RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 SERP1Q9Y6X1 66 aa10.78□□□□□ -0.68
STRADB-202ENST00000392249 DYNC1H1Q14204 4646 aaKnown RBP10.77□□□□□ -0.69
STRADB-202ENST00000392249 A0A1B0GVY2 172 aa10.76□□□□□ -0.69
STRADB-202ENST00000392249 PLA2G1BP04054 148 aaKnown RBP10.73□□□□□ -0.69
STRADB-202ENST00000392249 TRAV22A0A0B4J277 110 aa10.72□□□□□ -0.69
STRADB-202ENST00000392249 SMR3BP02814 79 aaPredicted RBP10.72□□□□□ -0.69
STRADB-202ENST00000392249 RYR2Q92736 4967 aa10.72□□□□□ -0.69
STRADB-202ENST00000392249 NDUFS5O43920 106 aa10.72□□□□□ -0.69
STRADB-202ENST00000392249 KMT2CQ8NEZ4 4911 aaKnown RBP10.71□□□□□ -0.69
STRADB-202ENST00000392249 MRPL34Q9BQ48 92 aaKnown RBP10.71□□□□□ -0.69
STRADB-202ENST00000392249 H3BPC8 53 aa10.69□□□□□ -0.7
STRADB-202ENST00000392249 TP53AIP1Q9HCN2 124 aa10.69□□□□□ -0.7
STRADB-202ENST00000392249 C1orf64Q8NEQ6 169 aa10.68□□□□□ -0.7
STRADB-202ENST00000392249 C1orf195Q5TG92 126 aa10.66□□□□□ -0.7
STRADB-202ENST00000392249 Q5XG85 94 aa10.66□□□□□ -0.7
STRADB-202ENST00000392249 TYMSOSQ8TAI1 123 aa10.66□□□□□ -0.7
STRADB-202ENST00000392249 APOBP04114 4563 aaKnown RBP10.64□□□□□ -0.71
STRADB-202ENST00000392249 PRR4Q16378 134 aa10.64□□□□□ -0.71
STRADB-202ENST00000392249 LIMD2Q9BT23 127 aa10.62□□□□□ -0.71
STRADB-202ENST00000392249 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
STRADB-202ENST00000392249 FAT1Q14517 4588 aa10.61□□□□□ -0.71
STRADB-202ENST00000392249 C8orf87E5RJ46 101 aa10.6□□□□□ -0.71
STRADB-202ENST00000392249 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
STRADB-202ENST00000392249 LINC00313P59037 77 aa10.57□□□□□ -0.72
STRADB-202ENST00000392249 SPINK1P00995 79 aa10.56□□□□□ -0.72
STRADB-202ENST00000392249 SMIM26A0A096LP01 95 aa10.55□□□□□ -0.72
STRADB-202ENST00000392249 KRTAP10-4P60372 401 aaPredicted RBP10.55□□□□□ -0.72
STRADB-202ENST00000392249 CYP4F30PQ9H0H9 118 aa10.55□□□□□ -0.72
STRADB-202ENST00000392249 FP248Q71RG6 208 aaPredicted RBP10.53□□□□□ -0.72
STRADB-202ENST00000392249 PCOTHQ58A44 107 aa10.53□□□□□ -0.72
STRADB-202ENST00000392249 SPANXA2-OT1Q8N9U9 137 aa10.53□□□□□ -0.72
STRADB-202ENST00000392249 Q5W150 140 aa10.52□□□□□ -0.72
STRADB-202ENST00000392249 LINC00304Q8N9R0 145 aa10.52□□□□□ -0.72
STRADB-202ENST00000392249 C4orf26Q17RF5 130 aa10.51□□□□□ -0.73
STRADB-202ENST00000392249 KRTAP13-3Q3SY46 172 aa10.48□□□□□ -0.73
STRADB-202ENST00000392249 Q8N9P0 234 aaPredicted RBP10.46□□□□□ -0.74
STRADB-202ENST00000392249 KRTAP16-1A8MUX0 517 aa10.45□□□□□ -0.74
STRADB-202ENST00000392249 SPAG11AQ6PDA7 123 aa10.43□□□□□ -0.74
STRADB-202ENST00000392249 IGLV7-46A0A075B6I9 117 aa10.43□□□□□ -0.74
STRADB-202ENST00000392249 RPS29P62273 56 aaKnown RBP10.43□□□□□ -0.74
STRADB-202ENST00000392249 LOC101927531A0A1B0GV80 90 aa10.42□□□□□ -0.74
STRADB-202ENST00000392249 MPLKIPQ8TAP9 179 aa10.42□□□□□ -0.74
STRADB-202ENST00000392249 RETNLBQ9BQ08 111 aa10.42□□□□□ -0.74
STRADB-202ENST00000392249 RYR3Q15413 4870 aa10.4□□□□□ -0.74
STRADB-202ENST00000392249 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
STRADB-202ENST00000392249 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
STRADB-202ENST00000392249 COA5Q86WW8 74 aa10.31□□□□□ -0.76
STRADB-202ENST00000392249 HSPG2P98160 4391 aa10.29□□□□□ -0.76
STRADB-202ENST00000392249 IGKV2-30P06310 120 aa10.26□□□□□ -0.77
STRADB-202ENST00000392249 Q5VSD8 79 aa10.26□□□□□ -0.77
STRADB-202ENST00000392249 Q1T7F1 81 aa10.25□□□□□ -0.77
STRADB-202ENST00000392249 HRES1P13985 223 aa10.23□□□□□ -0.77
STRADB-202ENST00000392249 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
STRADB-202ENST00000392249 C9orf92A6NGG3 77 aa10.22□□□□□ -0.77
STRADB-202ENST00000392249 IGKV2D-30A0A075B6S6 120 aa10.21□□□□□ -0.77
STRADB-202ENST00000392249 FLG2Q5D862 2391 aaPredicted RBP10.21□□□□□ -0.78
STRADB-202ENST00000392249 RYR1P21817 5038 aa10.18□□□□□ -0.78
STRADB-202ENST00000392249 Q8N1X5 172 aa10.17□□□□□ -0.78
STRADB-202ENST00000392249 TNXBP22105 4242 aa10.16□□□□□ -0.78
STRADB-202ENST00000392249 PSPHP1O15172 72 aa10.16□□□□□ -0.78
STRADB-202ENST00000392249 KRTAP17-1Q9BYP8 105 aa10.14□□□□□ -0.79
STRADB-202ENST00000392249 V9GYY9 64 aa10.14□□□□□ -0.79
STRADB-202ENST00000392249 KRTAP10-8P60410 259 aa10.12□□□□□ -0.79
STRADB-202ENST00000392249 DMAC1Q96GE9 116 aa10.12□□□□□ -0.79
STRADB-202ENST00000392249 ACYP2P14621 99 aa10.11□□□□□ -0.79
STRADB-202ENST00000392249 C20orf166-AS1Q96NR2 134 aa10.1□□□□□ -0.79
STRADB-202ENST00000392249 KIAA1109Q2LD37 5005 aa10.1□□□□□ -0.79
STRADB-202ENST00000392249 A8MUN3 132 aa10.09□□□□□ -0.79
STRADB-202ENST00000392249 A8MUU9 505 aa10.09□□□□□ -0.79
STRADB-202ENST00000392249 C7orf65Q6ZTY9 151 aa10.07□□□□□ -0.8
STRADB-202ENST00000392249 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
STRADB-202ENST00000392249 SVIPQ8NHG7 77 aa10.06□□□□□ -0.8
STRADB-202ENST00000392249 BRK1Q8WUW1 75 aa10.04□□□□□ -0.8
STRADB-202ENST00000392249 DMBT1Q9UGM3 2413 aaPredicted RBP10.03□□□□□ -0.8
STRADB-202ENST00000392249 PRR15LQ9BU68 103 aa10.03□□□□□ -0.8
STRADB-202ENST00000392249 EPPK1P58107 5090 aaKnown RBP10.01□□□□□ -0.81
STRADB-202ENST00000392249 Q5VV11 94 aa10.01□□□□□ -0.81
STRADB-202ENST00000392249 MYCBP2O75592 4640 aa10.01□□□□□ -0.81
STRADB-202ENST00000392249 CHKB-CPT1BH3BT56 60 aa10□□□□□ -0.81
STRADB-202ENST00000392249 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
STRADB-202ENST00000392249 PRO0628Q9UI54 55 aa9.95□□□□□ -0.82
STRADB-202ENST00000392249 Q75L30 129 aa9.94□□□□□ -0.82
STRADB-202ENST00000392249 MT1HL1P0DM35 61 aa9.91□□□□□ -0.82
STRADB-202ENST00000392249 SPINK7P58062 85 aa9.88□□□□□ -0.83
STRADB-202ENST00000392249 ATP11AUNQ6ZP68 121 aa9.81□□□□□ -0.84
STRADB-202ENST00000392249 A6NED7 52 aa9.8□□□□□ -0.84
STRADB-202ENST00000392249 XP32Q5T750 250 aa9.8□□□□□ -0.84
STRADB-202ENST00000392249 A8MU10 97 aa9.79□□□□□ -0.84
STRADB-202ENST00000392249 RPL37P61927 97 aaKnown RBP9.78□□□□□ -0.84
STRADB-202ENST00000392249 KRTAP3-1Q9BYR8 98 aa9.76□□□□□ -0.85
STRADB-202ENST00000392249 KRTAP4-5Q9BYR2 181 aa9.75□□□□□ -0.85
STRADB-202ENST00000392249 A0A1B0GU69 56 aa9.72□□□□□ -0.85
STRADB-202ENST00000392249 LCA10Q71F78 164 aa9.7□□□□□ -0.86
STRADB-202ENST00000392249 COX6B2Q6YFQ2 88 aa9.66□□□□□ -0.86
STRADB-202ENST00000392249 CDC42SE1Q9NRR8 79 aa9.64□□□□□ -0.87
STRADB-202ENST00000392249 SPTSSBQ8NFR3 76 aa9.61□□□□□ -0.87
STRADB-202ENST00000392249 ABCA13Q86UQ4 5058 aa9.58□□□□□ -0.88
STRADB-202ENST00000392249 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
STRADB-202ENST00000392249 LRP2P98164 4655 aa9.55□□□□□ -0.88
STRADB-202ENST00000392249 LPAP08519 4548 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms