RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.14
TRIM40-207ENST00000396581 ZNF706Q9Y5V0 76 aaPredicted RBP7.95□□□□□ -1.14
TRIM40-207ENST00000396581 DNAH2Q9P225 4427 aa7.94□□□□□ -1.14
TRIM40-207ENST00000396581 ATP11AUNQ6ZP68 121 aa7.94□□□□□ -1.14
TRIM40-207ENST00000396581 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
TRIM40-207ENST00000396581 IGHV6-1A0A0B4J1U7 121 aa7.93□□□□□ -1.14
TRIM40-207ENST00000396581 HRES1P13985 223 aa7.91□□□□□ -1.14
TRIM40-207ENST00000396581 A6NED7 52 aa7.91□□□□□ -1.14
TRIM40-207ENST00000396581 CDC42SE1Q9NRR8 79 aa7.91□□□□□ -1.14
TRIM40-207ENST00000396581 IGLV5-52A0A0A0MRZ9 124 aa7.9□□□□□ -1.15
TRIM40-207ENST00000396581 A0A087X002 238 aa7.89□□□□□ -1.15
TRIM40-207ENST00000396581 NDUFS5O43920 106 aa7.89□□□□□ -1.15
TRIM40-207ENST00000396581 CDK2AP2O75956 126 aa7.89□□□□□ -1.15
TRIM40-207ENST00000396581 NOTCH2NLQ7Z3S9 236 aa7.89□□□□□ -1.15
TRIM40-207ENST00000396581 RTL8CO15255 209 aa7.88□□□□□ -1.15
TRIM40-207ENST00000396581 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
TRIM40-207ENST00000396581 HECTD4Q9Y4D8 3996 aa7.88□□□□□ -1.15
TRIM40-207ENST00000396581 DNAH6Q9C0G6 4158 aa7.88□□□□□ -1.15
TRIM40-207ENST00000396581 PSORS1C2Q9UIG4 136 aa7.88□□□□□ -1.15
TRIM40-207ENST00000396581 SPAG11AQ6PDA7 123 aa7.87□□□□□ -1.15
TRIM40-207ENST00000396581 KTN1-AS1Q86SY8 53 aa7.87□□□□□ -1.15
TRIM40-207ENST00000396581 ZNF861PO60384 105 aa7.87□□□□□ -1.15
TRIM40-207ENST00000396581 A6NN06 94 aa7.86□□□□□ -1.15
TRIM40-207ENST00000396581 ALMS1Q8TCU4 4167 aa7.86□□□□□ -1.15
TRIM40-207ENST00000396581 DNAH17Q9UFH2 4485 aa7.84□□□□□ -1.16
TRIM40-207ENST00000396581 SPTSSBQ8NFR3 76 aa7.83□□□□□ -1.16
TRIM40-207ENST00000396581 Q5W150 140 aa7.82□□□□□ -1.16
TRIM40-207ENST00000396581 ANAPC11Q9NYG5 84 aa7.82□□□□□ -1.16
TRIM40-207ENST00000396581 SPINK7P58062 85 aa7.79□□□□□ -1.16
TRIM40-207ENST00000396581 HYDINQ4G0P3 5121 aa7.79□□□□□ -1.16
TRIM40-207ENST00000396581 KRTAP10-2P60368 255 aa7.79□□□□□ -1.16
TRIM40-207ENST00000396581 FRAS1Q86XX4 4008 aa7.78□□□□□ -1.16
TRIM40-207ENST00000396581 DNAH8Q96JB1 4490 aa7.78□□□□□ -1.16
TRIM40-207ENST00000396581 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
TRIM40-207ENST00000396581 ACYP2P14621 99 aa7.75□□□□□ -1.17
TRIM40-207ENST00000396581 PRR26Q8N8Z3 221 aa7.75□□□□□ -1.17
TRIM40-207ENST00000396581 IGLV7-43P04211 117 aa7.74□□□□□ -1.17
TRIM40-207ENST00000396581 FAT2Q9NYQ8 4349 aa7.74□□□□□ -1.17
TRIM40-207ENST00000396581 SPINK6Q6UWN8 80 aa7.74□□□□□ -1.17
TRIM40-207ENST00000396581 SSBP3-AS1Q7Z2R9 100 aa7.74□□□□□ -1.17
TRIM40-207ENST00000396581 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
TRIM40-207ENST00000396581 DNAH11Q96DT5 4516 aa7.72□□□□□ -1.17
TRIM40-207ENST00000396581 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.17
TRIM40-207ENST00000396581 SACSQ9NZJ4 4579 aa7.71□□□□□ -1.18
TRIM40-207ENST00000396581 Q6ZSA8 131 aa7.71□□□□□ -1.18
TRIM40-207ENST00000396581 C7orf65Q6ZTY9 151 aa7.71□□□□□ -1.18
TRIM40-207ENST00000396581 DNAH5Q8TE73 4624 aa7.7□□□□□ -1.18
TRIM40-207ENST00000396581 PKD1P98161 4303 aa7.69□□□□□ -1.18
TRIM40-207ENST00000396581 CIRBP-AS1Q8TBR5 109 aa7.69□□□□□ -1.18
TRIM40-207ENST00000396581 FAM229AH3BQW9 127 aa7.68□□□□□ -1.18
TRIM40-207ENST00000396581 KRTAP10-1P60331 282 aa7.68□□□□□ -1.18
TRIM40-207ENST00000396581 IGKV2-30P06310 120 aa7.66□□□□□ -1.18
TRIM40-207ENST00000396581 LINC00313P59037 77 aa7.66□□□□□ -1.18
TRIM40-207ENST00000396581 KRTAP16-1A8MUX0 517 aa7.61□□□□□ -1.19
TRIM40-207ENST00000396581 KMT2CQ8NEZ4 4911 aaKnown RBP7.59□□□□□ -1.19
TRIM40-207ENST00000396581 A0A1B0GVY2 172 aa7.58□□□□□ -1.2
TRIM40-207ENST00000396581 KRTAP13-2Q52LG2 175 aa7.58□□□□□ -1.2
TRIM40-207ENST00000396581 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
TRIM40-207ENST00000396581 PKHD1P08F94 4074 aa7.58□□□□□ -1.2
TRIM40-207ENST00000396581 A0A1B0GU69 56 aa7.58□□□□□ -1.2
TRIM40-207ENST00000396581 LRP1BQ9NZR2 4599 aa7.56□□□□□ -1.2
TRIM40-207ENST00000396581 RYR2Q92736 4967 aa7.54□□□□□ -1.2
TRIM40-207ENST00000396581 RETNLBQ9BQ08 111 aa7.53□□□□□ -1.2
TRIM40-207ENST00000396581 PLA2G1BP04054 148 aaKnown RBP7.52□□□□□ -1.21
TRIM40-207ENST00000396581 UQCR11O14957 56 aa7.48□□□□□ -1.21
TRIM40-207ENST00000396581 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
TRIM40-207ENST00000396581 VPS13BQ7Z7G8 4022 aa7.48□□□□□ -1.21
TRIM40-207ENST00000396581 IGKV2D-30A0A075B6S6 120 aa7.48□□□□□ -1.21
TRIM40-207ENST00000396581 MIR22HGQ0VDD5 57 aa7.47□□□□□ -1.21
TRIM40-207ENST00000396581 DYNC1H1Q14204 4646 aaKnown RBP7.45□□□□□ -1.22
TRIM40-207ENST00000396581 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
TRIM40-207ENST00000396581 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
TRIM40-207ENST00000396581 SPINK1P00995 79 aa7.38□□□□□ -1.23
TRIM40-207ENST00000396581 SMR3BP02814 79 aaPredicted RBP7.38□□□□□ -1.23
TRIM40-207ENST00000396581 RYR3Q15413 4870 aa7.36□□□□□ -1.23
TRIM40-207ENST00000396581 APOBP04114 4563 aaKnown RBP7.36□□□□□ -1.23
TRIM40-207ENST00000396581 KRTAP10-4P60372 401 aaPredicted RBP7.35□□□□□ -1.23
TRIM40-207ENST00000396581 C4orf48Q5BLP8 95 aa7.34□□□□□ -1.23
TRIM40-207ENST00000396581 RPS29P62273 56 aaKnown RBP7.33□□□□□ -1.24
TRIM40-207ENST00000396581 TYMSOSQ8TAI1 123 aa7.33□□□□□ -1.24
TRIM40-207ENST00000396581 FAT1Q14517 4588 aa7.32□□□□□ -1.24
TRIM40-207ENST00000396581 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
TRIM40-207ENST00000396581 Q8N1X5 172 aa7.28□□□□□ -1.24
TRIM40-207ENST00000396581 LINC00304Q8N9R0 145 aa7.23□□□□□ -1.25
TRIM40-207ENST00000396581 C20orf166-AS1Q96NR2 134 aa7.22□□□□□ -1.25
TRIM40-207ENST00000396581 A8MUU9 505 aa7.21□□□□□ -1.25
TRIM40-207ENST00000396581 H0YAA0 97 aa7.2□□□□□ -1.26
TRIM40-207ENST00000396581 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
TRIM40-207ENST00000396581 HSPG2P98160 4391 aa7.19□□□□□ -1.26
TRIM40-207ENST00000396581 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
TRIM40-207ENST00000396581 Q5VSD8 79 aa7.16□□□□□ -1.26
TRIM40-207ENST00000396581 RYR1P21817 5038 aa7.14□□□□□ -1.27
TRIM40-207ENST00000396581 A0A1B0GU33 70 aa7.13□□□□□ -1.27
TRIM40-207ENST00000396581 KRTAP17-1Q9BYP8 105 aa7.12□□□□□ -1.27
TRIM40-207ENST00000396581 KIAA1109Q2LD37 5005 aa7.12□□□□□ -1.27
TRIM40-207ENST00000396581 H1FX-AS1Q4G0G2 97 aa7.12□□□□□ -1.27
TRIM40-207ENST00000396581 EPPK1P58107 5090 aaKnown RBP7.1□□□□□ -1.27
TRIM40-207ENST00000396581 PKHD1L1Q86WI1 4243 aa7.09□□□□□ -1.28
TRIM40-207ENST00000396581 C9orf92A6NGG3 77 aa7.08□□□□□ -1.28
TRIM40-207ENST00000396581 FLG2Q5D862 2391 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms