RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 DSCR10P59022 87 aa9.31□□□□□ -0.92
PDLIM7-205ENST00000393551 KRTAP16-1A8MUX0 517 aa9.3□□□□□ -0.92
PDLIM7-205ENST00000393551 JMJD7-PLA2G4BH0Y9G9 81 aa9.29□□□□□ -0.92
PDLIM7-205ENST00000393551 MTURNQ8N3F0 131 aa9.29□□□□□ -0.92
PDLIM7-205ENST00000393551 KRTAP9-8Q9BYQ0 159 aa9.28□□□□□ -0.92
PDLIM7-205ENST00000393551 C21orf62-AS1Q17RA5 79 aa9.27□□□□□ -0.93
PDLIM7-205ENST00000393551 ETDBQ3ZM63 59 aa9.26□□□□□ -0.93
PDLIM7-205ENST00000393551 NOTCH2NLQ7Z3S9 236 aa9.24□□□□□ -0.93
PDLIM7-205ENST00000393551 SIGMAR1Q99720 223 aa9.24□□□□□ -0.93
PDLIM7-205ENST00000393551 USH2AO75445 5202 aa9.23□□□□□ -0.93
PDLIM7-205ENST00000393551 TRBV7-4A0A0J9YYF1 115 aa9.22□□□□□ -0.93
PDLIM7-205ENST00000393551 A0A1B0GV72 72 aa9.22□□□□□ -0.93
PDLIM7-205ENST00000393551 PDE6GP18545 87 aa9.22□□□□□ -0.93
PDLIM7-205ENST00000393551 LINC00313P59037 77 aa9.21□□□□□ -0.94
PDLIM7-205ENST00000393551 RBM3P98179 157 aaKnown RBP9.21□□□□□ -0.94
PDLIM7-205ENST00000393551 J3QR89 54 aa9.2□□□□□ -0.94
PDLIM7-205ENST00000393551 IGKV4-1P06312 121 aa9.2□□□□□ -0.94
PDLIM7-205ENST00000393551 DEFB116Q30KQ4 102 aa9.19□□□□□ -0.94
PDLIM7-205ENST00000393551 LINC00472Q9H8W2 130 aa9.19□□□□□ -0.94
PDLIM7-205ENST00000393551 SSPOA2VEC9 5147 aa9.19□□□□□ -0.94
PDLIM7-205ENST00000393551 DSCR8Q96T75 97 aa9.17□□□□□ -0.94
PDLIM7-205ENST00000393551 LOC110117498A0A087WWA1 95 aa9.16□□□□□ -0.94
PDLIM7-205ENST00000393551 K7ERU9 68 aa9.15□□□□□ -0.94
PDLIM7-205ENST00000393551 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
PDLIM7-205ENST00000393551 CCKP06307 115 aa9.14□□□□□ -0.95
PDLIM7-205ENST00000393551 HRES1P13985 223 aa9.13□□□□□ -0.95
PDLIM7-205ENST00000393551 C14orf132Q9NPU4 83 aa9.12□□□□□ -0.95
PDLIM7-205ENST00000393551 A0A1B0GW54 56 aa9.11□□□□□ -0.95
PDLIM7-205ENST00000393551 MT2AP02795 61 aa9.11□□□□□ -0.95
PDLIM7-205ENST00000393551 ACYP1P07311 99 aa9.11□□□□□ -0.95
PDLIM7-205ENST00000393551 IGHV6-1A0A0B4J1U7 121 aa9.1□□□□□ -0.95
PDLIM7-205ENST00000393551 FAM240AA0A1B0GVK7 77 aa9.09□□□□□ -0.95
PDLIM7-205ENST00000393551 Q6ZQT0 140 aa9.09□□□□□ -0.95
PDLIM7-205ENST00000393551 FAM236DA0A1B0GTK5 79 aa9.06□□□□□ -0.96
PDLIM7-205ENST00000393551 FAM236CP0DP71 79 aa9.06□□□□□ -0.96
PDLIM7-205ENST00000393551 MT1FP04733 61 aa9.05□□□□□ -0.96
PDLIM7-205ENST00000393551 A0A1B0GVX0 72 aa9.03□□□□□ -0.96
PDLIM7-205ENST00000393551 VPS25Q9BRG1 176 aa9.03□□□□□ -0.96
PDLIM7-205ENST00000393551 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.02□□□□□ -0.97
PDLIM7-205ENST00000393551 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
PDLIM7-205ENST00000393551 LCE2BO14633 110 aa9□□□□□ -0.97
PDLIM7-205ENST00000393551 KRTAP9-3Q9BYQ3 159 aa9□□□□□ -0.97
PDLIM7-205ENST00000393551 C8orf87E5RJ46 101 aa8.99□□□□□ -0.97
PDLIM7-205ENST00000393551 FCGBPQ9Y6R7 5405 aaPredicted RBP8.98□□□□□ -0.97
PDLIM7-205ENST00000393551 ZCCHC13Q8WW36 166 aaKnown RBP8.95□□□□□ -0.98
PDLIM7-205ENST00000393551 KRTAP9-7A8MTY7 169 aa8.94□□□□□ -0.98
PDLIM7-205ENST00000393551 UBL5Q9BZL1 73 aa8.94□□□□□ -0.98
PDLIM7-205ENST00000393551 KRTAP10-10P60014 251 aa8.93□□□□□ -0.98
PDLIM7-205ENST00000393551 SPINK7P58062 85 aa8.92□□□□□ -0.98
PDLIM7-205ENST00000393551 LINC00846Q9NV44 126 aa8.92□□□□□ -0.98
PDLIM7-205ENST00000393551 J3KT08 172 aa8.91□□□□□ -0.98
PDLIM7-205ENST00000393551 Q8N9P0 234 aaPredicted RBP8.91□□□□□ -0.98
PDLIM7-205ENST00000393551 NREPQ16612 68 aa8.89□□□□□ -0.99
PDLIM7-205ENST00000393551 LINC00643Q86TS7 51 aa8.89□□□□□ -0.99
PDLIM7-205ENST00000393551 KRTAP19-1Q8IUB9 90 aa8.89□□□□□ -0.99
PDLIM7-205ENST00000393551 ATP5EP2Q5VTU8 51 aa8.86□□□□□ -0.99
PDLIM7-205ENST00000393551 Q6ZVQ6 151 aa8.85□□□□□ -0.99
PDLIM7-205ENST00000393551 C8orf17Q9NRJ1 99 aa8.84□□□□□ -0.99
PDLIM7-205ENST00000393551 IGKV3D-7A0A0C4DH55 119 aa8.83□□□□□ -1
PDLIM7-205ENST00000393551 A8MWP4 228 aa8.83□□□□□ -1
PDLIM7-205ENST00000393551 NDUFB1O75438 58 aa8.83□□□□□ -1
PDLIM7-205ENST00000393551 CXCL6P80162 114 aa8.81□□□□□ -1
PDLIM7-205ENST00000393551 WFDC13Q8IUB5 93 aa8.79□□□□□ -1
PDLIM7-205ENST00000393551 IMUPQ9GZP8 106 aa8.78□□□□□ -1
PDLIM7-205ENST00000393551 BPY2O14599 106 aa8.77□□□□□ -1.01
PDLIM7-205ENST00000393551 PRR15Q8IV56 129 aa8.75□□□□□ -1.01
PDLIM7-205ENST00000393551 MACF1Q9UPN3 7388 aaKnown RBP8.72□□□□□ -1.01
PDLIM7-205ENST00000393551 MMP24-AS1A0A0U1RRL7 71 aa8.71□□□□□ -1.02
PDLIM7-205ENST00000393551 MT-ATP8P03928 68 aa8.71□□□□□ -1.02
PDLIM7-205ENST00000393551 SYNE2Q8WXH0 6885 aaKnown RBP8.68□□□□□ -1.02
PDLIM7-205ENST00000393551 KRTAP19-6Q3LI70 58 aa8.68□□□□□ -1.02
PDLIM7-205ENST00000393551 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
PDLIM7-205ENST00000393551 MRPL34Q9BQ48 92 aaKnown RBP8.67□□□□□ -1.02
PDLIM7-205ENST00000393551 K7EQZ3 153 aa8.64□□□□□ -1.03
PDLIM7-205ENST00000393551 HIST1H4AP62805 103 aaKnown RBP8.63□□□□□ -1.03
PDLIM7-205ENST00000393551 hDV103S1A0JD37 113 aa8.61□□□□□ -1.03
PDLIM7-205ENST00000393551 SCGB1A1P11684 91 aa8.6□□□□□ -1.03
PDLIM7-205ENST00000393551 H1FX-AS1Q4G0G2 97 aa8.6□□□□□ -1.03
PDLIM7-205ENST00000393551 Q5W150 140 aa8.59□□□□□ -1.03
PDLIM7-205ENST00000393551 NDUFS5O43920 106 aa8.57□□□□□ -1.04
PDLIM7-205ENST00000393551 Q8N9L7 120 aa8.55□□□□□ -1.04
PDLIM7-205ENST00000393551 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
PDLIM7-205ENST00000393551 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.05
PDLIM7-205ENST00000393551 IGKV2-30P06310 120 aa8.52□□□□□ -1.05
PDLIM7-205ENST00000393551 A0A087WVE0 104 aa8.51□□□□□ -1.05
PDLIM7-205ENST00000393551 FAM236AA0A1B0GUQ0 79 aa8.49□□□□□ -1.05
PDLIM7-205ENST00000393551 FAM236BA0A1B0GV22 79 aa8.49□□□□□ -1.05
PDLIM7-205ENST00000393551 CASC2Q6XLA1 102 aa8.48□□□□□ -1.05
PDLIM7-205ENST00000393551 C7orf65Q6ZTY9 151 aa8.48□□□□□ -1.05
PDLIM7-205ENST00000393551 SMIM20Q8N5G0 67 aa8.48□□□□□ -1.05
PDLIM7-205ENST00000393551 ATOX1O00244 68 aa8.47□□□□□ -1.05
PDLIM7-205ENST00000393551 C4orf26Q17RF5 130 aa8.43□□□□□ -1.06
PDLIM7-205ENST00000393551 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.06
PDLIM7-205ENST00000393551 KRTAP3-1Q9BYR8 98 aa8.38□□□□□ -1.07
PDLIM7-205ENST00000393551 TRAV7A0A075B6U4 112 aa8.36□□□□□ -1.07
PDLIM7-205ENST00000393551 UQCRQO14949 82 aa8.35□□□□□ -1.07
PDLIM7-205ENST00000393551 KRTAP6-3Q3LI67 103 aa8.35□□□□□ -1.07
PDLIM7-205ENST00000393551 OCR1Q9BZK8 76 aa8.35□□□□□ -1.07
PDLIM7-205ENST00000393551 SERP2Q8N6R1 65 aa8.34□□□□□ -1.07
PDLIM7-205ENST00000393551 ANAPC13Q9BS18 74 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms