RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 DMBT1Q9UGM3 2413 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-203ENST00000393287 SMG1Q96Q15 3661 aaKnown RBP4.75□□□□□ -1.65
ATXN3-203ENST00000393287 CSAG1Q6PB30 78 aa4.75□□□□□ -1.65
ATXN3-203ENST00000393287 M0R2T5 61 aa4.73□□□□□ -1.65
ATXN3-203ENST00000393287 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
ATXN3-203ENST00000393287 Q5W150 140 aa4.73□□□□□ -1.65
ATXN3-203ENST00000393287 PKD1L1Q8TDX9 2849 aa4.72□□□□□ -1.65
ATXN3-203ENST00000393287 H7BZZ5 65 aa4.72□□□□□ -1.65
ATXN3-203ENST00000393287 CELSR1Q9NYQ6 3014 aa4.72□□□□□ -1.65
ATXN3-203ENST00000393287 ASPMQ8IZT6 3477 aa4.72□□□□□ -1.65
ATXN3-203ENST00000393287 ANK3Q12955 4377 aaKnown RBP4.71□□□□□ -1.66
ATXN3-203ENST00000393287 FLG2Q5D862 2391 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-203ENST00000393287 SPINK7P58062 85 aa4.7□□□□□ -1.66
ATXN3-203ENST00000393287 Q75L30 129 aa4.7□□□□□ -1.66
ATXN3-203ENST00000393287 MIR22HGQ0VDD5 57 aa4.7□□□□□ -1.66
ATXN3-203ENST00000393287 A0A087X002 238 aa4.7□□□□□ -1.66
ATXN3-203ENST00000393287 ZFHX3Q15911 3703 aa4.68□□□□□ -1.66
ATXN3-203ENST00000393287 A0A1B0GVY2 172 aa4.68□□□□□ -1.66
ATXN3-203ENST00000393287 KRTAP7-1Q8IUC3 87 aa4.68□□□□□ -1.66
ATXN3-203ENST00000393287 ZFHX4Q86UP3 3567 aa4.67□□□□□ -1.66
ATXN3-203ENST00000393287 LCA10Q71F78 164 aa4.67□□□□□ -1.66
ATXN3-203ENST00000393287 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
ATXN3-203ENST00000393287 KRTAP13-2Q52LG2 175 aa4.64□□□□□ -1.67
ATXN3-203ENST00000393287 KRTAP11-1Q8IUC1 163 aa4.64□□□□□ -1.67
ATXN3-203ENST00000393287 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
ATXN3-203ENST00000393287 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
ATXN3-203ENST00000393287 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-203ENST00000393287 Q1T7F1 81 aa4.62□□□□□ -1.67
ATXN3-203ENST00000393287 MEGF8Q7Z7M0 2845 aa4.61□□□□□ -1.67
ATXN3-203ENST00000393287 CRIPTQ9P021 101 aa4.61□□□□□ -1.67
ATXN3-203ENST00000393287 NBPF19A0A087WUL8 3843 aa4.61□□□□□ -1.67
ATXN3-203ENST00000393287 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
ATXN3-203ENST00000393287 DNHD1Q96M86 4753 aa4.6□□□□□ -1.67
ATXN3-203ENST00000393287 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-203ENST00000393287 A0A1B0GU33 70 aa4.6□□□□□ -1.67
ATXN3-203ENST00000393287 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
ATXN3-203ENST00000393287 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
ATXN3-203ENST00000393287 CSMD1Q96PZ7 3565 aa4.59□□□□□ -1.68
ATXN3-203ENST00000393287 WDFY3Q8IZQ1 3526 aa4.56□□□□□ -1.68
ATXN3-203ENST00000393287 C20orf166-AS1Q96NR2 134 aa4.54□□□□□ -1.68
ATXN3-203ENST00000393287 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
ATXN3-203ENST00000393287 A8MUU9 505 aa4.54□□□□□ -1.68
ATXN3-203ENST00000393287 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
ATXN3-203ENST00000393287 TPRXLQ17RH7 258 aa4.54□□□□□ -1.68
ATXN3-203ENST00000393287 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
ATXN3-203ENST00000393287 R4GN34 69 aa4.53□□□□□ -1.68
ATXN3-203ENST00000393287 A0A0D9SG42 100 aa4.5□□□□□ -1.69
ATXN3-203ENST00000393287 NOTCH2NLQ7Z3S9 236 aa4.49□□□□□ -1.69
ATXN3-203ENST00000393287 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
ATXN3-203ENST00000393287 CSMD2Q7Z408 3487 aa4.48□□□□□ -1.69
ATXN3-203ENST00000393287 CYSTM1Q9H1C7 97 aa4.47□□□□□ -1.69
ATXN3-203ENST00000393287 BSNQ9UPA5 3926 aa4.46□□□□□ -1.7
ATXN3-203ENST00000393287 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
ATXN3-203ENST00000393287 SPENQ96T58 3664 aaKnown RBP4.44□□□□□ -1.7
ATXN3-203ENST00000393287 ADM2Q7Z4H4 148 aa4.44□□□□□ -1.7
ATXN3-203ENST00000393287 M0QZ58 72 aa4.44□□□□□ -1.7
ATXN3-203ENST00000393287 XP32Q5T750 250 aa4.43□□□□□ -1.7
ATXN3-203ENST00000393287 KRTAP10-8P60410 259 aa4.43□□□□□ -1.7
ATXN3-203ENST00000393287 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
ATXN3-203ENST00000393287 SRRM2Q9UQ35 2752 aaKnown RBP4.38□□□□□ -1.71
ATXN3-203ENST00000393287 TRRAPQ9Y4A5 3859 aa4.38□□□□□ -1.71
ATXN3-203ENST00000393287 KRTAP13-3Q3SY46 172 aa4.38□□□□□ -1.71
ATXN3-203ENST00000393287 ALMS1Q8TCU4 4167 aa4.36□□□□□ -1.71
ATXN3-203ENST00000393287 Q5VV11 94 aa4.34□□□□□ -1.71
ATXN3-203ENST00000393287 ROMO1P60602 79 aa4.32□□□□□ -1.72
ATXN3-203ENST00000393287 KRTAP16-1A8MUX0 517 aa4.31□□□□□ -1.72
ATXN3-203ENST00000393287 AKAP9Q99996 3911 aa4.3□□□□□ -1.72
ATXN3-203ENST00000393287 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
ATXN3-203ENST00000393287 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
ATXN3-203ENST00000393287 SVEP1Q4LDE5 3571 aa4.27□□□□□ -1.73
ATXN3-203ENST00000393287 DNAH9Q9NYC9 4486 aa4.26□□□□□ -1.73
ATXN3-203ENST00000393287 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
ATXN3-203ENST00000393287 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-203ENST00000393287 HUWE1Q7Z6Z7 4374 aaKnown RBP4.24□□□□□ -1.73
ATXN3-203ENST00000393287 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
ATXN3-203ENST00000393287 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
ATXN3-203ENST00000393287 COL7A1Q02388 2944 aa4.23□□□□□ -1.73
ATXN3-203ENST00000393287 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
ATXN3-203ENST00000393287 KIAA1109Q2LD37 5005 aa4.23□□□□□ -1.73
ATXN3-203ENST00000393287 KRTAP4-5Q9BYR2 181 aa4.21□□□□□ -1.74
ATXN3-203ENST00000393287 A6NN06 94 aa4.2□□□□□ -1.74
ATXN3-203ENST00000393287 RYR2Q92736 4967 aa4.2□□□□□ -1.74
ATXN3-203ENST00000393287 CUBNO60494 3623 aa4.2□□□□□ -1.74
ATXN3-203ENST00000393287 DNAH5Q8TE73 4624 aa4.19□□□□□ -1.74
ATXN3-203ENST00000393287 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
ATXN3-203ENST00000393287 RYR1P21817 5038 aa4.16□□□□□ -1.74
ATXN3-203ENST00000393287 ZNF469Q96JG9 3925 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-203ENST00000393287 TNP1P09430 55 aa4.15□□□□□ -1.75
ATXN3-203ENST00000393287 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
ATXN3-203ENST00000393287 DNAH10Q8IVF4 4471 aa4.13□□□□□ -1.75
ATXN3-203ENST00000393287 ANK2Q01484 3957 aa4.13□□□□□ -1.75
ATXN3-203ENST00000393287 A8MU10 97 aa4.12□□□□□ -1.75
ATXN3-203ENST00000393287 KRTAP10-10P60014 251 aa4.11□□□□□ -1.75
ATXN3-203ENST00000393287 H0YAA0 97 aa4.1□□□□□ -1.75
ATXN3-203ENST00000393287 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
ATXN3-203ENST00000393287 RYR3Q15413 4870 aa4.09□□□□□ -1.76
ATXN3-203ENST00000393287 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
ATXN3-203ENST00000393287 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
ATXN3-203ENST00000393287 VPS13DQ5THJ4 4388 aa4.05□□□□□ -1.76
ATXN3-203ENST00000393287 HYDINQ4G0P3 5121 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms