RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 KRTAP7-1Q8IUC3 87 aa4.7□□□□□ -1.66
NCBP3-201ENST00000389005 ASB16-AS1Q495Z4 193 aa4.7□□□□□ -1.66
NCBP3-201ENST00000389005 A0A087X002 238 aa4.69□□□□□ -1.66
NCBP3-201ENST00000389005 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
NCBP3-201ENST00000389005 KRTAP11-1Q8IUC1 163 aa4.68□□□□□ -1.66
NCBP3-201ENST00000389005 PKD1L1Q8TDX9 2849 aa4.68□□□□□ -1.66
NCBP3-201ENST00000389005 Q6ZSA8 131 aa4.67□□□□□ -1.66
NCBP3-201ENST00000389005 A6NN06 94 aa4.67□□□□□ -1.66
NCBP3-201ENST00000389005 S4R3F8 94 aa4.66□□□□□ -1.66
NCBP3-201ENST00000389005 KRTAP10-1P60331 282 aa4.66□□□□□ -1.66
NCBP3-201ENST00000389005 SPATA8Q6RVD6 105 aa4.66□□□□□ -1.66
NCBP3-201ENST00000389005 TGP01266 2768 aa4.65□□□□□ -1.67
NCBP3-201ENST00000389005 LOC400499M0QZD8 3231 aa4.65□□□□□ -1.67
NCBP3-201ENST00000389005 H1FX-AS1Q4G0G2 97 aa4.65□□□□□ -1.67
NCBP3-201ENST00000389005 KRTAP10-2P60368 255 aa4.65□□□□□ -1.67
NCBP3-201ENST00000389005 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
NCBP3-201ENST00000389005 A8MU10 97 aa4.64□□□□□ -1.67
NCBP3-201ENST00000389005 SPEGQ15772 3267 aa4.63□□□□□ -1.67
NCBP3-201ENST00000389005 VWFP04275 2813 aa4.62□□□□□ -1.67
NCBP3-201ENST00000389005 ROMO1P60602 79 aa4.62□□□□□ -1.67
NCBP3-201ENST00000389005 CELSR1Q9NYQ6 3014 aa4.62□□□□□ -1.67
NCBP3-201ENST00000389005 MYO15AQ9UKN7 3530 aa4.61□□□□□ -1.67
NCBP3-201ENST00000389005 KRTAP13-1Q8IUC0 172 aa4.6□□□□□ -1.67
NCBP3-201ENST00000389005 Q6ZRN7 208 aaPredicted RBP4.6□□□□□ -1.67
NCBP3-201ENST00000389005 FBN1P35555 2871 aaKnown RBP4.59□□□□□ -1.67
NCBP3-201ENST00000389005 SPTBN5Q9NRC6 3674 aaKnown RBP4.58□□□□□ -1.68
NCBP3-201ENST00000389005 USP34Q70CQ2 3546 aa4.58□□□□□ -1.68
NCBP3-201ENST00000389005 SEC61BP60468 96 aaKnown RBP4.57□□□□□ -1.68
NCBP3-201ENST00000389005 SRRM2Q9UQ35 2752 aaKnown RBP4.56□□□□□ -1.68
NCBP3-201ENST00000389005 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
NCBP3-201ENST00000389005 R4GN34 69 aa4.54□□□□□ -1.68
NCBP3-201ENST00000389005 TENM2Q9NT68 2774 aa4.54□□□□□ -1.68
NCBP3-201ENST00000389005 KRTAP13-2Q52LG2 175 aa4.52□□□□□ -1.69
NCBP3-201ENST00000389005 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
NCBP3-201ENST00000389005 Q5VSD8 79 aa4.5□□□□□ -1.69
NCBP3-201ENST00000389005 M0QZ58 72 aa4.49□□□□□ -1.69
NCBP3-201ENST00000389005 RPS29P62273 56 aaKnown RBP4.49□□□□□ -1.69
NCBP3-201ENST00000389005 DCHS1Q96JQ0 3298 aa4.47□□□□□ -1.69
NCBP3-201ENST00000389005 M0R2T5 61 aa4.41□□□□□ -1.7
NCBP3-201ENST00000389005 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
NCBP3-201ENST00000389005 OTOGQ6ZRI0 2925 aa4.39□□□□□ -1.71
NCBP3-201ENST00000389005 FBN3Q75N90 2809 aa4.37□□□□□ -1.71
NCBP3-201ENST00000389005 A8MUU9 505 aa4.37□□□□□ -1.71
NCBP3-201ENST00000389005 WDFY3Q8IZQ1 3526 aa4.37□□□□□ -1.71
NCBP3-201ENST00000389005 C20orf166-AS1Q96NR2 134 aa4.36□□□□□ -1.71
NCBP3-201ENST00000389005 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
NCBP3-201ENST00000389005 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
NCBP3-201ENST00000389005 COL7A1Q02388 2944 aa4.33□□□□□ -1.72
NCBP3-201ENST00000389005 KRTAP1-4P0C5Y4 121 aa4.32□□□□□ -1.72
NCBP3-201ENST00000389005 H0YAA0 97 aa4.31□□□□□ -1.72
NCBP3-201ENST00000389005 RELNP78509 3460 aa4.3□□□□□ -1.72
NCBP3-201ENST00000389005 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
NCBP3-201ENST00000389005 MEGF8Q7Z7M0 2845 aa4.29□□□□□ -1.72
NCBP3-201ENST00000389005 LAMA5O15230 3695 aa4.28□□□□□ -1.72
NCBP3-201ENST00000389005 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
NCBP3-201ENST00000389005 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
NCBP3-201ENST00000389005 SMG1Q96Q15 3661 aaKnown RBP4.21□□□□□ -1.74
NCBP3-201ENST00000389005 XP32Q5T750 250 aa4.19□□□□□ -1.74
NCBP3-201ENST00000389005 CSMD1Q96PZ7 3565 aa4.19□□□□□ -1.74
NCBP3-201ENST00000389005 KRTAP21-3Q3LHN1 58 aa4.18□□□□□ -1.74
NCBP3-201ENST00000389005 ZFHX3Q15911 3703 aa4.17□□□□□ -1.74
NCBP3-201ENST00000389005 TNP1P09430 55 aa4.15□□□□□ -1.74
NCBP3-201ENST00000389005 P0C880 135 aa4.15□□□□□ -1.74
NCBP3-201ENST00000389005 ASPMQ8IZT6 3477 aa4.14□□□□□ -1.75
NCBP3-201ENST00000389005 ZFHX4Q86UP3 3567 aa4.1□□□□□ -1.75
NCBP3-201ENST00000389005 TRRAPQ9Y4A5 3859 aa4.1□□□□□ -1.75
NCBP3-201ENST00000389005 DMDP11532 3685 aa4.1□□□□□ -1.75
NCBP3-201ENST00000389005 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
NCBP3-201ENST00000389005 NBPF19A0A087WUL8 3843 aa4.08□□□□□ -1.76
NCBP3-201ENST00000389005 MUC3AQ02505 3323 aa4.07□□□□□ -1.76
NCBP3-201ENST00000389005 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
NCBP3-201ENST00000389005 CUBNO60494 3623 aa4.05□□□□□ -1.76
NCBP3-201ENST00000389005 SPENQ96T58 3664 aaKnown RBP4.05□□□□□ -1.76
NCBP3-201ENST00000389005 KRTAP10-8P60410 259 aa4.03□□□□□ -1.76
NCBP3-201ENST00000389005 SVEP1Q4LDE5 3571 aa4.02□□□□□ -1.77
NCBP3-201ENST00000389005 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
NCBP3-201ENST00000389005 KRTAP3-1Q9BYR8 98 aa3.98□□□□□ -1.77
NCBP3-201ENST00000389005 A0A1B0GVY2 172 aa3.95□□□□□ -1.78
NCBP3-201ENST00000389005 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
NCBP3-201ENST00000389005 ANK3Q12955 4377 aaKnown RBP3.93□□□□□ -1.78
NCBP3-201ENST00000389005 VPS13CQ709C8 3753 aa3.93□□□□□ -1.78
NCBP3-201ENST00000389005 KRTAP10-6P60371 365 aaPredicted RBP3.9□□□□□ -1.79
NCBP3-201ENST00000389005 CSMD2Q7Z408 3487 aa3.89□□□□□ -1.79
NCBP3-201ENST00000389005 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
NCBP3-201ENST00000389005 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
NCBP3-201ENST00000389005 AKAP9Q99996 3911 aa3.84□□□□□ -1.8
NCBP3-201ENST00000389005 BSNQ9UPA5 3926 aa3.81□□□□□ -1.8
NCBP3-201ENST00000389005 KRTAP3-2Q9BYR7 98 aa3.77□□□□□ -1.81
NCBP3-201ENST00000389005 KRTAP3-3Q9BYR6 98 aa3.74□□□□□ -1.81
NCBP3-201ENST00000389005 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
NCBP3-201ENST00000389005 CSMD3Q7Z407 3707 aa3.71□□□□□ -1.82
NCBP3-201ENST00000389005 INE1O15225 51 aa3.66□□□□□ -1.82
NCBP3-201ENST00000389005 HUWE1Q7Z6Z7 4374 aaKnown RBP3.66□□□□□ -1.82
NCBP3-201ENST00000389005 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
NCBP3-201ENST00000389005 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.83
NCBP3-201ENST00000389005 ZNF469Q96JG9 3925 aaPredicted RBP3.59□□□□□ -1.84
NCBP3-201ENST00000389005 ALMS1Q8TCU4 4167 aa3.57□□□□□ -1.84
NCBP3-201ENST00000389005 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
NCBP3-201ENST00000389005 DNAH11Q96DT5 4516 aa3.55□□□□□ -1.84
NCBP3-201ENST00000389005 DNAH1Q9P2D7 4330 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms