RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 AKAP9Q99996 3911 aa11.27□□□□□ -0.61
CXXC4-201ENST00000394767 A6NED7 52 aa11.27□□□□□ -0.61
CXXC4-201ENST00000394767 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
CXXC4-201ENST00000394767 FP248Q71RG6 208 aaPredicted RBP11.24□□□□□ -0.61
CXXC4-201ENST00000394767 ZCCHC13Q8WW36 166 aaKnown RBP11.21□□□□□ -0.62
CXXC4-201ENST00000394767 SEC61BP60468 96 aaKnown RBP11.2□□□□□ -0.62
CXXC4-201ENST00000394767 OCR1Q9BZK8 76 aa11.17□□□□□ -0.62
CXXC4-201ENST00000394767 PSPHP1O15172 72 aa11.15□□□□□ -0.62
CXXC4-201ENST00000394767 KLKP1Q107X0 134 aa11.15□□□□□ -0.63
CXXC4-201ENST00000394767 A0A1B0GU69 56 aa11.14□□□□□ -0.63
CXXC4-201ENST00000394767 A0A1B0GVY2 172 aa11.13□□□□□ -0.63
CXXC4-201ENST00000394767 C4orf26Q17RF5 130 aa11.12□□□□□ -0.63
CXXC4-201ENST00000394767 RPS29P62273 56 aaKnown RBP11.1□□□□□ -0.63
CXXC4-201ENST00000394767 COA5Q86WW8 74 aa11.09□□□□□ -0.63
CXXC4-201ENST00000394767 SPINK7P58062 85 aa11.07□□□□□ -0.64
CXXC4-201ENST00000394767 M0R2T5 61 aa11.06□□□□□ -0.64
CXXC4-201ENST00000394767 ASB16-AS1Q495Z4 193 aa11.03□□□□□ -0.64
CXXC4-201ENST00000394767 Q8N9P0 234 aaPredicted RBP11.03□□□□□ -0.64
CXXC4-201ENST00000394767 KRTAP1-4P0C5Y4 121 aa11.02□□□□□ -0.65
CXXC4-201ENST00000394767 Q5W150 140 aa11.02□□□□□ -0.65
CXXC4-201ENST00000394767 HRES1P13985 223 aa11□□□□□ -0.65
CXXC4-201ENST00000394767 H7BZZ5 65 aa11□□□□□ -0.65
CXXC4-201ENST00000394767 NOTCH2NLQ7Z3S9 236 aa10.99□□□□□ -0.65
CXXC4-201ENST00000394767 CYP4F30PQ9H0H9 118 aa10.97□□□□□ -0.65
CXXC4-201ENST00000394767 Q5XG85 94 aa10.96□□□□□ -0.65
CXXC4-201ENST00000394767 COL7A1Q02388 2944 aa10.93□□□□□ -0.66
CXXC4-201ENST00000394767 SPANXA2-OT1Q8N9U9 137 aa10.93□□□□□ -0.66
CXXC4-201ENST00000394767 MEGF8Q7Z7M0 2845 aa10.91□□□□□ -0.66
CXXC4-201ENST00000394767 SRRM2Q9UQ35 2752 aaKnown RBP10.9□□□□□ -0.66
CXXC4-201ENST00000394767 PMAIP1Q13794 54 aa10.87□□□□□ -0.67
CXXC4-201ENST00000394767 A8MUN3 132 aa10.86□□□□□ -0.67
CXXC4-201ENST00000394767 KRTAP29-1A8MX34 341 aaPredicted RBP10.86□□□□□ -0.67
CXXC4-201ENST00000394767 HUWE1Q7Z6Z7 4374 aaKnown RBP10.85□□□□□ -0.67
CXXC4-201ENST00000394767 RPS28P62857 69 aaKnown RBP10.82□□□□□ -0.68
CXXC4-201ENST00000394767 CSAG1Q6PB30 78 aa10.78□□□□□ -0.68
CXXC4-201ENST00000394767 S4R3F8 94 aa10.76□□□□□ -0.69
CXXC4-201ENST00000394767 Q75L30 129 aa10.76□□□□□ -0.69
CXXC4-201ENST00000394767 LINC01554Q52M75 96 aa10.75□□□□□ -0.69
CXXC4-201ENST00000394767 RPL37P61927 97 aaKnown RBP10.72□□□□□ -0.69
CXXC4-201ENST00000394767 DNHD1Q96M86 4753 aa10.69□□□□□ -0.7
CXXC4-201ENST00000394767 UQCR11O14957 56 aa10.68□□□□□ -0.7
CXXC4-201ENST00000394767 DNAH9Q9NYC9 4486 aa10.64□□□□□ -0.71
CXXC4-201ENST00000394767 KRTAP10-8P60410 259 aa10.62□□□□□ -0.71
CXXC4-201ENST00000394767 CYSTM1Q9H1C7 97 aa10.59□□□□□ -0.71
CXXC4-201ENST00000394767 A0A0D9SG42 100 aa10.58□□□□□ -0.72
CXXC4-201ENST00000394767 A8MUU9 505 aa10.56□□□□□ -0.72
CXXC4-201ENST00000394767 XP32Q5T750 250 aa10.56□□□□□ -0.72
CXXC4-201ENST00000394767 C20orf166-AS1Q96NR2 134 aa10.55□□□□□ -0.72
CXXC4-201ENST00000394767 MIR22HGQ0VDD5 57 aa10.53□□□□□ -0.72
CXXC4-201ENST00000394767 TPRXLQ17RH7 258 aa10.51□□□□□ -0.73
CXXC4-201ENST00000394767 DMAC1Q96GE9 116 aa10.51□□□□□ -0.73
CXXC4-201ENST00000394767 SPINT4Q6UDR6 99 aa10.5□□□□□ -0.73
CXXC4-201ENST00000394767 H1FX-AS1Q4G0G2 97 aa10.46□□□□□ -0.73
CXXC4-201ENST00000394767 A0A1B0GU33 70 aa10.44□□□□□ -0.74
CXXC4-201ENST00000394767 KRTAP13-3Q3SY46 172 aa10.41□□□□□ -0.74
CXXC4-201ENST00000394767 R4GN34 69 aa10.4□□□□□ -0.74
CXXC4-201ENST00000394767 CAMK2N1Q7Z7J9 78 aa10.33□□□□□ -0.76
CXXC4-201ENST00000394767 LINC01558Q9Y6Z2 57 aa10.29□□□□□ -0.76
CXXC4-201ENST00000394767 Q1T7F1 81 aa10.28□□□□□ -0.76
CXXC4-201ENST00000394767 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
CXXC4-201ENST00000394767 ANK2Q01484 3957 aa10.27□□□□□ -0.76
CXXC4-201ENST00000394767 KRTAP16-1A8MUX0 517 aa10.27□□□□□ -0.77
CXXC4-201ENST00000394767 ALMS1Q8TCU4 4167 aa10.26□□□□□ -0.77
CXXC4-201ENST00000394767 PRO0628Q9UI54 55 aa10.26□□□□□ -0.77
CXXC4-201ENST00000394767 PLECQ15149 4684 aaKnown RBP10.25□□□□□ -0.77
CXXC4-201ENST00000394767 PRKDCP78527 4128 aaKnown RBP10.24□□□□□ -0.77
CXXC4-201ENST00000394767 M0QZ58 72 aa10.23□□□□□ -0.77
CXXC4-201ENST00000394767 KRTAP4-5Q9BYR2 181 aa10.23□□□□□ -0.77
CXXC4-201ENST00000394767 LCA10Q71F78 164 aa10.19□□□□□ -0.78
CXXC4-201ENST00000394767 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
CXXC4-201ENST00000394767 MT1HL1P0DM35 61 aa10.14□□□□□ -0.79
CXXC4-201ENST00000394767 KRTAP10-4P60372 401 aaPredicted RBP10.14□□□□□ -0.79
CXXC4-201ENST00000394767 CDC42SE1Q9NRR8 79 aa10.12□□□□□ -0.79
CXXC4-201ENST00000394767 CRIPTQ9P021 101 aa10.09□□□□□ -0.79
CXXC4-201ENST00000394767 STARD9Q9P2P6 4700 aa10.06□□□□□ -0.8
CXXC4-201ENST00000394767 DNAH1Q9P2D7 4330 aa10.04□□□□□ -0.8
CXXC4-201ENST00000394767 DNAH5Q8TE73 4624 aa10.03□□□□□ -0.8
CXXC4-201ENST00000394767 VPS13DQ5THJ4 4388 aa10.01□□□□□ -0.81
CXXC4-201ENST00000394767 Q5VV11 94 aa10.01□□□□□ -0.81
CXXC4-201ENST00000394767 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
CXXC4-201ENST00000394767 PLAC4Q8WY50 150 aa9.99□□□□□ -0.81
CXXC4-201ENST00000394767 DNAH11Q96DT5 4516 aa9.91□□□□□ -0.82
CXXC4-201ENST00000394767 CMYA5Q8N3K9 4069 aa9.85□□□□□ -0.83
CXXC4-201ENST00000394767 DNAH3Q8TD57 4116 aa9.84□□□□□ -0.83
CXXC4-201ENST00000394767 DNAH10Q8IVF4 4471 aa9.81□□□□□ -0.84
CXXC4-201ENST00000394767 DYNC1H1Q14204 4646 aaKnown RBP9.79□□□□□ -0.84
CXXC4-201ENST00000394767 KRTAP10-10P60014 251 aa9.77□□□□□ -0.85
CXXC4-201ENST00000394767 LRP1BQ9NZR2 4599 aa9.73□□□□□ -0.85
CXXC4-201ENST00000394767 DNAH17Q9UFH2 4485 aa9.73□□□□□ -0.85
CXXC4-201ENST00000394767 A8MU10 97 aa9.72□□□□□ -0.85
CXXC4-201ENST00000394767 KMT2AQ03164 3969 aa9.7□□□□□ -0.86
CXXC4-201ENST00000394767 FAT1Q14517 4588 aa9.68□□□□□ -0.86
CXXC4-201ENST00000394767 DYNC2H1Q8NCM8 4307 aaKnown RBP9.6□□□□□ -0.87
CXXC4-201ENST00000394767 KTN1-AS1Q86SY8 53 aa9.6□□□□□ -0.87
CXXC4-201ENST00000394767 DNAH2Q9P225 4427 aa9.58□□□□□ -0.88
CXXC4-201ENST00000394767 LUZP6Q538Z0 58 aa9.56□□□□□ -0.88
CXXC4-201ENST00000394767 ROMO1P60602 79 aa9.56□□□□□ -0.88
CXXC4-201ENST00000394767 RYR1P21817 5038 aa9.54□□□□□ -0.88
CXXC4-201ENST00000394767 KIAA1109Q2LD37 5005 aa9.51□□□□□ -0.89
CXXC4-201ENST00000394767 FAT2Q9NYQ8 4349 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms