RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
ZNF541-203ENST00000391901 DMDP11532 3685 aa8.68□□□□□ -1.02
ZNF541-203ENST00000391901 Q6ZR54 194 aa8.66□□□□□ -1.02
ZNF541-203ENST00000391901 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
ZNF541-203ENST00000391901 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
ZNF541-203ENST00000391901 KRTAP7-1Q8IUC3 87 aa8.62□□□□□ -1.03
ZNF541-203ENST00000391901 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
ZNF541-203ENST00000391901 CELSR1Q9NYQ6 3014 aa8.59□□□□□ -1.03
ZNF541-203ENST00000391901 LINC00483Q53H64 154 aa8.58□□□□□ -1.04
ZNF541-203ENST00000391901 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
ZNF541-203ENST00000391901 Q5W150 140 aa8.57□□□□□ -1.04
ZNF541-203ENST00000391901 ADM2Q7Z4H4 148 aa8.56□□□□□ -1.04
ZNF541-203ENST00000391901 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
ZNF541-203ENST00000391901 LCE6AA0A183 80 aa8.56□□□□□ -1.04
ZNF541-203ENST00000391901 TENM3Q9P273 2699 aa8.54□□□□□ -1.04
ZNF541-203ENST00000391901 A0A087X002 238 aa8.53□□□□□ -1.04
ZNF541-203ENST00000391901 A0A0D9SG42 100 aa8.52□□□□□ -1.05
ZNF541-203ENST00000391901 Q6ZSA8 131 aa8.5□□□□□ -1.05
ZNF541-203ENST00000391901 A0A1B0GU33 70 aa8.48□□□□□ -1.05
ZNF541-203ENST00000391901 TENM1Q9UKZ4 2725 aa8.48□□□□□ -1.05
ZNF541-203ENST00000391901 NOTCH2NLQ7Z3S9 236 aa8.45□□□□□ -1.06
ZNF541-203ENST00000391901 DMAC1Q96GE9 116 aa8.45□□□□□ -1.06
ZNF541-203ENST00000391901 Q5VSD8 79 aa8.45□□□□□ -1.06
ZNF541-203ENST00000391901 PKD1L1Q8TDX9 2849 aa8.43□□□□□ -1.06
ZNF541-203ENST00000391901 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
ZNF541-203ENST00000391901 FBN1P35555 2871 aaKnown RBP8.41□□□□□ -1.06
ZNF541-203ENST00000391901 SMG1Q96Q15 3661 aaKnown RBP8.4□□□□□ -1.06
ZNF541-203ENST00000391901 CSMD1Q96PZ7 3565 aa8.39□□□□□ -1.07
ZNF541-203ENST00000391901 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
ZNF541-203ENST00000391901 PDZD2O15018 2839 aa8.36□□□□□ -1.07
ZNF541-203ENST00000391901 VWFP04275 2813 aa8.35□□□□□ -1.07
ZNF541-203ENST00000391901 LUZP6Q538Z0 58 aa8.35□□□□□ -1.07
ZNF541-203ENST00000391901 OTOGQ6ZRI0 2925 aa8.34□□□□□ -1.07
ZNF541-203ENST00000391901 KRTAP16-1A8MUX0 517 aa8.34□□□□□ -1.07
ZNF541-203ENST00000391901 TENM2Q9NT68 2774 aa8.3□□□□□ -1.08
ZNF541-203ENST00000391901 KRTAP13-2Q52LG2 175 aa8.29□□□□□ -1.08
ZNF541-203ENST00000391901 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
ZNF541-203ENST00000391901 SVEP1Q4LDE5 3571 aa8.27□□□□□ -1.09
ZNF541-203ENST00000391901 ROMO1P60602 79 aa8.26□□□□□ -1.09
ZNF541-203ENST00000391901 S4R3F8 94 aa8.26□□□□□ -1.09
ZNF541-203ENST00000391901 TGP01266 2768 aa8.25□□□□□ -1.09
ZNF541-203ENST00000391901 A0A0A0MQY5 61 aa8.25□□□□□ -1.09
ZNF541-203ENST00000391901 CUBNO60494 3623 aa8.24□□□□□ -1.09
ZNF541-203ENST00000391901 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
ZNF541-203ENST00000391901 ZFHX3Q15911 3703 aa8.23□□□□□ -1.09
ZNF541-203ENST00000391901 NDUFAF8A1L188 74 aa8.2□□□□□ -1.1
ZNF541-203ENST00000391901 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
ZNF541-203ENST00000391901 M0R2T5 61 aa8.15□□□□□ -1.11
ZNF541-203ENST00000391901 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
ZNF541-203ENST00000391901 CSMD2Q7Z408 3487 aa8.13□□□□□ -1.11
ZNF541-203ENST00000391901 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
ZNF541-203ENST00000391901 KRTAP21-3Q3LHN1 58 aa8.12□□□□□ -1.11
ZNF541-203ENST00000391901 RPS29P62273 56 aaKnown RBP8.12□□□□□ -1.11
ZNF541-203ENST00000391901 H1FX-AS1Q4G0G2 97 aa8.11□□□□□ -1.11
ZNF541-203ENST00000391901 R4GN34 69 aa8.09□□□□□ -1.11
ZNF541-203ENST00000391901 SPENQ96T58 3664 aaKnown RBP8.08□□□□□ -1.12
ZNF541-203ENST00000391901 A8MUU9 505 aa8.04□□□□□ -1.12
ZNF541-203ENST00000391901 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
ZNF541-203ENST00000391901 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
ZNF541-203ENST00000391901 M0QZ58 72 aa7.96□□□□□ -1.13
ZNF541-203ENST00000391901 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
ZNF541-203ENST00000391901 BSNQ9UPA5 3926 aa7.85□□□□□ -1.15
ZNF541-203ENST00000391901 TRRAPQ9Y4A5 3859 aa7.84□□□□□ -1.15
ZNF541-203ENST00000391901 FBN3Q75N90 2809 aa7.82□□□□□ -1.16
ZNF541-203ENST00000391901 ANK3Q12955 4377 aaKnown RBP7.78□□□□□ -1.16
ZNF541-203ENST00000391901 XP32Q5T750 250 aa7.71□□□□□ -1.18
ZNF541-203ENST00000391901 H0YAA0 97 aa7.69□□□□□ -1.18
ZNF541-203ENST00000391901 C10orf95Q9H7T3 257 aa7.69□□□□□ -1.18
ZNF541-203ENST00000391901 KRTAP13-3Q3SY46 172 aa7.64□□□□□ -1.19
ZNF541-203ENST00000391901 COL7A1Q02388 2944 aa7.64□□□□□ -1.19
ZNF541-203ENST00000391901 MEGF8Q7Z7M0 2845 aa7.63□□□□□ -1.19
ZNF541-203ENST00000391901 PLAC4Q8WY50 150 aa7.61□□□□□ -1.19
ZNF541-203ENST00000391901 A0A1B0GVY2 172 aa7.56□□□□□ -1.2
ZNF541-203ENST00000391901 TPRXLQ17RH7 258 aa7.51□□□□□ -1.21
ZNF541-203ENST00000391901 VPS13CQ709C8 3753 aa7.5□□□□□ -1.21
ZNF541-203ENST00000391901 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
ZNF541-203ENST00000391901 P0C880 135 aa7.48□□□□□ -1.21
ZNF541-203ENST00000391901 ZNF469Q96JG9 3925 aaPredicted RBP7.36□□□□□ -1.23
ZNF541-203ENST00000391901 TNP1P09430 55 aa7.3□□□□□ -1.24
ZNF541-203ENST00000391901 AKAP9Q99996 3911 aa7.24□□□□□ -1.25
ZNF541-203ENST00000391901 HUWE1Q7Z6Z7 4374 aaKnown RBP7.21□□□□□ -1.26
ZNF541-203ENST00000391901 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
ZNF541-203ENST00000391901 CSMD3Q7Z407 3707 aa7.18□□□□□ -1.26
ZNF541-203ENST00000391901 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
ZNF541-203ENST00000391901 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
ZNF541-203ENST00000391901 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
ZNF541-203ENST00000391901 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
ZNF541-203ENST00000391901 MT1HL1P0DM35 61 aa7□□□□□ -1.29
ZNF541-203ENST00000391901 KRTAP12-1P59990 96 aa6.98□□□□□ -1.29
ZNF541-203ENST00000391901 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
ZNF541-203ENST00000391901 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
ZNF541-203ENST00000391901 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
ZNF541-203ENST00000391901 DNAH9Q9NYC9 4486 aa6.95□□□□□ -1.3
ZNF541-203ENST00000391901 DNHD1Q96M86 4753 aa6.91□□□□□ -1.3
ZNF541-203ENST00000391901 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
ZNF541-203ENST00000391901 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.31
ZNF541-203ENST00000391901 DNAH5Q8TE73 4624 aa6.82□□□□□ -1.32
ZNF541-203ENST00000391901 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
ZNF541-203ENST00000391901 DNAH11Q96DT5 4516 aa6.78□□□□□ -1.32
ZNF541-203ENST00000391901 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms