RNA–Protein interactions for RNA: ENST00000396148.1

CDKN2C-203, Transcript of cyclin dependent kinase inhibitor 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2C, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2C-203ENST00000396148 SVIPQ8NHG7 77 aa12.25□□□□□ -0.45
CDKN2C-203ENST00000396148 A0A1B0GVX0 72 aa12.24□□□□□ -0.45
CDKN2C-203ENST00000396148 ATP5EP56381 51 aaPredicted RBP12.24□□□□□ -0.45
CDKN2C-203ENST00000396148 FAT1Q14517 4588 aa12.23□□□□□ -0.45
CDKN2C-203ENST00000396148 IGHV6-1A0A0B4J1U7 121 aa12.22□□□□□ -0.45
CDKN2C-203ENST00000396148 Q5XG85 94 aa12.22□□□□□ -0.45
CDKN2C-203ENST00000396148 ZCCHC13Q8WW36 166 aaKnown RBP12.22□□□□□ -0.45
CDKN2C-203ENST00000396148 hDV103S1A0JD37 113 aa12.2□□□□□ -0.46
CDKN2C-203ENST00000396148 C8orf17Q9NRJ1 99 aa12.2□□□□□ -0.46
CDKN2C-203ENST00000396148 C5orf47Q569G3 176 aa12.2□□□□□ -0.46
CDKN2C-203ENST00000396148 PRR26Q8N8Z3 221 aa12.19□□□□□ -0.46
CDKN2C-203ENST00000396148 C4orf48Q5BLP8 95 aa12.17□□□□□ -0.46
CDKN2C-203ENST00000396148 LIMD2Q9BT23 127 aa12.15□□□□□ -0.46
CDKN2C-203ENST00000396148 C1orf195Q5TG92 126 aa12.14□□□□□ -0.47
CDKN2C-203ENST00000396148 NOTCH2NLQ7Z3S9 236 aa12.13□□□□□ -0.47
CDKN2C-203ENST00000396148 SPINK1P00995 79 aa12.12□□□□□ -0.47
CDKN2C-203ENST00000396148 LINC00304Q8N9R0 145 aa12.09□□□□□ -0.47
CDKN2C-203ENST00000396148 FAM229AH3BQW9 127 aa12.09□□□□□ -0.47
CDKN2C-203ENST00000396148 MRPL34Q9BQ48 92 aaKnown RBP12.06□□□□□ -0.48
CDKN2C-203ENST00000396148 MP68P56378 58 aa12.05□□□□□ -0.48
CDKN2C-203ENST00000396148 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
CDKN2C-203ENST00000396148 C8orf87E5RJ46 101 aa12.03□□□□□ -0.48
CDKN2C-203ENST00000396148 SMIM26A0A096LP01 95 aa12.02□□□□□ -0.48
CDKN2C-203ENST00000396148 RPS29P62273 56 aaKnown RBP12.02□□□□□ -0.48
CDKN2C-203ENST00000396148 H0Y9P7 68 aa12.01□□□□□ -0.49
CDKN2C-203ENST00000396148 TP53AIP1Q9HCN2 124 aa12.01□□□□□ -0.49
CDKN2C-203ENST00000396148 HSPG2P98160 4391 aa12.01□□□□□ -0.49
CDKN2C-203ENST00000396148 NDUFS5O43920 106 aa12.01□□□□□ -0.49
CDKN2C-203ENST00000396148 C4orf26Q17RF5 130 aa12.01□□□□□ -0.49
CDKN2C-203ENST00000396148 Q5VSD8 79 aa12□□□□□ -0.49
CDKN2C-203ENST00000396148 LINC00208Q96KT6 92 aa12□□□□□ -0.49
CDKN2C-203ENST00000396148 TRAV22A0A0B4J277 110 aa11.99□□□□□ -0.49
CDKN2C-203ENST00000396148 FP248Q71RG6 208 aaPredicted RBP11.99□□□□□ -0.49
CDKN2C-203ENST00000396148 H3BPC8 53 aa11.99□□□□□ -0.49
CDKN2C-203ENST00000396148 LINC00313P59037 77 aa11.99□□□□□ -0.49
CDKN2C-203ENST00000396148 PKHD1L1Q86WI1 4243 aa11.96□□□□□ -0.5
CDKN2C-203ENST00000396148 RYR1P21817 5038 aa11.93□□□□□ -0.5
CDKN2C-203ENST00000396148 CYP4F30PQ9H0H9 118 aa11.93□□□□□ -0.5
CDKN2C-203ENST00000396148 C1orf64Q8NEQ6 169 aa11.9□□□□□ -0.51
CDKN2C-203ENST00000396148 KRTAP17-1Q9BYP8 105 aa11.88□□□□□ -0.51
CDKN2C-203ENST00000396148 KRTAP16-1A8MUX0 517 aa11.85□□□□□ -0.51
CDKN2C-203ENST00000396148 PRR4Q16378 134 aa11.85□□□□□ -0.51
CDKN2C-203ENST00000396148 Q8N9P0 234 aaPredicted RBP11.85□□□□□ -0.51
CDKN2C-203ENST00000396148 SPANXA2-OT1Q8N9U9 137 aa11.85□□□□□ -0.51
CDKN2C-203ENST00000396148 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
CDKN2C-203ENST00000396148 EPPK1P58107 5090 aaKnown RBP11.81□□□□□ -0.52
CDKN2C-203ENST00000396148 Q5W150 140 aa11.8□□□□□ -0.52
CDKN2C-203ENST00000396148 KRTAP10-8P60410 259 aa11.79□□□□□ -0.52
CDKN2C-203ENST00000396148 LRP1Q07954 4544 aaKnown RBP11.78□□□□□ -0.52
CDKN2C-203ENST00000396148 Q8N1X5 172 aa11.78□□□□□ -0.52
CDKN2C-203ENST00000396148 KRTAP13-3Q3SY46 172 aa11.77□□□□□ -0.52
CDKN2C-203ENST00000396148 MPLKIPQ8TAP9 179 aa11.75□□□□□ -0.53
CDKN2C-203ENST00000396148 TNXBP22105 4242 aa11.74□□□□□ -0.53
CDKN2C-203ENST00000396148 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
CDKN2C-203ENST00000396148 FLG2Q5D862 2391 aaPredicted RBP11.73□□□□□ -0.53
CDKN2C-203ENST00000396148 IGLV7-46A0A075B6I9 117 aa11.7□□□□□ -0.54
CDKN2C-203ENST00000396148 PCOTHQ58A44 107 aa11.69□□□□□ -0.54
CDKN2C-203ENST00000396148 LOC101927531A0A1B0GV80 90 aa11.69□□□□□ -0.54
CDKN2C-203ENST00000396148 Q1T7F1 81 aa11.66□□□□□ -0.54
CDKN2C-203ENST00000396148 FAT3Q8TDW7 4589 aa11.65□□□□□ -0.54
CDKN2C-203ENST00000396148 C9orf92A6NGG3 77 aa11.64□□□□□ -0.55
CDKN2C-203ENST00000396148 MT1HL1P0DM35 61 aa11.58□□□□□ -0.56
CDKN2C-203ENST00000396148 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
CDKN2C-203ENST00000396148 COA5Q86WW8 74 aa11.55□□□□□ -0.56
CDKN2C-203ENST00000396148 MYCBP2O75592 4640 aa11.55□□□□□ -0.56
CDKN2C-203ENST00000396148 C20orf166-AS1Q96NR2 134 aa11.54□□□□□ -0.56
CDKN2C-203ENST00000396148 DMBT1Q9UGM3 2413 aaPredicted RBP11.53□□□□□ -0.56
CDKN2C-203ENST00000396148 A8MUU9 505 aa11.53□□□□□ -0.56
CDKN2C-203ENST00000396148 V9GYY9 64 aa11.48□□□□□ -0.57
CDKN2C-203ENST00000396148 IGKV2D-30A0A075B6S6 120 aa11.48□□□□□ -0.57
CDKN2C-203ENST00000396148 KRTAP4-5Q9BYR2 181 aa11.48□□□□□ -0.57
CDKN2C-203ENST00000396148 PRO0628Q9UI54 55 aa11.47□□□□□ -0.57
CDKN2C-203ENST00000396148 HRES1P13985 223 aa11.45□□□□□ -0.58
CDKN2C-203ENST00000396148 PSPHP1O15172 72 aa11.45□□□□□ -0.58
CDKN2C-203ENST00000396148 BRK1Q8WUW1 75 aa11.42□□□□□ -0.58
CDKN2C-203ENST00000396148 A8MUN3 132 aa11.4□□□□□ -0.58
CDKN2C-203ENST00000396148 Q75L30 129 aa11.4□□□□□ -0.58
CDKN2C-203ENST00000396148 C7orf65Q6ZTY9 151 aa11.37□□□□□ -0.59
CDKN2C-203ENST00000396148 Q5VV11 94 aa11.36□□□□□ -0.59
CDKN2C-203ENST00000396148 DMAC1Q96GE9 116 aa11.31□□□□□ -0.6
CDKN2C-203ENST00000396148 PRR15LQ9BU68 103 aa11.29□□□□□ -0.6
CDKN2C-203ENST00000396148 ACYP2P14621 99 aa11.28□□□□□ -0.6
CDKN2C-203ENST00000396148 XP32Q5T750 250 aa11.27□□□□□ -0.61
CDKN2C-203ENST00000396148 LINC01558Q9Y6Z2 57 aa11.26□□□□□ -0.61
CDKN2C-203ENST00000396148 RPL37P61927 97 aaKnown RBP11.24□□□□□ -0.61
CDKN2C-203ENST00000396148 ATP11AUNQ6ZP68 121 aa11.23□□□□□ -0.61
CDKN2C-203ENST00000396148 SPINK7P58062 85 aa11.22□□□□□ -0.61
CDKN2C-203ENST00000396148 BIRC6Q9NR09 4857 aa11.2□□□□□ -0.62
CDKN2C-203ENST00000396148 ABCA13Q86UQ4 5058 aa11.2□□□□□ -0.62
CDKN2C-203ENST00000396148 CHKB-CPT1BH3BT56 60 aa11.19□□□□□ -0.62
CDKN2C-203ENST00000396148 TPRXLQ17RH7 258 aa11.14□□□□□ -0.63
CDKN2C-203ENST00000396148 HERC2O95714 4834 aa11.14□□□□□ -0.63
CDKN2C-203ENST00000396148 J3QL48 77 aa11.11□□□□□ -0.63
CDKN2C-203ENST00000396148 A8MU10 97 aa11.1□□□□□ -0.63
CDKN2C-203ENST00000396148 A6NED7 52 aa11.04□□□□□ -0.64
CDKN2C-203ENST00000396148 LCA10Q71F78 164 aa11.02□□□□□ -0.64
CDKN2C-203ENST00000396148 KRTAP3-1Q9BYR8 98 aa11.01□□□□□ -0.65
CDKN2C-203ENST00000396148 LPAP08519 4548 aa10.97□□□□□ -0.65
CDKN2C-203ENST00000396148 COX6B2Q6YFQ2 88 aa10.96□□□□□ -0.65
CDKN2C-203ENST00000396148 LRP2P98164 4655 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms