RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 ATP11AUNQ6ZP68 121 aa11.14□□□□□ -0.63
SEC13-207ENST00000397105 IGHV6-1A0A0B4J1U7 121 aa11.12□□□□□ -0.63
SEC13-207ENST00000397105 C20orf166-AS1Q96NR2 134 aa11.12□□□□□ -0.63
SEC13-207ENST00000397105 SMCPP49901 116 aaPredicted RBP11.11□□□□□ -0.63
SEC13-207ENST00000397105 GTF2H5Q6ZYL4 71 aa11.1□□□□□ -0.63
SEC13-207ENST00000397105 A0A1B0GVX0 72 aa11.09□□□□□ -0.63
SEC13-207ENST00000397105 A8MUU9 505 aa11.09□□□□□ -0.63
SEC13-207ENST00000397105 NREPQ16612 68 aa11.09□□□□□ -0.63
SEC13-207ENST00000397105 PRO0461Q9UI25 63 aa11.08□□□□□ -0.64
SEC13-207ENST00000397105 NOTCH2NLQ7Z3S9 236 aa11.07□□□□□ -0.64
SEC13-207ENST00000397105 C8orf87E5RJ46 101 aa11.06□□□□□ -0.64
SEC13-207ENST00000397105 NDUFB1O75438 58 aa11.06□□□□□ -0.64
SEC13-207ENST00000397105 KRTAP16-1A8MUX0 517 aa11.04□□□□□ -0.64
SEC13-207ENST00000397105 A8MWP4 228 aa11.02□□□□□ -0.65
SEC13-207ENST00000397105 F8W1H4 67 aa10.99□□□□□ -0.65
SEC13-207ENST00000397105 IGKV3D-7A0A0C4DH55 119 aa10.96□□□□□ -0.65
SEC13-207ENST00000397105 LCE2AQ5TA79 106 aaPredicted RBP10.95□□□□□ -0.66
SEC13-207ENST00000397105 PRR15Q8IV56 129 aa10.93□□□□□ -0.66
SEC13-207ENST00000397105 C8orf17Q9NRJ1 99 aa10.92□□□□□ -0.66
SEC13-207ENST00000397105 BPY2O14599 106 aa10.91□□□□□ -0.66
SEC13-207ENST00000397105 Q6ZVQ6 151 aa10.9□□□□□ -0.66
SEC13-207ENST00000397105 KRTAP19-2Q3LHN2 52 aa10.89□□□□□ -0.67
SEC13-207ENST00000397105 ETDBQ3ZM63 59 aa10.87□□□□□ -0.67
SEC13-207ENST00000397105 LCE2CQ5TA81 110 aa10.87□□□□□ -0.67
SEC13-207ENST00000397105 Q8N9P0 234 aaPredicted RBP10.85□□□□□ -0.67
SEC13-207ENST00000397105 K7EQZ3 153 aa10.84□□□□□ -0.67
SEC13-207ENST00000397105 UBL5Q9BZL1 73 aa10.84□□□□□ -0.67
SEC13-207ENST00000397105 LINC00846Q9NV44 126 aa10.84□□□□□ -0.67
SEC13-207ENST00000397105 COX6B2Q6YFQ2 88 aa10.82□□□□□ -0.68
SEC13-207ENST00000397105 MMP24-AS1A0A0U1RRL7 71 aa10.79□□□□□ -0.68
SEC13-207ENST00000397105 ZCCHC13Q8WW36 166 aaKnown RBP10.79□□□□□ -0.68
SEC13-207ENST00000397105 TMEM254Q8TBM7 123 aa10.78□□□□□ -0.68
SEC13-207ENST00000397105 hDV103S1A0JD37 113 aa10.76□□□□□ -0.69
SEC13-207ENST00000397105 MRPL34Q9BQ48 92 aaKnown RBP10.76□□□□□ -0.69
SEC13-207ENST00000397105 MT1HP80294 61 aa10.74□□□□□ -0.69
SEC13-207ENST00000397105 Q8N9L7 120 aa10.73□□□□□ -0.69
SEC13-207ENST00000397105 NDUFS5O43920 106 aa10.68□□□□□ -0.7
SEC13-207ENST00000397105 A0A1B0GV90 55 aa10.67□□□□□ -0.7
SEC13-207ENST00000397105 CASC2Q6XLA1 102 aa10.67□□□□□ -0.7
SEC13-207ENST00000397105 WFDC13Q8IUB5 93 aa10.66□□□□□ -0.7
SEC13-207ENST00000397105 FLGP20930 4061 aaPredicted RBP10.65□□□□□ -0.7
SEC13-207ENST00000397105 ACYP1P07311 99 aa10.65□□□□□ -0.7
SEC13-207ENST00000397105 SPINK7P58062 85 aa10.65□□□□□ -0.7
SEC13-207ENST00000397105 CXCL6P80162 114 aa10.64□□□□□ -0.71
SEC13-207ENST00000397105 HRES1P13985 223 aa10.62□□□□□ -0.71
SEC13-207ENST00000397105 RBM12B-AS1Q9P1G2 102 aa10.62□□□□□ -0.71
SEC13-207ENST00000397105 M0R2T5 61 aa10.61□□□□□ -0.71
SEC13-207ENST00000397105 FAM240AA0A1B0GVK7 77 aa10.59□□□□□ -0.71
SEC13-207ENST00000397105 HCG22E2RYF7 251 aa10.59□□□□□ -0.71
SEC13-207ENST00000397105 FAM236DA0A1B0GTK5 79 aa10.58□□□□□ -0.72
SEC13-207ENST00000397105 FAM236CP0DP71 79 aa10.58□□□□□ -0.72
SEC13-207ENST00000397105 MPLKIPQ8TAP9 179 aa10.58□□□□□ -0.72
SEC13-207ENST00000397105 Q5W150 140 aa10.5□□□□□ -0.73
SEC13-207ENST00000397105 KRTAP10-6P60371 365 aaPredicted RBP10.48□□□□□ -0.73
SEC13-207ENST00000397105 ATP5EP2Q5VTU8 51 aa10.47□□□□□ -0.73
SEC13-207ENST00000397105 LORP23490 312 aaPredicted RBP10.46□□□□□ -0.73
SEC13-207ENST00000397105 IGKV2D-30A0A075B6S6 120 aa10.42□□□□□ -0.74
SEC13-207ENST00000397105 IGKV2-30P06310 120 aa10.42□□□□□ -0.74
SEC13-207ENST00000397105 TP53AIP1Q9HCN2 124 aa10.42□□□□□ -0.74
SEC13-207ENST00000397105 C7orf65Q6ZTY9 151 aa10.41□□□□□ -0.74
SEC13-207ENST00000397105 KRTAP9-2Q9BYQ4 174 aa10.41□□□□□ -0.74
SEC13-207ENST00000397105 LINC00643Q86TS7 51 aa10.39□□□□□ -0.75
SEC13-207ENST00000397105 J3QR89 54 aa10.37□□□□□ -0.75
SEC13-207ENST00000397105 HIST1H4AP62805 103 aaKnown RBP10.37□□□□□ -0.75
SEC13-207ENST00000397105 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
SEC13-207ENST00000397105 H1FX-AS1Q4G0G2 97 aa10.24□□□□□ -0.77
SEC13-207ENST00000397105 A0A087WVE0 104 aa10.22□□□□□ -0.77
SEC13-207ENST00000397105 C4orf26Q17RF5 130 aa10.21□□□□□ -0.77
SEC13-207ENST00000397105 KRTAP9-8Q9BYQ0 159 aa10.2□□□□□ -0.78
SEC13-207ENST00000397105 TRAV22A0A0B4J277 110 aa10.18□□□□□ -0.78
SEC13-207ENST00000397105 UQCRQO14949 82 aa10.18□□□□□ -0.78
SEC13-207ENST00000397105 CYP4F30PQ9H0H9 118 aa10.13□□□□□ -0.79
SEC13-207ENST00000397105 LOC101927531A0A1B0GV80 90 aa10.12□□□□□ -0.79
SEC13-207ENST00000397105 ATOX1O00244 68 aa10.1□□□□□ -0.79
SEC13-207ENST00000397105 K7ERU9 68 aa10.09□□□□□ -0.79
SEC13-207ENST00000397105 MT2AP02795 61 aa10.09□□□□□ -0.79
SEC13-207ENST00000397105 FSIP2Q5CZC0 6907 aa10.09□□□□□ -0.79
SEC13-207ENST00000397105 H0Y9P7 68 aa10.08□□□□□ -0.8
SEC13-207ENST00000397105 C1orf64Q8NEQ6 169 aa10.08□□□□□ -0.8
SEC13-207ENST00000397105 KRTAP3-1Q9BYR8 98 aa10.04□□□□□ -0.8
SEC13-207ENST00000397105 OCR1Q9BZK8 76 aa10.02□□□□□ -0.81
SEC13-207ENST00000397105 MT1FP04733 61 aa10.01□□□□□ -0.81
SEC13-207ENST00000397105 KRTAP10-10P60014 251 aa10.01□□□□□ -0.81
SEC13-207ENST00000397105 SCGB1A1P11684 91 aa9.99□□□□□ -0.81
SEC13-207ENST00000397105 MP68P56378 58 aa9.98□□□□□ -0.81
SEC13-207ENST00000397105 IMUPQ9GZP8 106 aa9.98□□□□□ -0.81
SEC13-207ENST00000397105 KRTAP9-6A0A140TA67 174 aa9.96□□□□□ -0.82
SEC13-207ENST00000397105 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
SEC13-207ENST00000397105 LINC00208Q96KT6 92 aa9.95□□□□□ -0.82
SEC13-207ENST00000397105 S4R3F8 94 aa9.95□□□□□ -0.82
SEC13-207ENST00000397105 MT-ATP8P03928 68 aa9.93□□□□□ -0.82
SEC13-207ENST00000397105 CRCT1Q9UGL9 99 aa9.91□□□□□ -0.82
SEC13-207ENST00000397105 KRTAP9-3Q9BYQ3 159 aa9.88□□□□□ -0.83
SEC13-207ENST00000397105 LCA10Q71F78 164 aa9.87□□□□□ -0.83
SEC13-207ENST00000397105 H3BPC8 53 aa9.86□□□□□ -0.83
SEC13-207ENST00000397105 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
SEC13-207ENST00000397105 USH2AO75445 5202 aa9.85□□□□□ -0.83
SEC13-207ENST00000397105 KLKP1Q107X0 134 aa9.83□□□□□ -0.84
SEC13-207ENST00000397105 A8MUN3 132 aa9.78□□□□□ -0.84
SEC13-207ENST00000397105 SMIM20Q8N5G0 67 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms