RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 TRAV7A0A075B6U4 112 aa6.72□□□□□ -1.33
SMARCAL1-203ENST00000392128 KTN1-AS1Q86SY8 53 aa6.72□□□□□ -1.33
SMARCAL1-203ENST00000392128 KRTAP10-4P60372 401 aaPredicted RBP6.71□□□□□ -1.33
SMARCAL1-203ENST00000392128 Q96NJ1 140 aa6.71□□□□□ -1.33
SMARCAL1-203ENST00000392128 PLA2G1BP04054 148 aaKnown RBP6.7□□□□□ -1.34
SMARCAL1-203ENST00000392128 A8MWP4 228 aa6.69□□□□□ -1.34
SMARCAL1-203ENST00000392128 HCG22E2RYF7 251 aa6.66□□□□□ -1.34
SMARCAL1-203ENST00000392128 ASB16-AS1Q495Z4 193 aa6.66□□□□□ -1.34
SMARCAL1-203ENST00000392128 MPLKIPQ8TAP9 179 aa6.66□□□□□ -1.34
SMARCAL1-203ENST00000392128 FAT1Q14517 4588 aa6.66□□□□□ -1.34
SMARCAL1-203ENST00000392128 CDK2AP2O75956 126 aa6.65□□□□□ -1.34
SMARCAL1-203ENST00000392128 NDUFB1O75438 58 aa6.65□□□□□ -1.35
SMARCAL1-203ENST00000392128 TYMSOSQ8TAI1 123 aa6.65□□□□□ -1.35
SMARCAL1-203ENST00000392128 C8orf87E5RJ46 101 aa6.64□□□□□ -1.35
SMARCAL1-203ENST00000392128 NDUFS5O43920 106 aa6.64□□□□□ -1.35
SMARCAL1-203ENST00000392128 Q1T7F1 81 aa6.63□□□□□ -1.35
SMARCAL1-203ENST00000392128 OCR1Q9BZK8 76 aa6.62□□□□□ -1.35
SMARCAL1-203ENST00000392128 KRTAP29-1A8MX34 341 aaPredicted RBP6.61□□□□□ -1.35
SMARCAL1-203ENST00000392128 FAM229AH3BQW9 127 aa6.61□□□□□ -1.35
SMARCAL1-203ENST00000392128 PRR26Q8N8Z3 221 aa6.61□□□□□ -1.35
SMARCAL1-203ENST00000392128 WFDC13Q8IUB5 93 aa6.6□□□□□ -1.35
SMARCAL1-203ENST00000392128 LIMD2Q9BT23 127 aa6.6□□□□□ -1.35
SMARCAL1-203ENST00000392128 A0A1B0GVX0 72 aa6.6□□□□□ -1.35
SMARCAL1-203ENST00000392128 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
SMARCAL1-203ENST00000392128 SPINK1P00995 79 aa6.59□□□□□ -1.35
SMARCAL1-203ENST00000392128 CASC2Q6XLA1 102 aa6.59□□□□□ -1.35
SMARCAL1-203ENST00000392128 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
SMARCAL1-203ENST00000392128 HSPG2P98160 4391 aa6.58□□□□□ -1.36
SMARCAL1-203ENST00000392128 SNURFQ9Y675 71 aa6.57□□□□□ -1.36
SMARCAL1-203ENST00000392128 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
SMARCAL1-203ENST00000392128 RPS29P62273 56 aaKnown RBP6.57□□□□□ -1.36
SMARCAL1-203ENST00000392128 Q5VSD8 79 aa6.57□□□□□ -1.36
SMARCAL1-203ENST00000392128 SPAG11AQ6PDA7 123 aa6.57□□□□□ -1.36
SMARCAL1-203ENST00000392128 LINC00304Q8N9R0 145 aa6.57□□□□□ -1.36
SMARCAL1-203ENST00000392128 C8orf17Q9NRJ1 99 aa6.57□□□□□ -1.36
SMARCAL1-203ENST00000392128 RYR1P21817 5038 aa6.56□□□□□ -1.36
SMARCAL1-203ENST00000392128 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
SMARCAL1-203ENST00000392128 TMEM254Q8TBM7 123 aa6.52□□□□□ -1.37
SMARCAL1-203ENST00000392128 LCA10Q71F78 164 aa6.51□□□□□ -1.37
SMARCAL1-203ENST00000392128 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
SMARCAL1-203ENST00000392128 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
SMARCAL1-203ENST00000392128 EPPK1P58107 5090 aaKnown RBP6.48□□□□□ -1.37
SMARCAL1-203ENST00000392128 ATP11AUNQ6ZP68 121 aa6.48□□□□□ -1.37
SMARCAL1-203ENST00000392128 KRTAP17-1Q9BYP8 105 aa6.48□□□□□ -1.37
SMARCAL1-203ENST00000392128 A6NN06 94 aa6.48□□□□□ -1.37
SMARCAL1-203ENST00000392128 A8MUN3 132 aa6.48□□□□□ -1.37
SMARCAL1-203ENST00000392128 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
SMARCAL1-203ENST00000392128 Q8N1X5 172 aa6.47□□□□□ -1.37
SMARCAL1-203ENST00000392128 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
SMARCAL1-203ENST00000392128 KIAA1109Q2LD37 5005 aa6.47□□□□□ -1.37
SMARCAL1-203ENST00000392128 TRAV22A0A0B4J277 110 aa6.46□□□□□ -1.38
SMARCAL1-203ENST00000392128 LINC00313P59037 77 aa6.46□□□□□ -1.38
SMARCAL1-203ENST00000392128 KRTAP10-8P60410 259 aa6.45□□□□□ -1.38
SMARCAL1-203ENST00000392128 MP68P56378 58 aa6.44□□□□□ -1.38
SMARCAL1-203ENST00000392128 ZCCHC13Q8WW36 166 aaKnown RBP6.44□□□□□ -1.38
SMARCAL1-203ENST00000392128 H0Y9P7 68 aa6.42□□□□□ -1.38
SMARCAL1-203ENST00000392128 H3BPC8 53 aa6.42□□□□□ -1.38
SMARCAL1-203ENST00000392128 PSPHP1O15172 72 aa6.42□□□□□ -1.38
SMARCAL1-203ENST00000392128 TNXBP22105 4242 aa6.41□□□□□ -1.38
SMARCAL1-203ENST00000392128 KRTAP16-1A8MUX0 517 aa6.41□□□□□ -1.38
SMARCAL1-203ENST00000392128 LRP1Q07954 4544 aaKnown RBP6.41□□□□□ -1.38
SMARCAL1-203ENST00000392128 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.38
SMARCAL1-203ENST00000392128 Q5VV11 94 aa6.4□□□□□ -1.39
SMARCAL1-203ENST00000392128 FAT3Q8TDW7 4589 aa6.39□□□□□ -1.39
SMARCAL1-203ENST00000392128 LINC00208Q96KT6 92 aa6.39□□□□□ -1.39
SMARCAL1-203ENST00000392128 FLG2Q5D862 2391 aaPredicted RBP6.38□□□□□ -1.39
SMARCAL1-203ENST00000392128 A8MU10 97 aa6.38□□□□□ -1.39
SMARCAL1-203ENST00000392128 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
SMARCAL1-203ENST00000392128 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
SMARCAL1-203ENST00000392128 KRTAP13-3Q3SY46 172 aa6.35□□□□□ -1.39
SMARCAL1-203ENST00000392128 RETNLBQ9BQ08 111 aa6.34□□□□□ -1.39
SMARCAL1-203ENST00000392128 MT1HL1P0DM35 61 aa6.34□□□□□ -1.4
SMARCAL1-203ENST00000392128 Q5W150 140 aa6.34□□□□□ -1.4
SMARCAL1-203ENST00000392128 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.4
SMARCAL1-203ENST00000392128 LINC01554Q52M75 96 aa6.33□□□□□ -1.4
SMARCAL1-203ENST00000392128 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
SMARCAL1-203ENST00000392128 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
SMARCAL1-203ENST00000392128 LOC101927531A0A1B0GV80 90 aa6.29□□□□□ -1.4
SMARCAL1-203ENST00000392128 CDC42SE1Q9NRR8 79 aa6.29□□□□□ -1.4
SMARCAL1-203ENST00000392128 Q75L30 129 aa6.29□□□□□ -1.4
SMARCAL1-203ENST00000392128 C9orf92A6NGG3 77 aa6.28□□□□□ -1.4
SMARCAL1-203ENST00000392128 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
SMARCAL1-203ENST00000392128 SPANXA2-OT1Q8N9U9 137 aa6.27□□□□□ -1.41
SMARCAL1-203ENST00000392128 C20orf166-AS1Q96NR2 134 aa6.27□□□□□ -1.41
SMARCAL1-203ENST00000392128 A8MUU9 505 aa6.26□□□□□ -1.41
SMARCAL1-203ENST00000392128 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
SMARCAL1-203ENST00000392128 PCOTHQ58A44 107 aa6.24□□□□□ -1.41
SMARCAL1-203ENST00000392128 BIRC6Q9NR09 4857 aa6.23□□□□□ -1.41
SMARCAL1-203ENST00000392128 IGKV2-30P06310 120 aa6.23□□□□□ -1.41
SMARCAL1-203ENST00000392128 IGLV7-46A0A075B6I9 117 aa6.21□□□□□ -1.41
SMARCAL1-203ENST00000392128 A6NED7 52 aa6.21□□□□□ -1.42
SMARCAL1-203ENST00000392128 PRR4Q16378 134 aa6.2□□□□□ -1.42
SMARCAL1-203ENST00000392128 PRR15LQ9BU68 103 aa6.19□□□□□ -1.42
SMARCAL1-203ENST00000392128 HERC2O95714 4834 aa6.18□□□□□ -1.42
SMARCAL1-203ENST00000392128 IGKV2D-30A0A075B6S6 120 aa6.16□□□□□ -1.42
SMARCAL1-203ENST00000392128 ABCA13Q86UQ4 5058 aa6.15□□□□□ -1.42
SMARCAL1-203ENST00000392128 HRES1P13985 223 aa6.14□□□□□ -1.43
SMARCAL1-203ENST00000392128 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
SMARCAL1-203ENST00000392128 XP32Q5T750 250 aa6.13□□□□□ -1.43
SMARCAL1-203ENST00000392128 RPL37P61927 97 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms