RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 RPL39P62891 51 aaKnown RBP1.29□□□□□ -2.2
CEP290-202ENST00000397838 AHCTF1Q8WYP5 2266 aa1.29□□□□□ -2.2
CEP290-202ENST00000397838 KALRNO60229 2985 aa1.28□□□□□ -2.2
CEP290-202ENST00000397838 CFAP46Q8IYW2 2715 aa1.28□□□□□ -2.2
CEP290-202ENST00000397838 I3L2K1 104 aa1.28□□□□□ -2.2
CEP290-202ENST00000397838 KRTAP4-1Q9BYQ7 146 aa1.28□□□□□ -2.2
CEP290-202ENST00000397838 DNAJC13O75165 2243 aa1.28□□□□□ -2.2
CEP290-202ENST00000397838 MTORP42345 2549 aa1.27□□□□□ -2.21
CEP290-202ENST00000397838 C6orf48Q9UBA6 75 aa1.27□□□□□ -2.21
CEP290-202ENST00000397838 CEP295Q9C0D2 2601 aa1.27□□□□□ -2.21
CEP290-202ENST00000397838 MINOS1Q5TGZ0 78 aa1.27□□□□□ -2.21
CEP290-202ENST00000397838 MRPL34Q9BQ48 92 aaKnown RBP1.27□□□□□ -2.21
CEP290-202ENST00000397838 CRIPTQ9P021 101 aa1.27□□□□□ -2.21
CEP290-202ENST00000397838 DEFB109BQ30KR1 87 aa1.26□□□□□ -2.21
CEP290-202ENST00000397838 WT1-ASQ06250 92 aa1.26□□□□□ -2.21
CEP290-202ENST00000397838 DNAH7Q8WXX0 4024 aa1.25□□□□□ -2.21
CEP290-202ENST00000397838 TNCP24821 2201 aa1.25□□□□□ -2.21
CEP290-202ENST00000397838 H3BUA1 57 aa1.25□□□□□ -2.21
CEP290-202ENST00000397838 RIF1Q5UIP0 2472 aaKnown RBP1.24□□□□□ -2.21
CEP290-202ENST00000397838 PLCE1Q9P212 2302 aa1.24□□□□□ -2.21
CEP290-202ENST00000397838 STARD9Q9P2P6 4700 aa1.24□□□□□ -2.21
CEP290-202ENST00000397838 COX14Q96I36 57 aa1.24□□□□□ -2.21
CEP290-202ENST00000397838 USH2AO75445 5202 aa1.23□□□□□ -2.21
CEP290-202ENST00000397838 GOLGA4Q13439 2230 aaKnown RBP1.23□□□□□ -2.21
CEP290-202ENST00000397838 RPL39P5Q59GN2 51 aa1.23□□□□□ -2.21
CEP290-202ENST00000397838 MMP24-AS1A0A0U1RRL7 71 aa1.22□□□□□ -2.21
CEP290-202ENST00000397838 COX6A2Q02221 97 aa1.22□□□□□ -2.21
CEP290-202ENST00000397838 LRP1BQ9NZR2 4599 aa1.22□□□□□ -2.21
CEP290-202ENST00000397838 CHD9Q3L8U1 2897 aa1.22□□□□□ -2.21
CEP290-202ENST00000397838 USP9YO00507 2555 aaPredicted RBP1.22□□□□□ -2.21
CEP290-202ENST00000397838 KAAG1Q9UBP8 84 aa1.21□□□□□ -2.22
CEP290-202ENST00000397838 ANK2Q01484 3957 aa1.21□□□□□ -2.22
CEP290-202ENST00000397838 A8MTW9 85 aa1.21□□□□□ -2.22
CEP290-202ENST00000397838 WFDC13Q8IUB5 93 aa1.21□□□□□ -2.22
CEP290-202ENST00000397838 WDFY4Q6ZS81 3184 aa1.21□□□□□ -2.22
CEP290-202ENST00000397838 H1FX-AS1Q4G0G2 97 aa1.2□□□□□ -2.22
CEP290-202ENST00000397838 WFDC10BQ8IUB3 73 aa1.2□□□□□ -2.22
CEP290-202ENST00000397838 LEAP2Q969E1 77 aa1.2□□□□□ -2.22
CEP290-202ENST00000397838 PKD1L1Q8TDX9 2849 aa1.2□□□□□ -2.22
CEP290-202ENST00000397838 H0YGG7 62 aa1.19□□□□□ -2.22
CEP290-202ENST00000397838 MYCBP2O75592 4640 aa1.19□□□□□ -2.22
CEP290-202ENST00000397838 H0YAA0 97 aa1.19□□□□□ -2.22
CEP290-202ENST00000397838 H3BUX3 64 aa1.19□□□□□ -2.22
CEP290-202ENST00000397838 DEFB108AA8MXU0 73 aa1.18□□□□□ -2.22
CEP290-202ENST00000397838 SPRR1BP22528 89 aa1.18□□□□□ -2.22
CEP290-202ENST00000397838 SPTBN2O15020 2390 aa1.18□□□□□ -2.22
CEP290-202ENST00000397838 TPRP12270 2363 aaKnown RBP1.18□□□□□ -2.22
CEP290-202ENST00000397838 SPRR1AP35321 89 aa1.18□□□□□ -2.22
CEP290-202ENST00000397838 TOMM7Q9P0U1 55 aa1.18□□□□□ -2.22
CEP290-202ENST00000397838 CLPSL2Q6UWE3 100 aa1.17□□□□□ -2.22
CEP290-202ENST00000397838 NOP10Q9NPE3 64 aaKnown RBP1.17□□□□□ -2.22
CEP290-202ENST00000397838 FRAS1Q86XX4 4008 aa1.17□□□□□ -2.22
CEP290-202ENST00000397838 ALMS1Q8TCU4 4167 aa1.17□□□□□ -2.22
CEP290-202ENST00000397838 IGF2RP11717 2491 aa1.16□□□□□ -2.22
CEP290-202ENST00000397838 CACNA1EQ15878 2313 aa1.16□□□□□ -2.22
CEP290-202ENST00000397838 HSPG2P98160 4391 aa1.16□□□□□ -2.22
CEP290-202ENST00000397838 Q5VSD8 79 aa1.15□□□□□ -2.23
CEP290-202ENST00000397838 Q9Y3F1 56 aa1.15□□□□□ -2.23
CEP290-202ENST00000397838 USF3Q68DE3 2245 aa1.15□□□□□ -2.23
CEP290-202ENST00000397838 MGAM2Q2M2H8 2515 aa1.15□□□□□ -2.23
CEP290-202ENST00000397838 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CEP290-202ENST00000397838 DEFB130BP0DP73 79 aa1.13□□□□□ -2.23
CEP290-202ENST00000397838 DEFB130AP0DP74 79 aa1.13□□□□□ -2.23
CEP290-202ENST00000397838 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
CEP290-202ENST00000397838 PRO0255Q9UI72 69 aa1.12□□□□□ -2.23
CEP290-202ENST00000397838 MXRA5Q9NR99 2828 aa1.12□□□□□ -2.23
CEP290-202ENST00000397838 LRP2P98164 4655 aa1.11□□□□□ -2.23
CEP290-202ENST00000397838 TENM2Q9NT68 2774 aa1.11□□□□□ -2.23
CEP290-202ENST00000397838 CEP290O15078 2479 aa1.11□□□□□ -2.23
CEP290-202ENST00000397838 CELSR2Q9HCU4 2923 aa1.1□□□□□ -2.23
CEP290-202ENST00000397838 STATHP02808 62 aa1.1□□□□□ -2.23
CEP290-202ENST00000397838 CSMD3Q7Z407 3707 aa1.1□□□□□ -2.23
CEP290-202ENST00000397838 ZFHX4Q86UP3 3567 aa1.1□□□□□ -2.23
CEP290-202ENST00000397838 LELP1Q5T871 98 aa1.1□□□□□ -2.23
CEP290-202ENST00000397838 RHPN1-AS1Q9BWJ2 59 aa1.1□□□□□ -2.23
CEP290-202ENST00000397838 TLN2Q9Y4G6 2542 aa1.09□□□□□ -2.23
CEP290-202ENST00000397838 DEFB105AQ8NG35 78 aa1.09□□□□□ -2.23
CEP290-202ENST00000397838 DOPEY2Q9Y3R5 2298 aa1.08□□□□□ -2.24
CEP290-202ENST00000397838 SPTA1P02549 2419 aa1.08□□□□□ -2.24
CEP290-202ENST00000397838 CEP250Q9BV73 2442 aa1.08□□□□□ -2.24
CEP290-202ENST00000397838 S4R3F8 94 aa1.08□□□□□ -2.24
CEP290-202ENST00000397838 PTPRQQ9UMZ3 2332 aa1.06□□□□□ -2.24
CEP290-202ENST00000397838 PRLHP81277 87 aa1.06□□□□□ -2.24
CEP290-202ENST00000397838 URB1O60287 2271 aaKnown RBP1.06□□□□□ -2.24
CEP290-202ENST00000397838 M0QZ58 72 aa1.06□□□□□ -2.24
CEP290-202ENST00000397838 BPTFQ12830 3046 aa1.05□□□□□ -2.24
CEP290-202ENST00000397838 AKAP13Q12802 2813 aa1.05□□□□□ -2.24
CEP290-202ENST00000397838 DEFB104AQ8WTQ1 72 aa1.05□□□□□ -2.24
CEP290-202ENST00000397838 DMBT1Q9UGM3 2413 aaPredicted RBP1.04□□□□□ -2.24
CEP290-202ENST00000397838 PIEZO2Q9H5I5 2752 aa1.04□□□□□ -2.24
CEP290-202ENST00000397838 H3BNG1 76 aa1.04□□□□□ -2.24
CEP290-202ENST00000397838 APELAP0DMC3 54 aa1.04□□□□□ -2.24
CEP290-202ENST00000397838 APLNQ9ULZ1 77 aa1.04□□□□□ -2.24
CEP290-202ENST00000397838 PTPRZ1P23471 2315 aaPredicted RBP1.04□□□□□ -2.24
CEP290-202ENST00000397838 DEFB110Q30KQ9 67 aa1.03□□□□□ -2.24
CEP290-202ENST00000397838 DEFB124Q8NES8 71 aa1.03□□□□□ -2.24
CEP290-202ENST00000397838 NF1P21359 2839 aa1.02□□□□□ -2.25
CEP290-202ENST00000397838 SMR3AQ99954 134 aa1.01□□□□□ -2.25
CEP290-202ENST00000397838 DEFB108BQ8NET1 73 aa1.01□□□□□ -2.25
CEP290-202ENST00000397838 SPTBN1Q01082 2364 aaKnown RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms