□□□ -2
TTC3-204ENST00000399017 FBN3Q75N90 2809 aa2.58□□□□□ -2
TTC3-204ENST00000399017 OTOGQ6ZRI0 2925 aa2.57□□□□□ -2
TTC3-204ENST00000399017 KRTAP10-6P60371 365 aaPredicted RBP2.57□□□□□ -2
TTC3-204ENST00000399017 FBN1P35555 2871 aaKnown RBP2.56□□□□□ -2
TTC3-204ENST00000399017 KRTAP23-1A1A580 65 aa2.54□□□□□ -2
TTC3-204ENST00000399017 CSMD3Q7Z407 3707 aa2.54□□□□□ -2
TTC3-204ENST00000399017 KRTAP1-4P0C5Y4 121 aa2.53□□□□□ -2
TTC3-204ENST00000399017 H0YAA0 97 aa2.53□□□□□ -2
TTC3-204ENST00000399017 LORP23490 312 aaPredicted RBP2.53□□□□□ -2
TTC3-204ENST00000399017 KRTAP13-4Q3LI77 160 aa2.48□□□□□ -2.01
TTC3-204ENST00000399017 KRTAP15-1Q3LI76 137 aa2.47□□□□□ -2.01
TTC3-204ENST00000399017 KRTAP12-2P59991 146 aa2.47□□□□□ -2.01
TTC3-204ENST00000399017 ZNF469Q96JG9 3925 aaPredicted RBP2.46□□□□□ -2.02
TTC3-204ENST00000399017 CYSTM1Q9H1C7 97 aa2.45□□□□□ -2.02
TTC3-204ENST00000399017 KRTAP7-1Q8IUC3 87 aa2.44□□□□□ -2.02
TTC3-204ENST00000399017 INE1O15225 51 aa2.42□□□□□ -2.02
TTC3-204ENST00000399017 LYSTQ99698 3801 aa2.39□□□□□ -2.03
TTC3-204ENST00000399017 KRTAP10-7P60409 375 aaPredicted RBP2.39□□□□□ -2.03
TTC3-204ENST00000399017 KRTAP10-12P60413 245 aa2.38□□□□□ -2.03
TTC3-204ENST00000399017 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
TTC3-204ENST00000399017 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
TTC3-204ENST00000399017 FRAS1Q86XX4 4008 aa2.31□□□□□ -2.04
TTC3-204ENST00000399017 KRTAP19-4Q3LI73 84 aa2.31□□□□□ -2.04
TTC3-204ENST00000399017 CMYA5Q8N3K9 4069 aa2.3□□□□□ -2.04
TTC3-204ENST00000399017 HUWE1Q7Z6Z7 4374 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms