RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 SCGB1C2P0DMR2 95 aa8.91□□□□□ -0.98
CXCL12-204ENST00000395793 SSPOA2VEC9 5147 aa8.91□□□□□ -0.98
CXCL12-204ENST00000395793 DSCR8Q96T75 97 aa8.9□□□□□ -0.98
CXCL12-204ENST00000395793 TMA7Q9Y2S6 64 aaKnown RBP8.9□□□□□ -0.98
CXCL12-204ENST00000395793 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.89□□□□□ -0.99
CXCL12-204ENST00000395793 LCE2BO14633 110 aa8.88□□□□□ -0.99
CXCL12-204ENST00000395793 BAALC-AS2P0C853 105 aa8.88□□□□□ -0.99
CXCL12-204ENST00000395793 ZCCHC13Q8WW36 166 aaKnown RBP8.87□□□□□ -0.99
CXCL12-204ENST00000395793 KRTAP9-3Q9BYQ3 159 aa8.87□□□□□ -0.99
CXCL12-204ENST00000395793 Q6ZQT0 140 aa8.86□□□□□ -0.99
CXCL12-204ENST00000395793 C9JAW5 83 aa8.85□□□□□ -0.99
CXCL12-204ENST00000395793 J3KT08 172 aa8.84□□□□□ -0.99
CXCL12-204ENST00000395793 SPINK7P58062 85 aa8.82□□□□□ -1
CXCL12-204ENST00000395793 KRTAP10-10P60014 251 aa8.82□□□□□ -1
CXCL12-204ENST00000395793 NAA38Q9BRA0 125 aaKnown RBP8.82□□□□□ -1
CXCL12-204ENST00000395793 KRTAP9-7A8MTY7 169 aa8.81□□□□□ -1
CXCL12-204ENST00000395793 Q8N9P0 234 aaPredicted RBP8.81□□□□□ -1
CXCL12-204ENST00000395793 C21orf62-AS1Q17RA5 79 aa8.79□□□□□ -1
CXCL12-204ENST00000395793 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
CXCL12-204ENST00000395793 C8orf17Q9NRJ1 99 aa8.78□□□□□ -1
CXCL12-204ENST00000395793 LOC110117498A0A087WWA1 95 aa8.76□□□□□ -1.01
CXCL12-204ENST00000395793 IGKV3D-7A0A0C4DH55 119 aa8.76□□□□□ -1.01
CXCL12-204ENST00000395793 NDUFB1O75438 58 aa8.76□□□□□ -1.01
CXCL12-204ENST00000395793 A8MWP4 228 aa8.75□□□□□ -1.01
CXCL12-204ENST00000395793 ATXN8Q156A1 80 aa8.75□□□□□ -1.01
CXCL12-204ENST00000395793 MTURNQ8N3F0 131 aa8.75□□□□□ -1.01
CXCL12-204ENST00000395793 JMJD7-PLA2G4BH0Y9G9 81 aa8.74□□□□□ -1.01
CXCL12-204ENST00000395793 WFDC13Q8IUB5 93 aa8.72□□□□□ -1.01
CXCL12-204ENST00000395793 C14orf132Q9NPU4 83 aa8.72□□□□□ -1.01
CXCL12-204ENST00000395793 FCGBPQ9Y6R7 5405 aaPredicted RBP8.72□□□□□ -1.01
CXCL12-204ENST00000395793 A0A1B0GW54 56 aa8.7□□□□□ -1.02
CXCL12-204ENST00000395793 M0R143 59 aa8.7□□□□□ -1.02
CXCL12-204ENST00000395793 Q6ZVQ6 151 aa8.68□□□□□ -1.02
CXCL12-204ENST00000395793 PRR15Q8IV56 129 aa8.67□□□□□ -1.02
CXCL12-204ENST00000395793 PDE6GP18545 87 aa8.66□□□□□ -1.02
CXCL12-204ENST00000395793 LYRM7Q5U5X0 104 aa8.66□□□□□ -1.02
CXCL12-204ENST00000395793 MMP24-AS1A0A0U1RRL7 71 aa8.65□□□□□ -1.02
CXCL12-204ENST00000395793 NREPQ16612 68 aa8.61□□□□□ -1.03
CXCL12-204ENST00000395793 TMEM254Q8TBM7 123 aa8.61□□□□□ -1.03
CXCL12-204ENST00000395793 MRPL34Q9BQ48 92 aaKnown RBP8.61□□□□□ -1.03
CXCL12-204ENST00000395793 K7EQZ3 153 aa8.58□□□□□ -1.04
CXCL12-204ENST00000395793 KRTAP19-6Q3LI70 58 aa8.57□□□□□ -1.04
CXCL12-204ENST00000395793 SMIM6P0DI80 62 aa8.56□□□□□ -1.04
CXCL12-204ENST00000395793 hDV103S1A0JD37 113 aa8.54□□□□□ -1.04
CXCL12-204ENST00000395793 BATFQ16520 125 aa8.54□□□□□ -1.04
CXCL12-204ENST00000395793 NDUFS5O43920 106 aa8.51□□□□□ -1.05
CXCL12-204ENST00000395793 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
CXCL12-204ENST00000395793 H3BT86 120 aa8.5□□□□□ -1.05
CXCL12-204ENST00000395793 Q5W150 140 aa8.5□□□□□ -1.05
CXCL12-204ENST00000395793 IGKV2D-30A0A075B6S6 120 aa8.47□□□□□ -1.05
CXCL12-204ENST00000395793 C9orf118A6NHY6 69 aa8.47□□□□□ -1.05
CXCL12-204ENST00000395793 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
CXCL12-204ENST00000395793 TSTD3H0UI37 97 aa8.46□□□□□ -1.06
CXCL12-204ENST00000395793 TAX1BP3O14907 124 aa8.46□□□□□ -1.06
CXCL12-204ENST00000395793 A0A1W2PPM0 123 aa8.45□□□□□ -1.06
CXCL12-204ENST00000395793 BPY2O14599 106 aa8.44□□□□□ -1.06
CXCL12-204ENST00000395793 Q8N9L7 120 aa8.44□□□□□ -1.06
CXCL12-204ENST00000395793 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
CXCL12-204ENST00000395793 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
CXCL12-204ENST00000395793 MACF1Q9UPN3 7388 aaKnown RBP8.41□□□□□ -1.06
CXCL12-204ENST00000395793 HCG22E2RYF7 251 aa8.38□□□□□ -1.07
CXCL12-204ENST00000395793 CASC2Q6XLA1 102 aa8.38□□□□□ -1.07
CXCL12-204ENST00000395793 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
CXCL12-204ENST00000395793 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
CXCL12-204ENST00000395793 SYNE2Q8WXH0 6885 aaKnown RBP8.32□□□□□ -1.08
CXCL12-204ENST00000395793 LOC105371267A0A1B0GV96 52 aa8.31□□□□□ -1.08
CXCL12-204ENST00000395793 SPCS1Q9Y6A9 102 aa8.31□□□□□ -1.08
CXCL12-204ENST00000395793 CXCL6P80162 114 aa8.28□□□□□ -1.08
CXCL12-204ENST00000395793 KRTAP3-1Q9BYR8 98 aa8.28□□□□□ -1.08
CXCL12-204ENST00000395793 C5orf47Q569G3 176 aa8.24□□□□□ -1.09
CXCL12-204ENST00000395793 PRO0461Q9UI25 63 aa8.24□□□□□ -1.09
CXCL12-204ENST00000395793 KRTAP6-3Q3LI67 103 aa8.23□□□□□ -1.09
CXCL12-204ENST00000395793 UBL5Q9BZL1 73 aa8.2□□□□□ -1.1
CXCL12-204ENST00000395793 MT1BP07438 61 aa8.18□□□□□ -1.1
CXCL12-204ENST00000395793 S4R3F8 94 aa8.17□□□□□ -1.1
CXCL12-204ENST00000395793 FAM236AA0A1B0GUQ0 79 aa8.15□□□□□ -1.1
CXCL12-204ENST00000395793 FAM236BA0A1B0GV22 79 aa8.15□□□□□ -1.1
CXCL12-204ENST00000395793 LCA10Q71F78 164 aa8.15□□□□□ -1.1
CXCL12-204ENST00000395793 C1orf64Q8NEQ6 169 aa8.15□□□□□ -1.1
CXCL12-204ENST00000395793 K7EP34 96 aa8.14□□□□□ -1.11
CXCL12-204ENST00000395793 COL5A1-AS1Q5SY13 56 aa8.11□□□□□ -1.11
CXCL12-204ENST00000395793 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
CXCL12-204ENST00000395793 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
CXCL12-204ENST00000395793 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
CXCL12-204ENST00000395793 KRTAP19-8Q3LI54 63 aa8.1□□□□□ -1.11
CXCL12-204ENST00000395793 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
CXCL12-204ENST00000395793 Q5VV11 94 aa8.07□□□□□ -1.12
CXCL12-204ENST00000395793 A6NN06 94 aa8.06□□□□□ -1.12
CXCL12-204ENST00000395793 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
CXCL12-204ENST00000395793 KLKP1Q107X0 134 aa8.01□□□□□ -1.13
CXCL12-204ENST00000395793 A0A087WVE0 104 aa8□□□□□ -1.13
CXCL12-204ENST00000395793 KRTAP10-5P60370 271 aa7.99□□□□□ -1.13
CXCL12-204ENST00000395793 CYP4F30PQ9H0H9 118 aa7.99□□□□□ -1.13
CXCL12-204ENST00000395793 ETDBQ3ZM63 59 aa7.98□□□□□ -1.13
CXCL12-204ENST00000395793 GTF2H5Q6ZYL4 71 aa7.95□□□□□ -1.14
CXCL12-204ENST00000395793 F8W1H4 67 aa7.93□□□□□ -1.14
CXCL12-204ENST00000395793 TRAV22A0A0B4J277 110 aa7.9□□□□□ -1.14
CXCL12-204ENST00000395793 LOC101927531A0A1B0GV80 90 aa7.87□□□□□ -1.15
CXCL12-204ENST00000395793 NEBP20929 6669 aa7.87□□□□□ -1.15
CXCL12-204ENST00000395793 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms