RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 C4orf48Q5BLP8 95 aa4.28□□□□□ -1.72
RGPD1-201ENST00000398193 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
RGPD1-201ENST00000398193 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
RGPD1-201ENST00000398193 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
RGPD1-201ENST00000398193 TYMSOSQ8TAI1 123 aa4.28□□□□□ -1.72
RGPD1-201ENST00000398193 A0A087X002 238 aa4.28□□□□□ -1.72
RGPD1-201ENST00000398193 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
RGPD1-201ENST00000398193 CYSTM1Q9H1C7 97 aa4.27□□□□□ -1.73
RGPD1-201ENST00000398193 SNURFQ9Y675 71 aa4.26□□□□□ -1.73
RGPD1-201ENST00000398193 IGHV6-1A0A0B4J1U7 121 aa4.26□□□□□ -1.73
RGPD1-201ENST00000398193 H0Y9P7 68 aa4.26□□□□□ -1.73
RGPD1-201ENST00000398193 RYR2Q92736 4967 aa4.26□□□□□ -1.73
RGPD1-201ENST00000398193 TRAV22A0A0B4J277 110 aa4.26□□□□□ -1.73
RGPD1-201ENST00000398193 LINC00304Q8N9R0 145 aa4.25□□□□□ -1.73
RGPD1-201ENST00000398193 C1orf195Q5TG92 126 aa4.25□□□□□ -1.73
RGPD1-201ENST00000398193 APOBP04114 4563 aaKnown RBP4.25□□□□□ -1.73
RGPD1-201ENST00000398193 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
RGPD1-201ENST00000398193 CYP4F30PQ9H0H9 118 aa4.24□□□□□ -1.73
RGPD1-201ENST00000398193 FAM229AH3BQW9 127 aa4.24□□□□□ -1.73
RGPD1-201ENST00000398193 LINC00313P59037 77 aa4.24□□□□□ -1.73
RGPD1-201ENST00000398193 LRP1BQ9NZR2 4599 aa4.23□□□□□ -1.73
RGPD1-201ENST00000398193 LOC101927531A0A1B0GV80 90 aa4.22□□□□□ -1.73
RGPD1-201ENST00000398193 Q8N9P0 234 aaPredicted RBP4.22□□□□□ -1.73
RGPD1-201ENST00000398193 C1orf64Q8NEQ6 169 aa4.21□□□□□ -1.74
RGPD1-201ENST00000398193 TENM2Q9NT68 2774 aa4.21□□□□□ -1.74
RGPD1-201ENST00000398193 KRTAP16-1A8MUX0 517 aa4.2□□□□□ -1.74
RGPD1-201ENST00000398193 KRTAP13-3Q3SY46 172 aa4.2□□□□□ -1.74
RGPD1-201ENST00000398193 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
RGPD1-201ENST00000398193 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
RGPD1-201ENST00000398193 NDUFS5O43920 106 aa4.18□□□□□ -1.74
RGPD1-201ENST00000398193 IGLV7-46A0A075B6I9 117 aa4.17□□□□□ -1.74
RGPD1-201ENST00000398193 SMIM26A0A096LP01 95 aa4.17□□□□□ -1.74
RGPD1-201ENST00000398193 OXTP01178 125 aa4.17□□□□□ -1.74
RGPD1-201ENST00000398193 SMR3BP02814 79 aaPredicted RBP4.16□□□□□ -1.74
RGPD1-201ENST00000398193 NOTCH2NLQ7Z3S9 236 aa4.16□□□□□ -1.74
RGPD1-201ENST00000398193 FP248Q71RG6 208 aaPredicted RBP4.15□□□□□ -1.74
RGPD1-201ENST00000398193 Q5VSD8 79 aa4.15□□□□□ -1.75
RGPD1-201ENST00000398193 KRTAP10-8P60410 259 aa4.14□□□□□ -1.75
RGPD1-201ENST00000398193 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
RGPD1-201ENST00000398193 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
RGPD1-201ENST00000398193 Q8N1X5 172 aa4.12□□□□□ -1.75
RGPD1-201ENST00000398193 V9GYY9 64 aa4.12□□□□□ -1.75
RGPD1-201ENST00000398193 Q5W150 140 aa4.11□□□□□ -1.75
RGPD1-201ENST00000398193 A8MUU9 505 aa4.11□□□□□ -1.75
RGPD1-201ENST00000398193 HSPG2P98160 4391 aa4.1□□□□□ -1.75
RGPD1-201ENST00000398193 TNXBP22105 4242 aa4.1□□□□□ -1.75
RGPD1-201ENST00000398193 Q1T7F1 81 aa4.09□□□□□ -1.76
RGPD1-201ENST00000398193 Q75L30 129 aa4.08□□□□□ -1.76
RGPD1-201ENST00000398193 FAT1Q14517 4588 aa4.08□□□□□ -1.76
RGPD1-201ENST00000398193 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
RGPD1-201ENST00000398193 A8MUN3 132 aa4.06□□□□□ -1.76
RGPD1-201ENST00000398193 ACYP2P14621 99 aa4.06□□□□□ -1.76
RGPD1-201ENST00000398193 C7orf65Q6ZTY9 151 aa4.05□□□□□ -1.76
RGPD1-201ENST00000398193 COA5Q86WW8 74 aa4.05□□□□□ -1.76
RGPD1-201ENST00000398193 PCOTHQ58A44 107 aa4.04□□□□□ -1.76
RGPD1-201ENST00000398193 TGP01266 2768 aa4.04□□□□□ -1.76
RGPD1-201ENST00000398193 HRES1P13985 223 aa4.03□□□□□ -1.76
RGPD1-201ENST00000398193 FAT3Q8TDW7 4589 aa4.03□□□□□ -1.76
RGPD1-201ENST00000398193 RYR1P21817 5038 aa4.02□□□□□ -1.77
RGPD1-201ENST00000398193 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
RGPD1-201ENST00000398193 MT1HL1P0DM35 61 aa4□□□□□ -1.77
RGPD1-201ENST00000398193 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
RGPD1-201ENST00000398193 KMT2CQ8NEZ4 4911 aaKnown RBP3.99□□□□□ -1.77
RGPD1-201ENST00000398193 PRR4Q16378 134 aa3.98□□□□□ -1.77
RGPD1-201ENST00000398193 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
RGPD1-201ENST00000398193 C9orf92A6NGG3 77 aa3.98□□□□□ -1.77
RGPD1-201ENST00000398193 SRRM2Q9UQ35 2752 aaKnown RBP3.97□□□□□ -1.77
RGPD1-201ENST00000398193 C4orf26Q17RF5 130 aa3.97□□□□□ -1.77
RGPD1-201ENST00000398193 RETNLBQ9BQ08 111 aa3.97□□□□□ -1.77
RGPD1-201ENST00000398193 RYR3Q15413 4870 aa3.97□□□□□ -1.77
RGPD1-201ENST00000398193 SPTSSBQ8NFR3 76 aa3.96□□□□□ -1.77
RGPD1-201ENST00000398193 TPRXLQ17RH7 258 aa3.96□□□□□ -1.78
RGPD1-201ENST00000398193 CHKB-CPT1BH3BT56 60 aa3.96□□□□□ -1.78
RGPD1-201ENST00000398193 ATP11AUNQ6ZP68 121 aa3.96□□□□□ -1.78
RGPD1-201ENST00000398193 XP32Q5T750 250 aa3.96□□□□□ -1.78
RGPD1-201ENST00000398193 KRTAP17-1Q9BYP8 105 aa3.94□□□□□ -1.78
RGPD1-201ENST00000398193 MPLKIPQ8TAP9 179 aa3.94□□□□□ -1.78
RGPD1-201ENST00000398193 PRR15LQ9BU68 103 aa3.93□□□□□ -1.78
RGPD1-201ENST00000398193 SPINK7P58062 85 aa3.91□□□□□ -1.78
RGPD1-201ENST00000398193 COX6B2Q6YFQ2 88 aa3.9□□□□□ -1.79
RGPD1-201ENST00000398193 Q5VV11 94 aa3.89□□□□□ -1.79
RGPD1-201ENST00000398193 MUC17Q685J3 4493 aa3.89□□□□□ -1.79
RGPD1-201ENST00000398193 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
RGPD1-201ENST00000398193 PSPHP1O15172 72 aa3.84□□□□□ -1.79
RGPD1-201ENST00000398193 KRTAP3-1Q9BYR8 98 aa3.83□□□□□ -1.8
RGPD1-201ENST00000398193 A0A1B0GU69 56 aa3.83□□□□□ -1.8
RGPD1-201ENST00000398193 FLG2Q5D862 2391 aaPredicted RBP3.83□□□□□ -1.8
RGPD1-201ENST00000398193 J3QL48 77 aa3.82□□□□□ -1.8
RGPD1-201ENST00000398193 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
RGPD1-201ENST00000398193 SEC61GP60059 68 aa3.82□□□□□ -1.8
RGPD1-201ENST00000398193 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
RGPD1-201ENST00000398193 SEC61BP60468 96 aaKnown RBP3.82□□□□□ -1.8
RGPD1-201ENST00000398193 MYCBP2O75592 4640 aa3.82□□□□□ -1.8
RGPD1-201ENST00000398193 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
RGPD1-201ENST00000398193 KRTAP4-5Q9BYR2 181 aa3.81□□□□□ -1.8
RGPD1-201ENST00000398193 BIRC6Q9NR09 4857 aa3.79□□□□□ -1.8
RGPD1-201ENST00000398193 EPPK1P58107 5090 aaKnown RBP3.79□□□□□ -1.8
RGPD1-201ENST00000398193 A6NED7 52 aa3.78□□□□□ -1.8
RGPD1-201ENST00000398193 H1FX-AS1Q4G0G2 97 aa3.78□□□□□ -1.8
RGPD1-201ENST00000398193 RBM12B-AS1Q9P1G2 102 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 589.2 ms