RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
SOCS6-201ENST00000397942 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
SOCS6-201ENST00000397942 DMDP11532 3685 aa7.42□□□□□ -1.22
SOCS6-201ENST00000397942 Q5W150 140 aa7.42□□□□□ -1.22
SOCS6-201ENST00000397942 LCA10Q71F78 164 aa7.41□□□□□ -1.22
SOCS6-201ENST00000397942 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
SOCS6-201ENST00000397942 Q6ZR54 194 aa7.36□□□□□ -1.23
SOCS6-201ENST00000397942 SPINK7P58062 85 aa7.36□□□□□ -1.23
SOCS6-201ENST00000397942 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
SOCS6-201ENST00000397942 CSMD1Q96PZ7 3565 aa7.35□□□□□ -1.23
SOCS6-201ENST00000397942 A0A087X002 238 aa7.35□□□□□ -1.23
SOCS6-201ENST00000397942 LINC00483Q53H64 154 aa7.35□□□□□ -1.23
SOCS6-201ENST00000397942 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
SOCS6-201ENST00000397942 ZFHX3Q15911 3703 aa7.34□□□□□ -1.23
SOCS6-201ENST00000397942 A0A0D9SG42 100 aa7.33□□□□□ -1.24
SOCS6-201ENST00000397942 A0A1B0GU33 70 aa7.33□□□□□ -1.24
SOCS6-201ENST00000397942 Q6ZRN7 208 aaPredicted RBP7.32□□□□□ -1.24
SOCS6-201ENST00000397942 SMG1Q96Q15 3661 aaKnown RBP7.31□□□□□ -1.24
SOCS6-201ENST00000397942 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
SOCS6-201ENST00000397942 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
SOCS6-201ENST00000397942 J3QL48 77 aa7.3□□□□□ -1.24
SOCS6-201ENST00000397942 LCE6AA0A183 80 aa7.28□□□□□ -1.24
SOCS6-201ENST00000397942 SVEP1Q4LDE5 3571 aa7.28□□□□□ -1.24
SOCS6-201ENST00000397942 FBN3Q75N90 2809 aa7.27□□□□□ -1.25
SOCS6-201ENST00000397942 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
SOCS6-201ENST00000397942 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
SOCS6-201ENST00000397942 LINC01554Q52M75 96 aa7.26□□□□□ -1.25
SOCS6-201ENST00000397942 COX6B2Q6YFQ2 88 aa7.26□□□□□ -1.25
SOCS6-201ENST00000397942 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
SOCS6-201ENST00000397942 KRTAP13-1Q8IUC0 172 aa7.23□□□□□ -1.25
SOCS6-201ENST00000397942 COL7A1Q02388 2944 aa7.22□□□□□ -1.25
SOCS6-201ENST00000397942 Q6ZSA8 131 aa7.19□□□□□ -1.26
SOCS6-201ENST00000397942 CSMD2Q7Z408 3487 aa7.16□□□□□ -1.26
SOCS6-201ENST00000397942 ASB16-AS1Q495Z4 193 aa7.13□□□□□ -1.27
SOCS6-201ENST00000397942 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
SOCS6-201ENST00000397942 A8MU10 97 aa7.11□□□□□ -1.27
SOCS6-201ENST00000397942 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
SOCS6-201ENST00000397942 MEGF8Q7Z7M0 2845 aa7.04□□□□□ -1.28
SOCS6-201ENST00000397942 Q5VSD8 79 aa7.03□□□□□ -1.28
SOCS6-201ENST00000397942 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
SOCS6-201ENST00000397942 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
SOCS6-201ENST00000397942 S4R3F8 94 aa7□□□□□ -1.29
SOCS6-201ENST00000397942 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
SOCS6-201ENST00000397942 NBPF19A0A087WUL8 3843 aa6.99□□□□□ -1.29
SOCS6-201ENST00000397942 H1FX-AS1Q4G0G2 97 aa6.97□□□□□ -1.29
SOCS6-201ENST00000397942 R4GN34 69 aa6.97□□□□□ -1.29
SOCS6-201ENST00000397942 A6NN06 94 aa6.95□□□□□ -1.3
SOCS6-201ENST00000397942 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
SOCS6-201ENST00000397942 SPENQ96T58 3664 aaKnown RBP6.92□□□□□ -1.3
SOCS6-201ENST00000397942 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
SOCS6-201ENST00000397942 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
SOCS6-201ENST00000397942 TRRAPQ9Y4A5 3859 aa6.87□□□□□ -1.31
SOCS6-201ENST00000397942 ROMO1P60602 79 aa6.86□□□□□ -1.31
SOCS6-201ENST00000397942 LUZP6Q538Z0 58 aa6.86□□□□□ -1.31
SOCS6-201ENST00000397942 KRTAP1-4P0C5Y4 121 aa6.86□□□□□ -1.31
SOCS6-201ENST00000397942 M0QZ58 72 aa6.82□□□□□ -1.32
SOCS6-201ENST00000397942 A8MUU9 505 aa6.8□□□□□ -1.32
SOCS6-201ENST00000397942 M0R2T5 61 aa6.8□□□□□ -1.32
SOCS6-201ENST00000397942 H3BS24 57 aa6.77□□□□□ -1.32
SOCS6-201ENST00000397942 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
SOCS6-201ENST00000397942 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
SOCS6-201ENST00000397942 KRTAP16-1A8MUX0 517 aa6.68□□□□□ -1.34
SOCS6-201ENST00000397942 KRTAP21-3Q3LHN1 58 aa6.67□□□□□ -1.34
SOCS6-201ENST00000397942 KRTAP13-3Q3SY46 172 aa6.62□□□□□ -1.35
SOCS6-201ENST00000397942 H0YAA0 97 aa6.56□□□□□ -1.36
SOCS6-201ENST00000397942 XP32Q5T750 250 aa6.56□□□□□ -1.36
SOCS6-201ENST00000397942 BSNQ9UPA5 3926 aa6.49□□□□□ -1.37
SOCS6-201ENST00000397942 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
SOCS6-201ENST00000397942 NDUFAF8A1L188 74 aa6.44□□□□□ -1.38
SOCS6-201ENST00000397942 P0C880 135 aa6.43□□□□□ -1.38
SOCS6-201ENST00000397942 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
SOCS6-201ENST00000397942 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
SOCS6-201ENST00000397942 VPS13CQ709C8 3753 aa6.39□□□□□ -1.39
SOCS6-201ENST00000397942 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
SOCS6-201ENST00000397942 ANK3Q12955 4377 aaKnown RBP6.38□□□□□ -1.39
SOCS6-201ENST00000397942 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
SOCS6-201ENST00000397942 CSMD3Q7Z407 3707 aa6.32□□□□□ -1.4
SOCS6-201ENST00000397942 A0A1B0GVY2 172 aa6.3□□□□□ -1.4
SOCS6-201ENST00000397942 TNP1P09430 55 aa6.29□□□□□ -1.4
SOCS6-201ENST00000397942 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
SOCS6-201ENST00000397942 ZNF469Q96JG9 3925 aaPredicted RBP6.24□□□□□ -1.41
SOCS6-201ENST00000397942 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
SOCS6-201ENST00000397942 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
SOCS6-201ENST00000397942 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
SOCS6-201ENST00000397942 KRTAP12-1P59990 96 aa6.06□□□□□ -1.44
SOCS6-201ENST00000397942 DNHD1Q96M86 4753 aa6.05□□□□□ -1.44
SOCS6-201ENST00000397942 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
SOCS6-201ENST00000397942 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
SOCS6-201ENST00000397942 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
SOCS6-201ENST00000397942 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
SOCS6-201ENST00000397942 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.47
SOCS6-201ENST00000397942 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.47
SOCS6-201ENST00000397942 HUWE1Q7Z6Z7 4374 aaKnown RBP5.88□□□□□ -1.47
SOCS6-201ENST00000397942 DNAH11Q96DT5 4516 aa5.86□□□□□ -1.47
SOCS6-201ENST00000397942 DNAH5Q8TE73 4624 aa5.85□□□□□ -1.47
SOCS6-201ENST00000397942 AKAP9Q99996 3911 aa5.82□□□□□ -1.48
SOCS6-201ENST00000397942 PLECQ15149 4684 aaKnown RBP5.8□□□□□ -1.48
SOCS6-201ENST00000397942 FAT1Q14517 4588 aa5.77□□□□□ -1.49
SOCS6-201ENST00000397942 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
SOCS6-201ENST00000397942 DNAH8Q96JB1 4490 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms