RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 A0A0U1RQV1 116 aa9.9□□□□□ -0.83
SLC6A4-202ENST00000394821 CASC2Q6XLA1 102 aa9.89□□□□□ -0.83
SLC6A4-202ENST00000394821 SSBP3-AS1Q7Z2R9 100 aa9.89□□□□□ -0.83
SLC6A4-202ENST00000394821 MMP24-AS1A0A0U1RRL7 71 aa9.88□□□□□ -0.83
SLC6A4-202ENST00000394821 NDUFB1O75438 58 aa9.86□□□□□ -0.83
SLC6A4-202ENST00000394821 CD164Q04900 197 aa9.85□□□□□ -0.83
SLC6A4-202ENST00000394821 TYMSOSQ8TAI1 123 aa9.83□□□□□ -0.84
SLC6A4-202ENST00000394821 NDUFC1O43677 76 aa9.81□□□□□ -0.84
SLC6A4-202ENST00000394821 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
SLC6A4-202ENST00000394821 Q8N1X5 172 aa9.81□□□□□ -0.84
SLC6A4-202ENST00000394821 A0A1B0GVX0 72 aa9.81□□□□□ -0.84
SLC6A4-202ENST00000394821 IGHV6-1A0A0B4J1U7 121 aa9.8□□□□□ -0.84
SLC6A4-202ENST00000394821 hDV103S1A0JD37 113 aa9.8□□□□□ -0.84
SLC6A4-202ENST00000394821 FAM236DA0A1B0GTK5 79 aa9.8□□□□□ -0.84
SLC6A4-202ENST00000394821 FAM236CP0DP71 79 aa9.8□□□□□ -0.84
SLC6A4-202ENST00000394821 C8orf17Q9NRJ1 99 aa9.8□□□□□ -0.84
SLC6A4-202ENST00000394821 NOTCH2NLQ7Z3S9 236 aa9.79□□□□□ -0.84
SLC6A4-202ENST00000394821 ZCCHC13Q8WW36 166 aaKnown RBP9.79□□□□□ -0.84
SLC6A4-202ENST00000394821 KRTAP4-5Q9BYR2 181 aa9.79□□□□□ -0.84
SLC6A4-202ENST00000394821 MYCBP2O75592 4640 aa9.78□□□□□ -0.84
SLC6A4-202ENST00000394821 FAT3Q8TDW7 4589 aa9.78□□□□□ -0.84
SLC6A4-202ENST00000394821 TNXBP22105 4242 aa9.77□□□□□ -0.85
SLC6A4-202ENST00000394821 BIRC6Q9NR09 4857 aa9.76□□□□□ -0.85
SLC6A4-202ENST00000394821 FLG2Q5D862 2391 aaPredicted RBP9.75□□□□□ -0.85
SLC6A4-202ENST00000394821 RPS28P62857 69 aaKnown RBP9.75□□□□□ -0.85
SLC6A4-202ENST00000394821 OXTP01178 125 aa9.74□□□□□ -0.85
SLC6A4-202ENST00000394821 Q5XG85 94 aa9.72□□□□□ -0.85
SLC6A4-202ENST00000394821 H0Y9P7 68 aa9.7□□□□□ -0.86
SLC6A4-202ENST00000394821 MP68P56378 58 aa9.7□□□□□ -0.86
SLC6A4-202ENST00000394821 C1orf195Q5TG92 126 aa9.7□□□□□ -0.86
SLC6A4-202ENST00000394821 LINC00304Q8N9R0 145 aa9.7□□□□□ -0.86
SLC6A4-202ENST00000394821 LINC00208Q96KT6 92 aa9.68□□□□□ -0.86
SLC6A4-202ENST00000394821 C4orf48Q5BLP8 95 aa9.67□□□□□ -0.86
SLC6A4-202ENST00000394821 MRPL34Q9BQ48 92 aaKnown RBP9.67□□□□□ -0.86
SLC6A4-202ENST00000394821 ABCA13Q86UQ4 5058 aa9.66□□□□□ -0.86
SLC6A4-202ENST00000394821 TRAV22A0A0B4J277 110 aa9.65□□□□□ -0.86
SLC6A4-202ENST00000394821 KRTAP10-8P60410 259 aa9.65□□□□□ -0.86
SLC6A4-202ENST00000394821 HERC2O95714 4834 aa9.64□□□□□ -0.87
SLC6A4-202ENST00000394821 SPINK1P00995 79 aa9.64□□□□□ -0.87
SLC6A4-202ENST00000394821 ATP5EP56381 51 aaPredicted RBP9.64□□□□□ -0.87
SLC6A4-202ENST00000394821 TP53AIP1Q9HCN2 124 aa9.64□□□□□ -0.87
SLC6A4-202ENST00000394821 SERP1Q9Y6X1 66 aa9.63□□□□□ -0.87
SLC6A4-202ENST00000394821 NDUFS5O43920 106 aa9.63□□□□□ -0.87
SLC6A4-202ENST00000394821 H3BPC8 53 aa9.62□□□□□ -0.87
SLC6A4-202ENST00000394821 C1orf64Q8NEQ6 169 aa9.61□□□□□ -0.87
SLC6A4-202ENST00000394821 LIMD2Q9BT23 127 aa9.61□□□□□ -0.87
SLC6A4-202ENST00000394821 MT1HL1P0DM35 61 aa9.59□□□□□ -0.87
SLC6A4-202ENST00000394821 C8orf87E5RJ46 101 aa9.58□□□□□ -0.88
SLC6A4-202ENST00000394821 SPAG11AQ6PDA7 123 aa9.58□□□□□ -0.88
SLC6A4-202ENST00000394821 LINC00313P59037 77 aa9.56□□□□□ -0.88
SLC6A4-202ENST00000394821 RETNLBQ9BQ08 111 aa9.56□□□□□ -0.88
SLC6A4-202ENST00000394821 PRR4Q16378 134 aa9.54□□□□□ -0.88
SLC6A4-202ENST00000394821 Q5W150 140 aa9.54□□□□□ -0.88
SLC6A4-202ENST00000394821 RPS29P62273 56 aaKnown RBP9.52□□□□□ -0.89
SLC6A4-202ENST00000394821 KRTAP13-3Q3SY46 172 aa9.52□□□□□ -0.89
SLC6A4-202ENST00000394821 DMBT1Q9UGM3 2413 aaPredicted RBP9.51□□□□□ -0.89
SLC6A4-202ENST00000394821 KRTAP16-1A8MUX0 517 aa9.51□□□□□ -0.89
SLC6A4-202ENST00000394821 Q8N9P0 234 aaPredicted RBP9.49□□□□□ -0.89
SLC6A4-202ENST00000394821 CYP4F30PQ9H0H9 118 aa9.49□□□□□ -0.89
SLC6A4-202ENST00000394821 SEC61GP60059 68 aa9.47□□□□□ -0.89
SLC6A4-202ENST00000394821 SPANXA2-OT1Q8N9U9 137 aa9.47□□□□□ -0.89
SLC6A4-202ENST00000394821 PCOTHQ58A44 107 aa9.46□□□□□ -0.89
SLC6A4-202ENST00000394821 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
SLC6A4-202ENST00000394821 SMIM26A0A096LP01 95 aa9.41□□□□□ -0.9
SLC6A4-202ENST00000394821 IGLV7-46A0A075B6I9 117 aa9.4□□□□□ -0.91
SLC6A4-202ENST00000394821 LOC101927531A0A1B0GV80 90 aa9.39□□□□□ -0.91
SLC6A4-202ENST00000394821 PCLOQ9Y6V0 5065 aa9.39□□□□□ -0.91
SLC6A4-202ENST00000394821 C4orf26Q17RF5 130 aa9.37□□□□□ -0.91
SLC6A4-202ENST00000394821 C9orf92A6NGG3 77 aa9.36□□□□□ -0.91
SLC6A4-202ENST00000394821 IGKV2-30P06310 120 aa9.29□□□□□ -0.92
SLC6A4-202ENST00000394821 MPLKIPQ8TAP9 179 aa9.29□□□□□ -0.92
SLC6A4-202ENST00000394821 J3QL48 77 aa9.27□□□□□ -0.92
SLC6A4-202ENST00000394821 V9GYY9 64 aa9.27□□□□□ -0.92
SLC6A4-202ENST00000394821 PRO0628Q9UI54 55 aa9.26□□□□□ -0.93
SLC6A4-202ENST00000394821 COA5Q86WW8 74 aa9.25□□□□□ -0.93
SLC6A4-202ENST00000394821 LPAP08519 4548 aa9.25□□□□□ -0.93
SLC6A4-202ENST00000394821 HRES1P13985 223 aa9.23□□□□□ -0.93
SLC6A4-202ENST00000394821 IGKV2D-30A0A075B6S6 120 aa9.2□□□□□ -0.94
SLC6A4-202ENST00000394821 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
SLC6A4-202ENST00000394821 Q1T7F1 81 aa9.19□□□□□ -0.94
SLC6A4-202ENST00000394821 A8MUU9 505 aa9.18□□□□□ -0.94
SLC6A4-202ENST00000394821 HERC1Q15751 4861 aa9.16□□□□□ -0.94
SLC6A4-202ENST00000394821 DMAC1Q96GE9 116 aa9.13□□□□□ -0.95
SLC6A4-202ENST00000394821 LRP2P98164 4655 aa9.12□□□□□ -0.95
SLC6A4-202ENST00000394821 XP32Q5T750 250 aa9.11□□□□□ -0.95
SLC6A4-202ENST00000394821 ACYP2P14621 99 aa9.08□□□□□ -0.96
SLC6A4-202ENST00000394821 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
SLC6A4-202ENST00000394821 PSPHP1O15172 72 aa9.07□□□□□ -0.96
SLC6A4-202ENST00000394821 Q75L30 129 aa9.05□□□□□ -0.96
SLC6A4-202ENST00000394821 A8MUN3 132 aa9.03□□□□□ -0.96
SLC6A4-202ENST00000394821 TPRXLQ17RH7 258 aa9.03□□□□□ -0.96
SLC6A4-202ENST00000394821 RPL37P61927 97 aaKnown RBP9□□□□□ -0.97
SLC6A4-202ENST00000394821 Q5VV11 94 aa8.97□□□□□ -0.97
SLC6A4-202ENST00000394821 SPINK7P58062 85 aa8.96□□□□□ -0.98
SLC6A4-202ENST00000394821 PRR15LQ9BU68 103 aa8.96□□□□□ -0.98
SLC6A4-202ENST00000394821 HMCN2Q8NDA2 5059 aa8.95□□□□□ -0.98
SLC6A4-202ENST00000394821 LINC01558Q9Y6Z2 57 aa8.95□□□□□ -0.98
SLC6A4-202ENST00000394821 CHKB-CPT1BH3BT56 60 aa8.95□□□□□ -0.98
SLC6A4-202ENST00000394821 ATP11AUNQ6ZP68 121 aa8.92□□□□□ -0.98
SLC6A4-202ENST00000394821 BRK1Q8WUW1 75 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms