RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-207ENST00000397200 MYCBP2O75592 4640 aa8.69□□□□□ -1.02
CAPN3-207ENST00000397200 H7BZZ5 65 aa8.68□□□□□ -1.02
CAPN3-207ENST00000397200 SSBP3-AS1Q7Z2R9 100 aa8.68□□□□□ -1.02
CAPN3-207ENST00000397200 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
CAPN3-207ENST00000397200 KRTAP10-8P60410 259 aa8.67□□□□□ -1.02
CAPN3-207ENST00000397200 CD164Q04900 197 aa8.67□□□□□ -1.02
CAPN3-207ENST00000397200 A0A0U1RQV1 116 aa8.66□□□□□ -1.02
CAPN3-207ENST00000397200 NDUFC1O43677 76 aa8.65□□□□□ -1.03
CAPN3-207ENST00000397200 SNURFQ9Y675 71 aa8.65□□□□□ -1.03
CAPN3-207ENST00000397200 HRCT1Q6UXD1 115 aa8.64□□□□□ -1.03
CAPN3-207ENST00000397200 MMP24-AS1A0A0U1RRL7 71 aa8.63□□□□□ -1.03
CAPN3-207ENST00000397200 MT1HL1P0DM35 61 aa8.63□□□□□ -1.03
CAPN3-207ENST00000397200 PCLOQ9Y6V0 5065 aa8.63□□□□□ -1.03
CAPN3-207ENST00000397200 WFDC13Q8IUB5 93 aa8.62□□□□□ -1.03
CAPN3-207ENST00000397200 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
CAPN3-207ENST00000397200 CASC2Q6XLA1 102 aa8.62□□□□□ -1.03
CAPN3-207ENST00000397200 LINC00304Q8N9R0 145 aa8.62□□□□□ -1.03
CAPN3-207ENST00000397200 J3QL48 77 aa8.61□□□□□ -1.03
CAPN3-207ENST00000397200 NDUFB1O75438 58 aa8.61□□□□□ -1.03
CAPN3-207ENST00000397200 TNXBP22105 4242 aa8.6□□□□□ -1.03
CAPN3-207ENST00000397200 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
CAPN3-207ENST00000397200 FAM236DA0A1B0GTK5 79 aa8.58□□□□□ -1.04
CAPN3-207ENST00000397200 FAM236CP0DP71 79 aa8.58□□□□□ -1.04
CAPN3-207ENST00000397200 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
CAPN3-207ENST00000397200 C5orf47Q569G3 176 aa8.58□□□□□ -1.04
CAPN3-207ENST00000397200 ZCCHC13Q8WW36 166 aaKnown RBP8.58□□□□□ -1.04
CAPN3-207ENST00000397200 SPAG11AQ6PDA7 123 aa8.58□□□□□ -1.04
CAPN3-207ENST00000397200 A0A1B0GVX0 72 aa8.57□□□□□ -1.04
CAPN3-207ENST00000397200 Q5XG85 94 aa8.55□□□□□ -1.04
CAPN3-207ENST00000397200 SPINK1P00995 79 aa8.54□□□□□ -1.04
CAPN3-207ENST00000397200 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-207ENST00000397200 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-207ENST00000397200 C8orf17Q9NRJ1 99 aa8.54□□□□□ -1.04
CAPN3-207ENST00000397200 hDV103S1A0JD37 113 aa8.54□□□□□ -1.04
CAPN3-207ENST00000397200 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-207ENST00000397200 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
CAPN3-207ENST00000397200 H3BPC8 53 aa8.5□□□□□ -1.05
CAPN3-207ENST00000397200 LIMD2Q9BT23 127 aa8.49□□□□□ -1.05
CAPN3-207ENST00000397200 IGHV6-1A0A0B4J1U7 121 aa8.48□□□□□ -1.05
CAPN3-207ENST00000397200 MP68P56378 58 aa8.47□□□□□ -1.05
CAPN3-207ENST00000397200 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
CAPN3-207ENST00000397200 H0Y9P7 68 aa8.46□□□□□ -1.06
CAPN3-207ENST00000397200 SERP1Q9Y6X1 66 aa8.46□□□□□ -1.06
CAPN3-207ENST00000397200 MRPL34Q9BQ48 92 aaKnown RBP8.45□□□□□ -1.06
CAPN3-207ENST00000397200 NOTCH2NLQ7Z3S9 236 aa8.44□□□□□ -1.06
CAPN3-207ENST00000397200 TRAV22A0A0B4J277 110 aa8.43□□□□□ -1.06
CAPN3-207ENST00000397200 C8orf87E5RJ46 101 aa8.43□□□□□ -1.06
CAPN3-207ENST00000397200 C1orf195Q5TG92 126 aa8.43□□□□□ -1.06
CAPN3-207ENST00000397200 LINC00208Q96KT6 92 aa8.41□□□□□ -1.06
CAPN3-207ENST00000397200 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
CAPN3-207ENST00000397200 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
CAPN3-207ENST00000397200 RETNLBQ9BQ08 111 aa8.39□□□□□ -1.07
CAPN3-207ENST00000397200 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
CAPN3-207ENST00000397200 CYP4F30PQ9H0H9 118 aa8.36□□□□□ -1.07
CAPN3-207ENST00000397200 SPANXA2-OT1Q8N9U9 137 aa8.34□□□□□ -1.07
CAPN3-207ENST00000397200 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
CAPN3-207ENST00000397200 NDUFS5O43920 106 aa8.32□□□□□ -1.08
CAPN3-207ENST00000397200 SVIPQ8NHG7 77 aa8.32□□□□□ -1.08
CAPN3-207ENST00000397200 LINC00313P59037 77 aa8.32□□□□□ -1.08
CAPN3-207ENST00000397200 PRR4Q16378 134 aa8.32□□□□□ -1.08
CAPN3-207ENST00000397200 FP248Q71RG6 208 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-207ENST00000397200 KRTAP16-1A8MUX0 517 aa8.31□□□□□ -1.08
CAPN3-207ENST00000397200 Q8N9P0 234 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-207ENST00000397200 HERC1Q15751 4861 aa8.29□□□□□ -1.08
CAPN3-207ENST00000397200 IGLV7-46A0A075B6I9 117 aa8.28□□□□□ -1.08
CAPN3-207ENST00000397200 SMIM26A0A096LP01 95 aa8.27□□□□□ -1.09
CAPN3-207ENST00000397200 Q5W150 140 aa8.26□□□□□ -1.09
CAPN3-207ENST00000397200 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
CAPN3-207ENST00000397200 TPRXLQ17RH7 258 aa8.18□□□□□ -1.1
CAPN3-207ENST00000397200 PCOTHQ58A44 107 aa8.18□□□□□ -1.1
CAPN3-207ENST00000397200 C9orf92A6NGG3 77 aa8.16□□□□□ -1.1
CAPN3-207ENST00000397200 HMCN2Q8NDA2 5059 aa8.15□□□□□ -1.1
CAPN3-207ENST00000397200 IGKV2-30P06310 120 aa8.12□□□□□ -1.11
CAPN3-207ENST00000397200 C4orf26Q17RF5 130 aa8.12□□□□□ -1.11
CAPN3-207ENST00000397200 LPAP08519 4548 aa8.08□□□□□ -1.12
CAPN3-207ENST00000397200 Q1T7F1 81 aa8.07□□□□□ -1.12
CAPN3-207ENST00000397200 XP32Q5T750 250 aa8.07□□□□□ -1.12
CAPN3-207ENST00000397200 COA5Q86WW8 74 aa8.07□□□□□ -1.12
CAPN3-207ENST00000397200 C20orf166-AS1Q96NR2 134 aa8.05□□□□□ -1.12
CAPN3-207ENST00000397200 A8MUU9 505 aa8.04□□□□□ -1.12
CAPN3-207ENST00000397200 HRES1P13985 223 aa8.03□□□□□ -1.12
CAPN3-207ENST00000397200 MPLKIPQ8TAP9 179 aa8.03□□□□□ -1.12
CAPN3-207ENST00000397200 LRP2P98164 4655 aa8.01□□□□□ -1.13
CAPN3-207ENST00000397200 DMAC1Q96GE9 116 aa8□□□□□ -1.13
CAPN3-207ENST00000397200 Q75L30 129 aa7.98□□□□□ -1.13
CAPN3-207ENST00000397200 V9GYY9 64 aa7.98□□□□□ -1.13
CAPN3-207ENST00000397200 RPL37P61927 97 aaKnown RBP7.97□□□□□ -1.13
CAPN3-207ENST00000397200 IGKV2D-30A0A075B6S6 120 aa7.96□□□□□ -1.14
CAPN3-207ENST00000397200 C7orf65Q6ZTY9 151 aa7.95□□□□□ -1.14
CAPN3-207ENST00000397200 ACYP2P14621 99 aa7.94□□□□□ -1.14
CAPN3-207ENST00000397200 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
CAPN3-207ENST00000397200 ATP11AUNQ6ZP68 121 aa7.9□□□□□ -1.14
CAPN3-207ENST00000397200 LINC01558Q9Y6Z2 57 aa7.85□□□□□ -1.15
CAPN3-207ENST00000397200 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
CAPN3-207ENST00000397200 A8MUN3 132 aa7.84□□□□□ -1.15
CAPN3-207ENST00000397200 PSPHP1O15172 72 aa7.84□□□□□ -1.15
CAPN3-207ENST00000397200 Q5VV11 94 aa7.84□□□□□ -1.15
CAPN3-207ENST00000397200 MUC17Q685J3 4493 aa7.84□□□□□ -1.16
CAPN3-207ENST00000397200 PRR15LQ9BU68 103 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms