RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
ATP2A3-206ENST00000397043 MRPL34Q9BQ48 92 aaKnown RBP9.47□□□□□ -0.89
ATP2A3-206ENST00000397043 SPAG11AQ6PDA7 123 aa9.45□□□□□ -0.9
ATP2A3-206ENST00000397043 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
ATP2A3-206ENST00000397043 PLAC8Q9NZF1 115 aa9.45□□□□□ -0.9
ATP2A3-206ENST00000397043 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
ATP2A3-206ENST00000397043 DYNC2H1Q8NCM8 4307 aaKnown RBP9.44□□□□□ -0.9
ATP2A3-206ENST00000397043 DNAH8Q96JB1 4490 aa9.43□□□□□ -0.9
ATP2A3-206ENST00000397043 IGLV7-46A0A075B6I9 117 aa9.43□□□□□ -0.9
ATP2A3-206ENST00000397043 HECTD4Q9Y4D8 3996 aa9.43□□□□□ -0.9
ATP2A3-206ENST00000397043 Q5VV11 94 aa9.42□□□□□ -0.9
ATP2A3-206ENST00000397043 VPS13DQ5THJ4 4388 aa9.42□□□□□ -0.9
ATP2A3-206ENST00000397043 IGLV7-43P04211 117 aa9.42□□□□□ -0.9
ATP2A3-206ENST00000397043 DNAH2Q9P225 4427 aa9.41□□□□□ -0.9
ATP2A3-206ENST00000397043 Q6ZR54 194 aa9.4□□□□□ -0.9
ATP2A3-206ENST00000397043 LIMD2Q9BT23 127 aa9.4□□□□□ -0.9
ATP2A3-206ENST00000397043 A6NED7 52 aa9.4□□□□□ -0.91
ATP2A3-206ENST00000397043 DNAH17Q9UFH2 4485 aa9.37□□□□□ -0.91
ATP2A3-206ENST00000397043 ASB16-AS1Q495Z4 193 aa9.36□□□□□ -0.91
ATP2A3-206ENST00000397043 Q5W150 140 aa9.35□□□□□ -0.91
ATP2A3-206ENST00000397043 KRTAP10-2P60368 255 aa9.34□□□□□ -0.91
ATP2A3-206ENST00000397043 DNAH6Q9C0G6 4158 aa9.31□□□□□ -0.92
ATP2A3-206ENST00000397043 HRES1P13985 223 aa9.31□□□□□ -0.92
ATP2A3-206ENST00000397043 PRR26Q8N8Z3 221 aa9.3□□□□□ -0.92
ATP2A3-206ENST00000397043 DNHD1Q96M86 4753 aa9.29□□□□□ -0.92
ATP2A3-206ENST00000397043 DNAH11Q96DT5 4516 aa9.28□□□□□ -0.92
ATP2A3-206ENST00000397043 LOC101927531A0A1B0GV80 90 aa9.27□□□□□ -0.93
ATP2A3-206ENST00000397043 LINC00313P59037 77 aa9.26□□□□□ -0.93
ATP2A3-206ENST00000397043 SSBP3-AS1Q7Z2R9 100 aa9.25□□□□□ -0.93
ATP2A3-206ENST00000397043 LCA10Q71F78 164 aa9.22□□□□□ -0.93
ATP2A3-206ENST00000397043 Q75L30 129 aa9.21□□□□□ -0.93
ATP2A3-206ENST00000397043 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
ATP2A3-206ENST00000397043 KRTAP13-2Q52LG2 175 aa9.18□□□□□ -0.94
ATP2A3-206ENST00000397043 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
ATP2A3-206ENST00000397043 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
ATP2A3-206ENST00000397043 C8orf87E5RJ46 101 aa9.17□□□□□ -0.94
ATP2A3-206ENST00000397043 LINC01558Q9Y6Z2 57 aa9.17□□□□□ -0.94
ATP2A3-206ENST00000397043 SPINK7P58062 85 aa9.17□□□□□ -0.94
ATP2A3-206ENST00000397043 RBM12B-AS1Q9P1G2 102 aa9.16□□□□□ -0.94
ATP2A3-206ENST00000397043 ACYP2P14621 99 aa9.16□□□□□ -0.94
ATP2A3-206ENST00000397043 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
ATP2A3-206ENST00000397043 LRP1BQ9NZR2 4599 aa9.15□□□□□ -0.94
ATP2A3-206ENST00000397043 ALMS1Q8TCU4 4167 aa9.14□□□□□ -0.95
ATP2A3-206ENST00000397043 FAM229AH3BQW9 127 aa9.14□□□□□ -0.95
ATP2A3-206ENST00000397043 DNAH5Q8TE73 4624 aa9.14□□□□□ -0.95
ATP2A3-206ENST00000397043 PLA2G1BP04054 148 aaKnown RBP9.12□□□□□ -0.95
ATP2A3-206ENST00000397043 KRTAP13-3Q3SY46 172 aa9.12□□□□□ -0.95
ATP2A3-206ENST00000397043 PRAC1Q96KF2 57 aa9.1□□□□□ -0.95
ATP2A3-206ENST00000397043 CDC42SE1Q9NRR8 79 aa9.09□□□□□ -0.95
ATP2A3-206ENST00000397043 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
ATP2A3-206ENST00000397043 TYMSOSQ8TAI1 123 aa9.08□□□□□ -0.96
ATP2A3-206ENST00000397043 HYDINQ4G0P3 5121 aa9.06□□□□□ -0.96
ATP2A3-206ENST00000397043 SPINK1P00995 79 aa9.03□□□□□ -0.96
ATP2A3-206ENST00000397043 DMAC1Q96GE9 116 aa9.02□□□□□ -0.96
ATP2A3-206ENST00000397043 A0A1B0GU69 56 aa9.02□□□□□ -0.97
ATP2A3-206ENST00000397043 KRTAP1-4P0C5Y4 121 aa9.02□□□□□ -0.97
ATP2A3-206ENST00000397043 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
ATP2A3-206ENST00000397043 VPS13BQ7Z7G8 4022 aa9.01□□□□□ -0.97
ATP2A3-206ENST00000397043 SMR3BP02814 79 aaPredicted RBP9.01□□□□□ -0.97
ATP2A3-206ENST00000397043 KTN1-AS1Q86SY8 53 aa9.01□□□□□ -0.97
ATP2A3-206ENST00000397043 ADM2Q7Z4H4 148 aa9□□□□□ -0.97
ATP2A3-206ENST00000397043 Q6ZSA8 131 aa9□□□□□ -0.97
ATP2A3-206ENST00000397043 FLG2Q5D862 2391 aaPredicted RBP8.97□□□□□ -0.97
ATP2A3-206ENST00000397043 KRTAP16-1A8MUX0 517 aa8.96□□□□□ -0.98
ATP2A3-206ENST00000397043 Q8N1X5 172 aa8.95□□□□□ -0.98
ATP2A3-206ENST00000397043 A6NN06 94 aa8.93□□□□□ -0.98
ATP2A3-206ENST00000397043 C9orf92A6NGG3 77 aa8.91□□□□□ -0.98
ATP2A3-206ENST00000397043 FAT2Q9NYQ8 4349 aa8.91□□□□□ -0.98
ATP2A3-206ENST00000397043 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
ATP2A3-206ENST00000397043 PKD1P98161 4303 aa8.9□□□□□ -0.98
ATP2A3-206ENST00000397043 PKHD1P08F94 4074 aa8.9□□□□□ -0.98
ATP2A3-206ENST00000397043 DMBT1Q9UGM3 2413 aaPredicted RBP8.84□□□□□ -0.99
ATP2A3-206ENST00000397043 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
ATP2A3-206ENST00000397043 UQCR11O14957 56 aa8.8□□□□□ -1
ATP2A3-206ENST00000397043 FAT1Q14517 4588 aa8.8□□□□□ -1
ATP2A3-206ENST00000397043 H3BS24 57 aa8.75□□□□□ -1.01
ATP2A3-206ENST00000397043 SPATA8Q6RVD6 105 aa8.7□□□□□ -1.02
ATP2A3-206ENST00000397043 DYNC1H1Q14204 4646 aaKnown RBP8.68□□□□□ -1.02
ATP2A3-206ENST00000397043 SACSQ9NZJ4 4579 aa8.65□□□□□ -1.02
ATP2A3-206ENST00000397043 RPS29P62273 56 aaKnown RBP8.58□□□□□ -1.04
ATP2A3-206ENST00000397043 CRIPTQ9P021 101 aa8.58□□□□□ -1.04
ATP2A3-206ENST00000397043 CSAG1Q6PB30 78 aa8.57□□□□□ -1.04
ATP2A3-206ENST00000397043 A8MUU9 505 aa8.55□□□□□ -1.04
ATP2A3-206ENST00000397043 LINC01554Q52M75 96 aa8.55□□□□□ -1.04
ATP2A3-206ENST00000397043 C20orf166-AS1Q96NR2 134 aa8.55□□□□□ -1.04
ATP2A3-206ENST00000397043 KRTAP3-1Q9BYR8 98 aa8.52□□□□□ -1.05
ATP2A3-206ENST00000397043 A0A1B0GU33 70 aa8.49□□□□□ -1.05
ATP2A3-206ENST00000397043 APOBP04114 4563 aaKnown RBP8.48□□□□□ -1.05
ATP2A3-206ENST00000397043 A0A1B0GVY2 172 aa8.47□□□□□ -1.05
ATP2A3-206ENST00000397043 H0YAA0 97 aa8.46□□□□□ -1.05
ATP2A3-206ENST00000397043 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
ATP2A3-206ENST00000397043 LRP1Q07954 4544 aaKnown RBP8.45□□□□□ -1.06
ATP2A3-206ENST00000397043 MYCBP2O75592 4640 aa8.43□□□□□ -1.06
ATP2A3-206ENST00000397043 KMT2CQ8NEZ4 4911 aaKnown RBP8.42□□□□□ -1.06
ATP2A3-206ENST00000397043 COX6B2Q6YFQ2 88 aa8.39□□□□□ -1.07
ATP2A3-206ENST00000397043 H1FX-AS1Q4G0G2 97 aa8.38□□□□□ -1.07
ATP2A3-206ENST00000397043 PKHD1L1Q86WI1 4243 aa8.33□□□□□ -1.08
ATP2A3-206ENST00000397043 Q5VSD8 79 aa8.32□□□□□ -1.08
ATP2A3-206ENST00000397043 RYR2Q92736 4967 aa8.31□□□□□ -1.08
ATP2A3-206ENST00000397043 A0A0D9SG42 100 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms